RNA–Protein interactions for RNA: ENST00000554455.5

HNRNPC-211, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-211ENST00000554455 VSIG10Q8N0Z9 540 aa11.97□□□□□ -0.49
HNRNPC-211ENST00000554455 SMARCA4P51532 1647 aa11.93□□□□□ -0.5
HNRNPC-211ENST00000554455 TULP1O00294 542 aaPredicted RBP11.92□□□□□ -0.5
HNRNPC-211ENST00000554455 MIER1Q8N108 512 aa11.92□□□□□ -0.5
HNRNPC-211ENST00000554455 WRNQ14191 1432 aaPredicted RBP eCLIP11.92□□□□□ -0.5
HNRNPC-211ENST00000554455 SMARCA2P51531 1590 aa11.89□□□□□ -0.51
HNRNPC-211ENST00000554455 EEA1Q15075 1411 aa11.88□□□□□ -0.51
HNRNPC-211ENST00000554455 WASHC2CQ9Y4E1 1318 aa11.88□□□□□ -0.51
HNRNPC-211ENST00000554455 NPM2Q86SE8 214 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-211ENST00000554455 RRP9O43818 475 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-211ENST00000554455 WASHC2AQ641Q2 1341 aa11.85□□□□□ -0.51
HNRNPC-211ENST00000554455 CCDC88BA6NC98 1476 aa11.85□□□□□ -0.51
HNRNPC-211ENST00000554455 CHMP4AQ9BY43 222 aa11.83□□□□□ -0.52
HNRNPC-211ENST00000554455 AMER1Q5JTC6 1135 aaPredicted RBP11.82□□□□□ -0.52
HNRNPC-211ENST00000554455 FBXO3Q9UK99 471 aa11.82□□□□□ -0.52
HNRNPC-211ENST00000554455 UNC13AQ9UPW8 1703 aa11.81□□□□□ -0.52
HNRNPC-211ENST00000554455 TNIKQ9UKE5 1360 aa11.8□□□□□ -0.52
HNRNPC-211ENST00000554455 RTL5Q5HYW3 569 aaPredicted RBP11.8□□□□□ -0.52
HNRNPC-211ENST00000554455 NAP1L5Q96NT1 182 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-211ENST00000554455 NOP58Q9Y2X3 529 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-211ENST00000554455 ABCC8Q09428 1581 aa11.79□□□□□ -0.52
HNRNPC-211ENST00000554455 PEG3Q9GZU2 1588 aa11.78□□□□□ -0.52
HNRNPC-211ENST00000554455 CEP162Q5TB80 1403 aa11.77□□□□□ -0.52
HNRNPC-211ENST00000554455 SAMD1Q6SPF0 538 aaPredicted RBP11.77□□□□□ -0.52
HNRNPC-211ENST00000554455 CNKSR2Q8WXI2 1034 aa11.77□□□□□ -0.52
HNRNPC-211ENST00000554455 CDK11AQ9UQ88 783 aaPredicted RBP11.77□□□□□ -0.52
HNRNPC-211ENST00000554455 FAM43AQ8N2R8 423 aa11.77□□□□□ -0.53
HNRNPC-211ENST00000554455 IPO4Q8TEX9 1081 aaKnown RBP11.77□□□□□ -0.53
HNRNPC-211ENST00000554455 USP35Q9P2H5 1018 aa11.77□□□□□ -0.53
HNRNPC-211ENST00000554455 CENPJQ9HC77 1338 aaPredicted RBP11.76□□□□□ -0.53
HNRNPC-211ENST00000554455 BCCIPQ9P287 314 aaKnown RBP eCLIP11.75□□□□□ -0.53
HNRNPC-211ENST00000554455 NAP1L2Q9ULW6 460 aaPredicted RBP11.75□□□□□ -0.53
HNRNPC-211ENST00000554455 CALD1Q05682 793 aaKnown RBP11.74□□□□□ -0.53
HNRNPC-211ENST00000554455 PAXIP1Q6ZW49 1069 aaPredicted RBP11.73□□□□□ -0.53
HNRNPC-211ENST00000554455 GOLGA3Q08378 1498 aa11.72□□□□□ -0.53
HNRNPC-211ENST00000554455 EHMT2Q96KQ7 1210 aa11.71□□□□□ -0.54
HNRNPC-211ENST00000554455 SOGA1O94964 1423 aa11.7□□□□□ -0.54
HNRNPC-211ENST00000554455 KIF21BO75037 1637 aa11.69□□□□□ -0.54
HNRNPC-211ENST00000554455 CHRM1P11229 460 aaPredicted RBP11.69□□□□□ -0.54
HNRNPC-211ENST00000554455 DHX37Q8IY37 1157 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-211ENST00000554455 PRDM4Q9UKN5 801 aa11.69□□□□□ -0.54
HNRNPC-211ENST00000554455 HSP90AA2PQ14568 343 aaPredicted RBP11.68□□□□□ -0.54
HNRNPC-211ENST00000554455 BICRAQ9NZM4 1560 aa11.68□□□□□ -0.54
HNRNPC-211ENST00000554455 HSP90B1P14625 803 aaKnown RBP11.67□□□□□ -0.54
HNRNPC-211ENST00000554455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.67□□□□□ -0.54
HNRNPC-211ENST00000554455 TEX2Q8IWB9 1127 aa11.66□□□□□ -0.54
HNRNPC-211ENST00000554455 FKBP8Q14318 412 aa11.65□□□□□ -0.54
HNRNPC-211ENST00000554455 CEP164Q9UPV0 1460 aa11.65□□□□□ -0.54
HNRNPC-211ENST00000554455 C14orf37Q86TY3 774 aa11.64□□□□□ -0.55
HNRNPC-211ENST00000554455 GTF2E1P29083 439 aaPredicted RBP11.64□□□□□ -0.55
HNRNPC-211ENST00000554455 BAZ1BQ9UIG0 1483 aaKnown RBP11.63□□□□□ -0.55
HNRNPC-211ENST00000554455 NBR1Q14596 966 aa11.63□□□□□ -0.55
HNRNPC-211ENST00000554455 TAOK2Q9UL54 1235 aa11.62□□□□□ -0.55
HNRNPC-211ENST00000554455 RUSC2Q8N2Y8 1516 aa11.61□□□□□ -0.55
HNRNPC-211ENST00000554455 SYNJ1O43426 1573 aa11.6□□□□□ -0.55
HNRNPC-211ENST00000554455 BBXQ8WY36 941 aaPredicted RBP11.6□□□□□ -0.55
HNRNPC-211ENST00000554455 ARID4BQ4LE39 1312 aaPredicted RBP11.59□□□□□ -0.55
HNRNPC-211ENST00000554455 VGFO15240 615 aaPredicted RBP11.59□□□□□ -0.55
HNRNPC-211ENST00000554455 CANXP27824 592 aaKnown RBP11.58□□□□□ -0.56
HNRNPC-211ENST00000554455 BCANQ96GW7 911 aa11.58□□□□□ -0.56
HNRNPC-211ENST00000554455 PPM1GO15355 546 aaPredicted RBP11.57□□□□□ -0.56
HNRNPC-211ENST00000554455 STAC3Q96MF2 364 aa11.57□□□□□ -0.56
HNRNPC-211ENST00000554455 NCLP19338 710 aaKnown RBP11.56□□□□□ -0.56
HNRNPC-211ENST00000554455 HAP1P54257 671 aaPredicted RBP11.56□□□□□ -0.56
HNRNPC-211ENST00000554455 PABPN1Q86U42 306 aaKnown RBP eCLIP11.56□□□□□ -0.56
HNRNPC-211ENST00000554455 FTSJ3Q8IY81 847 aaKnown RBP11.56□□□□□ -0.56
HNRNPC-211ENST00000554455 CHMP4BQ9H444 224 aaKnown RBP11.56□□□□□ -0.56
HNRNPC-211ENST00000554455 ATAD2BQ9ULI0 1458 aa11.56□□□□□ -0.56
HNRNPC-211ENST00000554455 CNGB1Q14028 1251 aaPredicted RBP11.55□□□□□ -0.56
HNRNPC-211ENST00000554455 BRPF3Q9ULD4 1205 aa11.55□□□□□ -0.56
HNRNPC-211ENST00000554455 VPS8Q8N3P4 1428 aa11.55□□□□□ -0.56
HNRNPC-211ENST00000554455 HSP90AA1P07900 732 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-211ENST00000554455 ZFP91Q96JP5 570 aaPredicted RBP11.54□□□□□ -0.56
HNRNPC-211ENST00000554455 UBTFP17480 764 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-211ENST00000554455 CLIP1P30622 1438 aa11.53□□□□□ -0.56
HNRNPC-211ENST00000554455 PAK3O75914 559 aaPredicted RBP11.53□□□□□ -0.56
HNRNPC-211ENST00000554455 NEFMP07197 916 aa11.53□□□□□ -0.56
HNRNPC-211ENST00000554455 CDK11BP21127 795 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-211ENST00000554455 TOP2BQ02880 1626 aa11.51□□□□□ -0.57
HNRNPC-211ENST00000554455 IPO9Q96P70 1041 aaKnown RBP11.51□□□□□ -0.57
HNRNPC-211ENST00000554455 BIVM-ERCC5R4GMW8 1640 aa11.5□□□□□ -0.57
HNRNPC-211ENST00000554455 RNF216Q9NWF9 866 aaPredicted RBP11.5□□□□□ -0.57
HNRNPC-211ENST00000554455 ERICH3Q5RHP9 1530 aa11.49□□□□□ -0.57
HNRNPC-211ENST00000554455 PDCL3Q9H2J4 239 aa11.48□□□□□ -0.57
HNRNPC-211ENST00000554455 GSE1Q14687 1217 aa11.46□□□□□ -0.58
HNRNPC-211ENST00000554455 RAPGEF2Q9Y4G8 1499 aa11.44□□□□□ -0.58
HNRNPC-211ENST00000554455 SECISBP2LQ93073 1101 aaKnown RBP11.44□□□□□ -0.58
HNRNPC-211ENST00000554455 ARID3AQ99856 593 aa11.44□□□□□ -0.58
HNRNPC-211ENST00000554455 ANP32AP39687 249 aaKnown RBP11.43□□□□□ -0.58
HNRNPC-211ENST00000554455 HMGXB3Q12766 1538 aa11.42□□□□□ -0.58
HNRNPC-211ENST00000554455 ITGAEP38570 1179 aa11.42□□□□□ -0.58
HNRNPC-211ENST00000554455 SMAP1Q8IYB5 467 aaPredicted RBP11.41□□□□□ -0.58
HNRNPC-211ENST00000554455 PRXQ9BXM0 1461 aa11.41□□□□□ -0.58
HNRNPC-211ENST00000554455 RGS3P49796 1198 aa11.41□□□□□ -0.58
HNRNPC-211ENST00000554455 ZBTB47Q9UFB7 747 aaPredicted RBP11.41□□□□□ -0.58
HNRNPC-211ENST00000554455 UTP14CQ5TAP6 766 aaKnown RBP11.39□□□□□ -0.59
HNRNPC-211ENST00000554455 MAPK8IP2Q13387 824 aaPredicted RBP11.39□□□□□ -0.59
HNRNPC-211ENST00000554455 HMGB1P09429 215 aaKnown RBP11.38□□□□□ -0.59
HNRNPC-211ENST00000554455 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.38□□□□□ -0.59
HNRNPC-211ENST00000554455 DNAJC5Q9H3Z4 198 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms