RNA–Protein interactions for RNA: ENST00000558449.1

AC012409.1-202, humanhuman

TSL 2 BASIC

Gene AC012409.1, Length 639 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012409.1-202ENST00000558449 CREBZFQ9NS37 354 aa14.5□□□□□ -0.09
AC012409.1-202ENST00000558449 REM2Q8IYK8 340 aaPredicted RBP14.49□□□□□ -0.09
AC012409.1-202ENST00000558449 RNF25Q96BH1 459 aaPredicted RBP14.46□□□□□ -0.09
AC012409.1-202ENST00000558449 HS6ST3Q8IZP7 471 aa14.45□□□□□ -0.1
AC012409.1-202ENST00000558449 MNX1P50219 401 aaPredicted RBP14.44□□□□□ -0.1
AC012409.1-202ENST00000558449 TSHZ2Q9NRE2 1034 aa14.44□□□□□ -0.1
AC012409.1-202ENST00000558449 FAM212AQ96EL1 285 aa14.4□□□□□ -0.1
AC012409.1-202ENST00000558449 RIOK3O14730 519 aaKnown RBP14.37□□□□□ -0.11
AC012409.1-202ENST00000558449 DNAJC5Q9H3Z4 198 aa14.36□□□□□ -0.11
AC012409.1-202ENST00000558449 TAOK2Q9UL54 1235 aa14.36□□□□□ -0.11
AC012409.1-202ENST00000558449 RASEFQ8IZ41 740 aa14.33□□□□□ -0.12
AC012409.1-202ENST00000558449 PITPNM1O00562 1244 aa14.31□□□□□ -0.12
AC012409.1-202ENST00000558449 CHRM1P11229 460 aaPredicted RBP14.31□□□□□ -0.12
AC012409.1-202ENST00000558449 VGFO15240 615 aaPredicted RBP14.27□□□□□ -0.13
AC012409.1-202ENST00000558449 NKX1-1Q15270 411 aaPredicted RBP14.26□□□□□ -0.13
AC012409.1-202ENST00000558449 STK25O00506 426 aa14.24□□□□□ -0.13
AC012409.1-202ENST00000558449 PRKCSHP14314 528 aaPredicted RBP14.24□□□□□ -0.13
AC012409.1-202ENST00000558449 PYGBP11216 843 aa14.21□□□□□ -0.13
AC012409.1-202ENST00000558449 GTPBP6O43824 516 aaPredicted RBP14.2□□□□□ -0.14
AC012409.1-202ENST00000558449 SGIP1Q9BQI5 828 aa14.2□□□□□ -0.14
AC012409.1-202ENST00000558449 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.16□□□□□ -0.14
AC012409.1-202ENST00000558449 ZFP91Q96JP5 570 aaPredicted RBP14.16□□□□□ -0.14
AC012409.1-202ENST00000558449 STK24Q9Y6E0 443 aa14.15□□□□□ -0.14
AC012409.1-202ENST00000558449 CHADLQ6NUI6 762 aa14.14□□□□□ -0.15
AC012409.1-202ENST00000558449 BCL11BQ9C0K0 894 aaPredicted RBP14.14□□□□□ -0.15
AC012409.1-202ENST00000558449 TPRNQ4KMQ1 711 aa14.09□□□□□ -0.15
AC012409.1-202ENST00000558449 TSPYL2Q9H2G4 693 aaPredicted RBP14.08□□□□□ -0.16
AC012409.1-202ENST00000558449 FARP1Q9Y4F1 1045 aaPredicted RBP14.06□□□□□ -0.16
AC012409.1-202ENST00000558449 RYDENQ9NUL5 291 aaKnown RBP14.03□□□□□ -0.16
AC012409.1-202ENST00000558449 NBR1Q14596 966 aa14.01□□□□□ -0.17
AC012409.1-202ENST00000558449 ZNF467Q7Z7K2 595 aaPredicted RBP14□□□□□ -0.17
AC012409.1-202ENST00000558449 PRKAR2AP13861 404 aaKnown RBP13.97□□□□□ -0.17
AC012409.1-202ENST00000558449 PDAP1Q13442 181 aaKnown RBP13.93□□□□□ -0.18
AC012409.1-202ENST00000558449 PCDHB8Q9UN66 801 aa13.93□□□□□ -0.18
AC012409.1-202ENST00000558449 PCDHB13Q9Y5F0 798 aa13.93□□□□□ -0.18
AC012409.1-202ENST00000558449 CCDC61Q9Y6R9 512 aa13.92□□□□□ -0.18
AC012409.1-202ENST00000558449 FXR2P51116 673 aaKnown RBP eCLIP13.91□□□□□ -0.18
AC012409.1-202ENST00000558449 ZNF579Q8NAF0 562 aaKnown RBP13.87□□□□□ -0.19
AC012409.1-202ENST00000558449 PSEN1P49768 467 aa13.86□□□□□ -0.19
AC012409.1-202ENST00000558449 PAK3O75914 559 aaPredicted RBP13.82□□□□□ -0.2
AC012409.1-202ENST00000558449 CADPS2Q86UW7 1296 aa13.77□□□□□ -0.21
AC012409.1-202ENST00000558449 IFNL1Q8IU54 200 aa13.77□□□□□ -0.21
AC012409.1-202ENST00000558449 MFRPQ9BY79 579 aa13.77□□□□□ -0.21
AC012409.1-202ENST00000558449 CHRDL2Q6WN34 429 aa13.76□□□□□ -0.21
AC012409.1-202ENST00000558449 PIP4P2Q8N4L2 257 aa13.76□□□□□ -0.21
AC012409.1-202ENST00000558449 MAP3K13O43283 966 aa13.75□□□□□ -0.21
AC012409.1-202ENST00000558449 KIF12Q96FN5 646 aa13.75□□□□□ -0.21
AC012409.1-202ENST00000558449 WDR70Q9NW82 654 aa13.74□□□□□ -0.21
AC012409.1-202ENST00000558449 P3H3Q8IVL6 736 aa13.72□□□□□ -0.21
AC012409.1-202ENST00000558449 EFCAB3Q8N7B9 438 aa13.69□□□□□ -0.22
AC012409.1-202ENST00000558449 CABP2Q9NPB3 220 aa13.68□□□□□ -0.22
AC012409.1-202ENST00000558449 SOX12O15370 315 aa13.66□□□□□ -0.22
AC012409.1-202ENST00000558449 PPP1R37O75864 691 aa13.66□□□□□ -0.22
AC012409.1-202ENST00000558449 NLRP6P59044 892 aa13.66□□□□□ -0.22
AC012409.1-202ENST00000558449 FBXO22Q8NEZ5 403 aa13.65□□□□□ -0.22
AC012409.1-202ENST00000558449 ZRANB1Q9UGI0 708 aa13.65□□□□□ -0.22
AC012409.1-202ENST00000558449 PHF8Q9UPP1 1060 aa13.64□□□□□ -0.23
AC012409.1-202ENST00000558449 KCNV2Q8TDN2 545 aa13.63□□□□□ -0.23
AC012409.1-202ENST00000558449 CD44P16070 742 aaKnown RBP13.6□□□□□ -0.23
AC012409.1-202ENST00000558449 PHF12Q96QT6 1004 aa13.58□□□□□ -0.24
AC012409.1-202ENST00000558449 E2F4Q16254 413 aa13.49□□□□□ -0.25
AC012409.1-202ENST00000558449 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.49□□□□□ -0.25
AC012409.1-202ENST00000558449 ARHGEF1Q92888 912 aaKnown RBP13.48□□□□□ -0.25
AC012409.1-202ENST00000558449 MS4A4AQ96JQ5 239 aa13.48□□□□□ -0.25
AC012409.1-202ENST00000558449 TMEM106CQ9BVX2 250 aa13.48□□□□□ -0.25
AC012409.1-202ENST00000558449 GOLGA2Q08379 1002 aa13.47□□□□□ -0.25
AC012409.1-202ENST00000558449 LMOD2Q6P5Q4 547 aa13.46□□□□□ -0.25
AC012409.1-202ENST00000558449 MS4A3Q96HJ5 214 aa13.44□□□□□ -0.26
AC012409.1-202ENST00000558449 TRPC6Q9Y210 931 aa13.44□□□□□ -0.26
AC012409.1-202ENST00000558449 NCKAP5LQ9HCH0 1330 aa13.43□□□□□ -0.26
AC012409.1-202ENST00000558449 PDE4AP27815 886 aa13.43□□□□□ -0.26
AC012409.1-202ENST00000558449 LARP6Q9BRS8 491 aaKnown RBP13.42□□□□□ -0.26
AC012409.1-202ENST00000558449 C19orf67A6NJJ6 358 aa13.41□□□□□ -0.26
AC012409.1-202ENST00000558449 MKRN3Q13064 507 aaKnown RBP13.4□□□□□ -0.26
AC012409.1-202ENST00000558449 TULP1O00294 542 aaPredicted RBP13.39□□□□□ -0.27
AC012409.1-202ENST00000558449 MFSD10Q14728 455 aa13.36□□□□□ -0.27
AC012409.1-202ENST00000558449 CRISPLD2Q9H0B8 497 aa13.36□□□□□ -0.27
AC012409.1-202ENST00000558449 SEMA3EO15041 775 aa13.35□□□□□ -0.27
AC012409.1-202ENST00000558449 TESPA1A2RU30 521 aaPredicted RBP13.33□□□□□ -0.28
AC012409.1-202ENST00000558449 TIE1P35590 1138 aa13.33□□□□□ -0.28
AC012409.1-202ENST00000558449 DDX27Q96GQ7 796 aaKnown RBP13.33□□□□□ -0.28
AC012409.1-202ENST00000558449 TTLL13PA6NNM8 815 aa13.31□□□□□ -0.28
AC012409.1-202ENST00000558449 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.28□□□□□ -0.28
AC012409.1-202ENST00000558449 ILDR1Q86SU0 546 aaPredicted RBP13.27□□□□□ -0.29
AC012409.1-202ENST00000558449 BMP2KQ9NSY1 1161 aaPredicted RBP13.27□□□□□ -0.29
AC012409.1-202ENST00000558449 ARIH1Q9Y4X5 557 aaPredicted RBP13.27□□□□□ -0.29
AC012409.1-202ENST00000558449 CAMK2BQ13554 666 aa13.26□□□□□ -0.29
AC012409.1-202ENST00000558449 ZC3H15Q8WU90 426 aaKnown RBP13.26□□□□□ -0.29
AC012409.1-202ENST00000558449 SMYD5Q6GMV2 418 aa13.23□□□□□ -0.29
AC012409.1-202ENST00000558449 TMEM132AQ24JP5 1023 aa13.22□□□□□ -0.29
AC012409.1-202ENST00000558449 TRIM35Q9UPQ4 493 aa13.22□□□□□ -0.29
AC012409.1-202ENST00000558449 GALR2O43603 387 aaPredicted RBP13.21□□□□□ -0.29
AC012409.1-202ENST00000558449 GPHNQ9NQX3 736 aaPredicted RBP13.2□□□□□ -0.3
AC012409.1-202ENST00000558449 GTF3C3Q9Y5Q9 886 aa13.19□□□□□ -0.3
AC012409.1-202ENST00000558449 PPP1R15BQ5SWA1 713 aa13.18□□□□□ -0.3
AC012409.1-202ENST00000558449 DPY19L2Q6NUT2 758 aa13.18□□□□□ -0.3
AC012409.1-202ENST00000558449 SLC24A3Q9HC58 644 aa13.14□□□□□ -0.31
AC012409.1-202ENST00000558449 HAX1O00165 279 aa13.12□□□□□ -0.31
AC012409.1-202ENST00000558449 CLCN6P51797 869 aa13.12□□□□□ -0.31
AC012409.1-202ENST00000558449 BRPF1P55201 1214 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms