RNA–Protein interactions for RNA: ENST00000554335.5

SAMD4A-204, Transcript of sterile alpha motif domain containing 4A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SAMD4A, Length 3,003 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4A-204ENST00000554335 RAD54L2Q9Y4B4 1467 aa22.92■■□□□ 1.26
SAMD4A-204ENST00000554335 TRIM52Q96A61 297 aa22.88■■□□□ 1.25
SAMD4A-204ENST00000554335 ERCC6Q03468 1493 aa22.87■■□□□ 1.25
SAMD4A-204ENST00000554335 PAK3O75914 559 aaPredicted RBP22.84■■□□□ 1.25
SAMD4A-204ENST00000554335 NOP58Q9Y2X3 529 aaKnown RBP22.83■■□□□ 1.25
SAMD4A-204ENST00000554335 CEP164Q9UPV0 1460 aa22.81■■□□□ 1.24
SAMD4A-204ENST00000554335 DHX57Q6P158 1386 aaKnown RBP22.81■■□□□ 1.24
SAMD4A-204ENST00000554335 TNIKQ9UKE5 1360 aa22.8■■□□□ 1.24
SAMD4A-204ENST00000554335 FGD5Q6ZNL6 1462 aa22.8■■□□□ 1.24
SAMD4A-204ENST00000554335 TDRD9Q8NDG6 1382 aaKnown RBP22.8■■□□□ 1.24
SAMD4A-204ENST00000554335 URB2Q14146 1524 aaKnown RBP22.78■■□□□ 1.24
SAMD4A-204ENST00000554335 IRX6P78412 446 aaPredicted RBP22.78■■□□□ 1.24
SAMD4A-204ENST00000554335 EIF5BO60841 1220 aaKnown RBP22.74■■□□□ 1.23
SAMD4A-204ENST00000554335 CUX2O14529 1486 aa22.73■■□□□ 1.23
SAMD4A-204ENST00000554335 PKNOX2Q96KN3 472 aa22.73■■□□□ 1.23
SAMD4A-204ENST00000554335 TOP2BQ02880 1626 aa22.72■■□□□ 1.23
SAMD4A-204ENST00000554335 PDS5BQ9NTI5 1447 aa22.71■■□□□ 1.23
SAMD4A-204ENST00000554335 TOPBP1Q92547 1522 aa22.69■■□□□ 1.22
SAMD4A-204ENST00000554335 LAMC3Q9Y6N6 1575 aa22.69■■□□□ 1.22
SAMD4A-204ENST00000554335 DDX10Q13206 875 aaKnown RBP22.68■■□□□ 1.22
SAMD4A-204ENST00000554335 RTL5Q5HYW3 569 aaPredicted RBP22.68■■□□□ 1.22
SAMD4A-204ENST00000554335 FBLN2P98095 1184 aa22.66■■□□□ 1.22
SAMD4A-204ENST00000554335 POLA1P09884 1462 aaPredicted RBP22.65■■□□□ 1.22
SAMD4A-204ENST00000554335 P3H3Q8IVL6 736 aa22.64■■□□□ 1.21
SAMD4A-204ENST00000554335 PRDM2Q13029 1718 aa22.63■■□□□ 1.21
SAMD4A-204ENST00000554335 RAPGEF2Q9Y4G8 1499 aa22.61■■□□□ 1.21
SAMD4A-204ENST00000554335 AQRO60306 1485 aaKnown RBP eCLIP22.6■■□□□ 1.21
SAMD4A-204ENST00000554335 BIVM-ERCC5R4GMW8 1640 aa22.57■■□□□ 1.2
SAMD4A-204ENST00000554335 EEA1Q15075 1411 aa22.56■■□□□ 1.2
SAMD4A-204ENST00000554335 ZNF608Q9ULD9 1512 aaPredicted RBP22.56■■□□□ 1.2
SAMD4A-204ENST00000554335 CCER2I3L3R5 266 aa22.52■■□□□ 1.2
SAMD4A-204ENST00000554335 DNMBPQ6XZF7 1577 aa22.51■■□□□ 1.19
SAMD4A-204ENST00000554335 PPP4R2Q9NY27 417 aa22.5■■□□□ 1.19
SAMD4A-204ENST00000554335 PPP1R15AO75807 674 aaPredicted RBP22.49■■□□□ 1.19
SAMD4A-204ENST00000554335 GOLGA3Q08378 1498 aa22.49■■□□□ 1.19
SAMD4A-204ENST00000554335 ARID3CA6NKF2 412 aa22.47■■□□□ 1.19
SAMD4A-204ENST00000554335 WASHC2AQ641Q2 1341 aa22.47■■□□□ 1.19
SAMD4A-204ENST00000554335 KIF27Q86VH2 1401 aa22.47■■□□□ 1.19
SAMD4A-204ENST00000554335 B4GALNT3Q6L9W6 998 aa22.46■■□□□ 1.19
SAMD4A-204ENST00000554335 MRC2Q9UBG0 1479 aa22.46■■□□□ 1.19
SAMD4A-204ENST00000554335 ATP1B4Q9UN42 357 aaPredicted RBP22.45■■□□□ 1.18
SAMD4A-204ENST00000554335 IPO9Q96P70 1041 aaKnown RBP22.44■■□□□ 1.18
SAMD4A-204ENST00000554335 C11orf95C9JLR9 678 aaPredicted RBP22.43■■□□□ 1.18
SAMD4A-204ENST00000554335 ANP32CO43423 234 aa22.42■■□□□ 1.18
SAMD4A-204ENST00000554335 PLEKHG5O94827 1062 aa22.42■■□□□ 1.18
SAMD4A-204ENST00000554335 IGF1RP08069 1367 aa22.41■■□□□ 1.18
SAMD4A-204ENST00000554335 ZBTB47Q9UFB7 747 aaPredicted RBP22.41■■□□□ 1.18
SAMD4A-204ENST00000554335 BRPF3Q9ULD4 1205 aa22.41■■□□□ 1.18
SAMD4A-204ENST00000554335 HNRNPUQ00839 825 aaKnown RBP eCLIP22.38■■□□□ 1.174e-7■■□□□ 12.7
SAMD4A-204ENST00000554335 TIMELESSQ9UNS1 1208 aa22.38■■□□□ 1.17
SAMD4A-204ENST00000554335 CLIP1P30622 1438 aa22.37■■□□□ 1.17
SAMD4A-204ENST00000554335 ANP32AP39687 249 aaKnown RBP22.37■■□□□ 1.17
SAMD4A-204ENST00000554335 WASHC2CQ9Y4E1 1318 aa22.36■■□□□ 1.17
SAMD4A-204ENST00000554335 HIRIP3Q9BW71 556 aaPredicted RBP22.34■■□□□ 1.17
SAMD4A-204ENST00000554335 VPS8Q8N3P4 1428 aa22.34■■□□□ 1.17
SAMD4A-204ENST00000554335 CARMIL1Q5VZK9 1371 aa22.34■■□□□ 1.17
SAMD4A-204ENST00000554335 KIF21BO75037 1637 aa22.31■■□□□ 1.16
SAMD4A-204ENST00000554335 THOC2Q8NI27 1593 aaKnown RBP22.3■■□□□ 1.16
SAMD4A-204ENST00000554335 GAPVD1Q14C86 1478 aa22.3■■□□□ 1.16
SAMD4A-204ENST00000554335 WDR97A6NE52 1622 aa22.29■■□□□ 1.16
SAMD4A-204ENST00000554335 NEFMP07197 916 aa22.29■■□□□ 1.16
SAMD4A-204ENST00000554335 PODXL2Q9NZ53 605 aa22.25■■□□□ 1.15
SAMD4A-204ENST00000554335 LAS1LQ9Y4W2 734 aaKnown RBP22.25■■□□□ 1.15
SAMD4A-204ENST00000554335 ABCA10Q8WWZ4 1543 aa22.24■■□□□ 1.15
SAMD4A-204ENST00000554335 TARBP1Q13395 1621 aaKnown RBP22.23■■□□□ 1.15
SAMD4A-204ENST00000554335 WDR62O43379 1518 aa22.21■■□□□ 1.15
SAMD4A-204ENST00000554335 ZMYND15Q9H091 742 aa22.21■■□□□ 1.15
SAMD4A-204ENST00000554335 RSPH6AQ9H0K4 717 aa22.2■■□□□ 1.14
SAMD4A-204ENST00000554335 USP35Q9P2H5 1018 aa22.2■■□□□ 1.14
SAMD4A-204ENST00000554335 MAPKBP1O60336 1514 aa22.2■■□□□ 1.14
SAMD4A-204ENST00000554335 PRXQ9BXM0 1461 aa22.19■■□□□ 1.14
SAMD4A-204ENST00000554335 CHMP7Q8WUX9 453 aaPredicted RBP22.18■■□□□ 1.14
SAMD4A-204ENST00000554335 SLC24A1O60721 1099 aa22.17■■□□□ 1.14
SAMD4A-204ENST00000554335 SNAPC4Q5SXM2 1469 aa22.15■■□□□ 1.14
SAMD4A-204ENST00000554335 VSIG10Q8N0Z9 540 aa22.15■■□□□ 1.14
SAMD4A-204ENST00000554335 EIF4G3O43432 1585 aaKnown RBP22.14■■□□□ 1.14
SAMD4A-204ENST00000554335 SIN3AQ96ST3 1273 aa22.13■■□□□ 1.13
SAMD4A-204ENST00000554335 GLIPR1L2Q4G1C9 344 aa22.1■■□□□ 1.13
SAMD4A-204ENST00000554335 GSE1Q14687 1217 aa22.08■■□□□ 1.13
SAMD4A-204ENST00000554335 ABCA5Q8WWZ7 1642 aa22.08■■□□□ 1.13
SAMD4A-204ENST00000554335 NPM2Q86SE8 214 aaKnown RBP22.08■■□□□ 1.12
SAMD4A-204ENST00000554335 FHOD3Q2V2M9 1422 aa22.07■■□□□ 1.12
SAMD4A-204ENST00000554335 IFT140Q96RY7 1462 aa22.06■■□□□ 1.12
SAMD4A-204ENST00000554335 PBRM1Q86U86 1689 aa22.05■■□□□ 1.12
SAMD4A-204ENST00000554335 KANK4Q5T7N3 995 aaPredicted RBP22.04■■□□□ 1.12
SAMD4A-204ENST00000554335 RRBP1Q9P2E9 1410 aaKnown RBP22.03■■□□□ 1.12
SAMD4A-204ENST00000554335 ARAP1Q96P48 1450 aa22.03■■□□□ 1.12
SAMD4A-204ENST00000554335 RAB3GAP2Q9H2M9 1393 aa22.03■■□□□ 1.12
SAMD4A-204ENST00000554335 PPM1GO15355 546 aaPredicted RBP22■■□□□ 1.11
SAMD4A-204ENST00000554335 ERICH3Q5RHP9 1530 aa21.99■■□□□ 1.11
SAMD4A-204ENST00000554335 FRAT1Q92837 279 aaPredicted RBP21.99■■□□□ 1.11
SAMD4A-204ENST00000554335 FAM43AQ8N2R8 423 aa21.98■■□□□ 1.11
SAMD4A-204ENST00000554335 GRIN2BQ13224 1484 aa21.98■■□□□ 1.11
SAMD4A-204ENST00000554335 DAXXQ9UER7 740 aaPredicted RBP21.98■■□□□ 1.11
SAMD4A-204ENST00000554335 ARHGAP35Q9NRY4 1499 aa21.95■■□□□ 1.1
SAMD4A-204ENST00000554335 CCDC184Q52MB2 194 aa21.94■■□□□ 1.1
SAMD4A-204ENST00000554335 CCNB3Q8WWL7 1395 aa21.91■■□□□ 1.1
SAMD4A-204ENST00000554335 DCAF11Q8TEB1 546 aa21.88■■□□□ 1.09
SAMD4A-204ENST00000554335 ADAMTS12P58397 1594 aa21.88■■□□□ 1.09
SAMD4A-204ENST00000554335 NFKBIBQ15653 356 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms