RNA–Protein interactions for RNA: ENST00000553932.5

LINC00639-201, long intergenic non-protein coding RNA 639, humanhuman

TSL 2 BASIC

Gene LINC00639, Length 4,496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-201ENST00000553932 ERICH6BQ5W0A0 696 aa20.07■□□□□ 0.8
LINC00639-201ENST00000553932 B4GALNT3Q6L9W6 998 aa20.07■□□□□ 0.8
LINC00639-201ENST00000553932 MRS2Q9HD23 443 aa20.06■□□□□ 0.8
LINC00639-201ENST00000553932 PPM1GO15355 546 aaPredicted RBP20.03■□□□□ 0.8
LINC00639-201ENST00000553932 SALL2Q9Y467 1007 aaPredicted RBP20.02■□□□□ 0.8
LINC00639-201ENST00000553932 GOLGA3Q08378 1498 aa20.02■□□□□ 0.8
LINC00639-201ENST00000553932 TONSLQ96HA7 1378 aa20.02■□□□□ 0.8
LINC00639-201ENST00000553932 TNIKQ9UKE5 1360 aa20.01■□□□□ 0.79
LINC00639-201ENST00000553932 EEA1Q15075 1411 aa19.99■□□□□ 0.79
LINC00639-201ENST00000553932 NAP1L5Q96NT1 182 aaPredicted RBP19.98■□□□□ 0.79
LINC00639-201ENST00000553932 TOP2AP11388 1531 aaKnown RBP19.97■□□□□ 0.79
LINC00639-201ENST00000553932 ANP32BQ92688 251 aaKnown RBP19.97■□□□□ 0.79
LINC00639-201ENST00000553932 ANO8Q9HCE9 1232 aaPredicted RBP19.96■□□□□ 0.79
LINC00639-201ENST00000553932 SMARCA4P51532 1647 aa19.95■□□□□ 0.78
LINC00639-201ENST00000553932 DDRGK1Q96HY6 314 aa19.92■□□□□ 0.78
LINC00639-201ENST00000553932 RUSC2Q8N2Y8 1516 aa19.92■□□□□ 0.78
LINC00639-201ENST00000553932 SENP3-EIF4A1A0A087X0R7 540 aa19.91■□□□□ 0.78
LINC00639-201ENST00000553932 CANXP27824 592 aaKnown RBP19.9■□□□□ 0.78
LINC00639-201ENST00000553932 ATAD2BQ9ULI0 1458 aa19.88■□□□□ 0.77
LINC00639-201ENST00000553932 CEP164Q9UPV0 1460 aa19.88■□□□□ 0.77
LINC00639-201ENST00000553932 UPF2Q9HAU5 1272 aaKnown RBP19.84■□□□□ 0.77
LINC00639-201ENST00000553932 TMC1Q8TDI8 760 aa19.84■□□□□ 0.77
LINC00639-201ENST00000553932 KIF27Q86VH2 1401 aa19.83■□□□□ 0.77
LINC00639-201ENST00000553932 KCNH8Q96L42 1107 aa19.82■□□□□ 0.76
LINC00639-201ENST00000553932 SLC4A1APQ9BWU0 796 aaKnown RBP19.8■□□□□ 0.76
LINC00639-201ENST00000553932 HSP90AA1P07900 732 aaKnown RBP19.8■□□□□ 0.76
LINC00639-201ENST00000553932 TRIM44Q96DX7 344 aaPredicted RBP19.8■□□□□ 0.76
LINC00639-201ENST00000553932 SMARCA2P51531 1590 aa19.79■□□□□ 0.76
LINC00639-201ENST00000553932 FANCIQ9NVI1 1328 aa19.77■□□□□ 0.76
LINC00639-201ENST00000553932 ZNF777Q9ULD5 760 aaPredicted RBP19.75■□□□□ 0.75
LINC00639-201ENST00000553932 CHIC2Q9UKJ5 165 aa19.75■□□□□ 0.75
LINC00639-201ENST00000553932 IPO9Q96P70 1041 aaKnown RBP19.73■□□□□ 0.75
LINC00639-201ENST00000553932 ARID4BQ4LE39 1312 aaPredicted RBP19.73■□□□□ 0.75
LINC00639-201ENST00000553932 CUX2O14529 1486 aa19.72■□□□□ 0.75
LINC00639-201ENST00000553932 CCER2I3L3R5 266 aa19.72■□□□□ 0.75
LINC00639-201ENST00000553932 SIN3AQ96ST3 1273 aa19.7■□□□□ 0.74
LINC00639-201ENST00000553932 KANK4Q5T7N3 995 aaPredicted RBP19.7■□□□□ 0.74
LINC00639-201ENST00000553932 VSIG10Q8N0Z9 540 aa19.69■□□□□ 0.74
LINC00639-201ENST00000553932 BECN1Q14457 450 aa19.66■□□□□ 0.74
LINC00639-201ENST00000553932 EIF4G2P78344 907 aaKnown RBP eCLIP19.66■□□□□ 0.74
LINC00639-201ENST00000553932 CARMIL1Q5VZK9 1371 aa19.64■□□□□ 0.74
LINC00639-201ENST00000553932 RAPGEF2Q9Y4G8 1499 aa19.64■□□□□ 0.73
LINC00639-201ENST00000553932 TIMELESSQ9UNS1 1208 aa19.64■□□□□ 0.73
LINC00639-201ENST00000553932 TNNT2P45379 298 aaPredicted RBP19.63■□□□□ 0.73
LINC00639-201ENST00000553932 MTUS2Q5JR59 1369 aa19.63■□□□□ 0.73
LINC00639-201ENST00000553932 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.61■□□□□ 0.73
LINC00639-201ENST00000553932 PNNQ9H307 717 aaKnown RBP19.6■□□□□ 0.73
LINC00639-201ENST00000553932 IL27Q8NEV9 243 aa19.59■□□□□ 0.73
LINC00639-201ENST00000553932 VPS8Q8N3P4 1428 aa19.58■□□□□ 0.73
LINC00639-201ENST00000553932 RSPH6AQ9H0K4 717 aa19.57■□□□□ 0.72
LINC00639-201ENST00000553932 CHMP7Q8WUX9 453 aaPredicted RBP19.57■□□□□ 0.72
LINC00639-201ENST00000553932 TDRD9Q8NDG6 1382 aaKnown RBP19.55■□□□□ 0.72
LINC00639-201ENST00000553932 CADPSQ9ULU8 1353 aa19.55■□□□□ 0.72
LINC00639-201ENST00000553932 RGS3P49796 1198 aa19.55■□□□□ 0.72
LINC00639-201ENST00000553932 RRP7BPQ9NSQ0 103 aa19.55■□□□□ 0.72
LINC00639-201ENST00000553932 HSP90AA2PQ14568 343 aaPredicted RBP19.52■□□□□ 0.72
LINC00639-201ENST00000553932 L1TD1Q5T7N2 865 aaKnown RBP19.52■□□□□ 0.71
LINC00639-201ENST00000553932 USP35Q9P2H5 1018 aa19.51■□□□□ 0.71
LINC00639-201ENST00000553932 PKNOX2Q96KN3 472 aa19.5■□□□□ 0.71
LINC00639-201ENST00000553932 GSE1Q14687 1217 aa19.47■□□□□ 0.71
LINC00639-201ENST00000553932 MSH5O43196 834 aa19.45■□□□□ 0.7
LINC00639-201ENST00000553932 BICRAQ9NZM4 1560 aa19.43■□□□□ 0.7
LINC00639-201ENST00000553932 TCERG1O14776 1098 aaKnown RBP19.43■□□□□ 0.7
LINC00639-201ENST00000553932 ARID3AQ99856 593 aa19.42■□□□□ 0.7
LINC00639-201ENST00000553932 CCNB3Q8WWL7 1395 aa19.42■□□□□ 0.7
LINC00639-201ENST00000553932 DNTTIP2Q5QJE6 756 aaKnown RBP19.41■□□□□ 0.7
LINC00639-201ENST00000553932 AMER1Q5JTC6 1135 aaPredicted RBP19.4■□□□□ 0.7
LINC00639-201ENST00000553932 NCLP19338 710 aaKnown RBP19.4■□□□□ 0.7
LINC00639-201ENST00000553932 EIF4G1Q04637 1599 aaKnown RBP19.4■□□□□ 0.7
LINC00639-201ENST00000553932 GZF1Q9H116 711 aaPredicted RBP19.39■□□□□ 0.7
LINC00639-201ENST00000553932 PAK3O75914 559 aaPredicted RBP19.38■□□□□ 0.69
LINC00639-201ENST00000553932 CDK11BP21127 795 aaKnown RBP19.37■□□□□ 0.69
LINC00639-201ENST00000553932 WDR43Q15061 677 aaKnown RBP eCLIP19.37■□□□□ 0.69
LINC00639-201ENST00000553932 GOLGA6L22H0YM25 854 aa19.37■□□□□ 0.69
LINC00639-201ENST00000553932 NCAPD3P42695 1498 aa19.37■□□□□ 0.69
LINC00639-201ENST00000553932 SYNJ1O43426 1573 aa19.37■□□□□ 0.69
LINC00639-201ENST00000553932 SLKQ9H2G2 1235 aaPredicted RBP19.36■□□□□ 0.69
LINC00639-201ENST00000553932 BRPF3Q9ULD4 1205 aa19.36■□□□□ 0.69
LINC00639-201ENST00000553932 PTMAP06454 111 aaKnown RBP19.35■□□□□ 0.69
LINC00639-201ENST00000553932 SLC4A3P48751 1232 aa19.35■□□□□ 0.69
LINC00639-201ENST00000553932 SPRYD3Q8NCJ5 442 aa19.33■□□□□ 0.69
LINC00639-201ENST00000553932 FANCD2Q9BXW9 1451 aa19.31■□□□□ 0.68
LINC00639-201ENST00000553932 FHOD3Q2V2M9 1422 aa19.31■□□□□ 0.68
LINC00639-201ENST00000553932 MSNP26038 577 aaKnown RBP19.3■□□□□ 0.68
LINC00639-201ENST00000553932 ERCC6Q03468 1493 aa19.3■□□□□ 0.68
LINC00639-201ENST00000553932 IGF1RP08069 1367 aa19.29■□□□□ 0.68
LINC00639-201ENST00000553932 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.29■□□□□ 0.68
LINC00639-201ENST00000553932 KDM2AQ9Y2K7 1162 aa19.29■□□□□ 0.68
LINC00639-201ENST00000553932 FHAD1B1AJZ9 1412 aa19.29■□□□□ 0.68
LINC00639-201ENST00000553932 PDE4AP27815 886 aa19.28■□□□□ 0.68
LINC00639-201ENST00000553932 PDS5BQ9NTI5 1447 aa19.27■□□□□ 0.68
LINC00639-201ENST00000553932 RAD54L2Q9Y4B4 1467 aa19.27■□□□□ 0.67
LINC00639-201ENST00000553932 GOLGA6L3A6NEY3 463 aa19.27■□□□□ 0.67
LINC00639-201ENST00000553932 DNAJC5BQ9UF47 199 aa19.25■□□□□ 0.67
LINC00639-201ENST00000553932 FGD5Q6ZNL6 1462 aa19.24■□□□□ 0.67
LINC00639-201ENST00000553932 HSPA5P11021 654 aaKnown RBP19.24■□□□□ 0.67
LINC00639-201ENST00000553932 NUDCQ9Y266 331 aa19.23■□□□□ 0.67
LINC00639-201ENST00000553932 A0A0U1RQG5 324 aaPredicted RBP19.23■□□□□ 0.67
LINC00639-201ENST00000553932 DHX57Q6P158 1386 aaKnown RBP19.23■□□□□ 0.67
LINC00639-201ENST00000553932 PPP1R15AO75807 674 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms