RNA–Protein interactions for RNA: ENST00000553660.5

CNIH1-203, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 2 BASIC

Gene CNIH1, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-203ENST00000553660 DNMBPQ6XZF7 1577 aa18.95■□□□□ 0.62
CNIH1-203ENST00000553660 IFT140Q96RY7 1462 aa18.92■□□□□ 0.62
CNIH1-203ENST00000553660 OSCARQ8IYS5 282 aa18.92■□□□□ 0.62
CNIH1-203ENST00000553660 POLA1P09884 1462 aaPredicted RBP18.82■□□□□ 0.6
CNIH1-203ENST00000553660 RBM42Q9BTD8 480 aaKnown RBP18.79■□□□□ 0.6
CNIH1-203ENST00000553660 CUX1P39880 1505 aa18.78■□□□□ 0.6
CNIH1-203ENST00000553660 TARBP1Q13395 1621 aaKnown RBP18.78■□□□□ 0.6
CNIH1-203ENST00000553660 ZNF608Q9ULD9 1512 aaPredicted RBP18.76■□□□□ 0.59
CNIH1-203ENST00000553660 SPDYE2BA6NHP3 402 aa18.76■□□□□ 0.59
CNIH1-203ENST00000553660 SPDYE6P0CI01 402 aa18.76■□□□□ 0.59
CNIH1-203ENST00000553660 SPDYE2Q495Y8 402 aa18.76■□□□□ 0.59
CNIH1-203ENST00000553660 SOGA1O94964 1423 aa18.74■□□□□ 0.59
CNIH1-203ENST00000553660 FGD5Q6ZNL6 1462 aa18.73■□□□□ 0.59
CNIH1-203ENST00000553660 WDR97A6NE52 1622 aa18.72■□□□□ 0.59
CNIH1-203ENST00000553660 SPDYE4A6NLX3 237 aa18.71■□□□□ 0.59
CNIH1-203ENST00000553660 FKBP8Q14318 412 aa18.69■□□□□ 0.58
CNIH1-203ENST00000553660 EIF4G3O43432 1585 aaKnown RBP18.68■□□□□ 0.58
CNIH1-203ENST00000553660 RAD54L2Q9Y4B4 1467 aa18.68■□□□□ 0.58
CNIH1-203ENST00000553660 ZNF692Q9BU19 519 aaPredicted RBP18.67■□□□□ 0.58
CNIH1-203ENST00000553660 WRNQ14191 1432 aaPredicted RBP eCLIP18.66■□□□□ 0.58
CNIH1-203ENST00000553660 AQRO60306 1485 aaKnown RBP eCLIP18.65■□□□□ 0.58
CNIH1-203ENST00000553660 TOP2BQ02880 1626 aa18.62■□□□□ 0.57
CNIH1-203ENST00000553660 ABCA10Q8WWZ4 1543 aa18.61■□□□□ 0.57
CNIH1-203ENST00000553660 SSUH2Q9Y2M2 353 aa18.61■□□□□ 0.57
CNIH1-203ENST00000553660 BIVM-ERCC5R4GMW8 1640 aa18.6■□□□□ 0.57
CNIH1-203ENST00000553660 TDRD9Q8NDG6 1382 aaKnown RBP18.6■□□□□ 0.57
CNIH1-203ENST00000553660 GRIN2BQ13224 1484 aa18.56■□□□□ 0.56
CNIH1-203ENST00000553660 AKT1S1Q96B36 256 aa18.55■□□□□ 0.56
CNIH1-203ENST00000553660 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
CNIH1-203ENST00000553660 MAGI1Q96QZ7 1491 aaPredicted RBP18.53■□□□□ 0.56
CNIH1-203ENST00000553660 GAPVD1Q14C86 1478 aa18.52■□□□□ 0.55
CNIH1-203ENST00000553660 ABCA5Q8WWZ7 1642 aa18.49■□□□□ 0.55
CNIH1-203ENST00000553660 SNAPC4Q5SXM2 1469 aa18.48■□□□□ 0.55
CNIH1-203ENST00000553660 SYNJ2O15056 1496 aa18.45■□□□□ 0.54
CNIH1-203ENST00000553660 CHMP7Q8WUX9 453 aaPredicted RBP18.42■□□□□ 0.54
CNIH1-203ENST00000553660 CHD1O14646 1710 aa18.41■□□□□ 0.54
CNIH1-203ENST00000553660 PROM2Q8N271 834 aa18.4■□□□□ 0.54
CNIH1-203ENST00000553660 PBRM1Q86U86 1689 aa18.4■□□□□ 0.54
CNIH1-203ENST00000553660 ERICH3Q5RHP9 1530 aa18.39■□□□□ 0.53
CNIH1-203ENST00000553660 REM2Q8IYK8 340 aaPredicted RBP18.35■□□□□ 0.53
CNIH1-203ENST00000553660 FHAD1B1AJZ9 1412 aa18.33■□□□□ 0.53
CNIH1-203ENST00000553660 CLASP1Q7Z460 1538 aa18.32■□□□□ 0.52
CNIH1-203ENST00000553660 ADAMTS12P58397 1594 aa18.31■□□□□ 0.52
CNIH1-203ENST00000553660 ARHGEF11O15085 1522 aa18.31■□□□□ 0.52
CNIH1-203ENST00000553660 GRIN2AQ12879 1464 aa18.3■□□□□ 0.52
CNIH1-203ENST00000553660 KIF27Q86VH2 1401 aa18.3■□□□□ 0.52
CNIH1-203ENST00000553660 RIMBP3CA6NJZ7 1639 aa18.28■□□□□ 0.52
CNIH1-203ENST00000553660 RIMBP3BA6NNM3 1639 aa18.28■□□□□ 0.52
CNIH1-203ENST00000553660 RIMBP3Q9UFD9 1639 aa18.28■□□□□ 0.52
CNIH1-203ENST00000553660 NUP160Q12769 1436 aa18.26■□□□□ 0.51
CNIH1-203ENST00000553660 IGF1RP08069 1367 aa18.24■□□□□ 0.51
CNIH1-203ENST00000553660 SPDYE1Q8NFV5 336 aaPredicted RBP18.22■□□□□ 0.51
CNIH1-203ENST00000553660 TRIM41Q8WV44 630 aa18.19■□□□□ 0.5
CNIH1-203ENST00000553660 CEP170Q5SW79 1584 aa18.17■□□□□ 0.5
CNIH1-203ENST00000553660 CUL7Q14999 1698 aa18.16■□□□□ 0.5
CNIH1-203ENST00000553660 ARAP1Q96P48 1450 aa18.15■□□□□ 0.5
CNIH1-203ENST00000553660 PITPNM1O00562 1244 aa18.14■□□□□ 0.49
CNIH1-203ENST00000553660 STAG3Q9UJ98 1225 aa18.13■□□□□ 0.49
CNIH1-203ENST00000553660 CYB5RLQ6IPT4 315 aa18.12■□□□□ 0.49
CNIH1-203ENST00000553660 CLEC11AQ9Y240 323 aa18.12■□□□□ 0.49
CNIH1-203ENST00000553660 CARMIL1Q5VZK9 1371 aa18.11■□□□□ 0.49
CNIH1-203ENST00000553660 SHROOM2Q13796 1616 aa18.1■□□□□ 0.49
CNIH1-203ENST00000553660 FBXO3Q9UK99 471 aa18.06■□□□□ 0.48
CNIH1-203ENST00000553660 KIAA0586Q9BVV6 1533 aa18.06■□□□□ 0.48
CNIH1-203ENST00000553660 RUSC2Q8N2Y8 1516 aa18.05■□□□□ 0.48
CNIH1-203ENST00000553660 JPH4Q96JJ6 628 aa18.05■□□□□ 0.48
CNIH1-203ENST00000553660 CHRDL2Q6WN34 429 aa18■□□□□ 0.47
CNIH1-203ENST00000553660 PRG4Q92954 1404 aaPredicted RBP17.99■□□□□ 0.47
CNIH1-203ENST00000553660 RAPGEF2Q9Y4G8 1499 aa17.99■□□□□ 0.47
CNIH1-203ENST00000553660 ERCC6L2Q5T890 1561 aa17.97■□□□□ 0.47
CNIH1-203ENST00000553660 PRR29P0C7W0 189 aa17.96■□□□□ 0.47
CNIH1-203ENST00000553660 PRXQ9BXM0 1461 aa17.94■□□□□ 0.46
CNIH1-203ENST00000553660 EEA1Q15075 1411 aa17.93■□□□□ 0.46
CNIH1-203ENST00000553660 IQGAP2Q13576 1575 aa17.88■□□□□ 0.45
CNIH1-203ENST00000553660 CARMIL2Q6F5E8 1435 aa17.86■□□□□ 0.45
CNIH1-203ENST00000553660 UGGT2Q9NYU1 1516 aa17.83■□□□□ 0.45
CNIH1-203ENST00000553660 FXR2P51116 673 aaKnown RBP eCLIP17.82■□□□□ 0.44
CNIH1-203ENST00000553660 TNIKQ9UKE5 1360 aa17.81■□□□□ 0.44
CNIH1-203ENST00000553660 VASPP50552 380 aaPredicted RBP17.8■□□□□ 0.44
CNIH1-203ENST00000553660 PTPRGP23470 1445 aa17.79■□□□□ 0.44
CNIH1-203ENST00000553660 DISP1Q96F81 1524 aa17.78■□□□□ 0.44
CNIH1-203ENST00000553660 PIP4P2Q8N4L2 257 aa17.77■□□□□ 0.44
CNIH1-203ENST00000553660 MIER1Q8N108 512 aa17.74■□□□□ 0.43
CNIH1-203ENST00000553660 GOLGA3Q08378 1498 aa17.74■□□□□ 0.43
CNIH1-203ENST00000553660 CTTNBP2Q8WZ74 1663 aa17.74■□□□□ 0.43
CNIH1-203ENST00000553660 NPM1P06748 294 aaKnown RBP eCLIP17.72■□□□□ 0.43
CNIH1-203ENST00000553660 CREBZFQ9NS37 354 aa17.72■□□□□ 0.43
CNIH1-203ENST00000553660 UHRF1BP1LA0JNW5 1464 aa17.71■□□□□ 0.43
CNIH1-203ENST00000553660 PLCD3Q8N3E9 789 aa17.71■□□□□ 0.43
CNIH1-203ENST00000553660 KIAA0556O60303 1618 aa17.7■□□□□ 0.42
CNIH1-203ENST00000553660 ADCY10Q96PN6 1610 aa17.7■□□□□ 0.42
CNIH1-203ENST00000553660 MAPKBP1O60336 1514 aa17.7■□□□□ 0.42
CNIH1-203ENST00000553660 PRKAR2AP13861 404 aaKnown RBP17.69■□□□□ 0.42
CNIH1-203ENST00000553660 PLEKHG5O94827 1062 aa17.68■□□□□ 0.42
CNIH1-203ENST00000553660 UACAQ9BZF9 1416 aa17.67■□□□□ 0.42
CNIH1-203ENST00000553660 CHADLQ6NUI6 762 aa17.67■□□□□ 0.42
CNIH1-203ENST00000553660 KIF21BO75037 1637 aa17.67■□□□□ 0.42
CNIH1-203ENST00000553660 ABCC2Q92887 1545 aa17.66■□□□□ 0.42
CNIH1-203ENST00000553660 ABCC10Q5T3U5 1492 aa17.62■□□□□ 0.41
CNIH1-203ENST00000553660 FAM9AQ8IZU1 332 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms