RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 CFAP44Q96MT7 982 aa5.11□□□□□ -1.59
CPSF6-207ENST00000551516 DCAF1Q9Y4B6 1507 aa5.11□□□□□ -1.59
CPSF6-207ENST00000551516 NPM1P06748 294 aaKnown RBP eCLIP5.1□□□□□ -1.59
CPSF6-207ENST00000551516 NUBP1P53384 320 aa5.1□□□□□ -1.59
CPSF6-207ENST00000551516 VSIG10Q8N0Z9 540 aa5.1□□□□□ -1.59
CPSF6-207ENST00000551516 TAOK2Q9UL54 1235 aa5.1□□□□□ -1.59
CPSF6-207ENST00000551516 SHROOM4Q9ULL8 1493 aa5.09□□□□□ -1.59
CPSF6-207ENST00000551516 CHGAP10645 457 aaKnown RBP5.09□□□□□ -1.59
CPSF6-207ENST00000551516 SPRYD3Q8NCJ5 442 aa5.09□□□□□ -1.59
CPSF6-207ENST00000551516 CREBZFQ9NS37 354 aa5.09□□□□□ -1.59
CPSF6-207ENST00000551516 UNC13AQ9UPW8 1703 aa5.09□□□□□ -1.6
CPSF6-207ENST00000551516 ZCCHC6Q5VYS8 1495 aaKnown RBP5.08□□□□□ -1.6
CPSF6-207ENST00000551516 FAM212AQ96EL1 285 aa5.08□□□□□ -1.6
CPSF6-207ENST00000551516 DNAJC5Q9H3Z4 198 aa5.08□□□□□ -1.6
CPSF6-207ENST00000551516 PITPNM1O00562 1244 aa5.05□□□□□ -1.6
CPSF6-207ENST00000551516 MNX1P50219 401 aaPredicted RBP5.05□□□□□ -1.6
CPSF6-207ENST00000551516 CECR2Q9BXF3 1484 aa5.05□□□□□ -1.6
CPSF6-207ENST00000551516 HS6ST3Q8IZP7 471 aa5.04□□□□□ -1.6
CPSF6-207ENST00000551516 RIOK3O14730 519 aaKnown RBP5.03□□□□□ -1.6
CPSF6-207ENST00000551516 BCANQ96GW7 911 aa5.03□□□□□ -1.6
CPSF6-207ENST00000551516 CC2D2AQ9P2K1 1620 aa5.03□□□□□ -1.6
CPSF6-207ENST00000551516 EIF4G1Q04637 1599 aaKnown RBP5.03□□□□□ -1.6
CPSF6-207ENST00000551516 VGFO15240 615 aaPredicted RBP5.02□□□□□ -1.61
CPSF6-207ENST00000551516 CHRM1P11229 460 aaPredicted RBP5.02□□□□□ -1.61
CPSF6-207ENST00000551516 POTEHQ6S545 545 aa5.02□□□□□ -1.61
CPSF6-207ENST00000551516 RASEFQ8IZ41 740 aa5.02□□□□□ -1.61
CPSF6-207ENST00000551516 RNF25Q96BH1 459 aaPredicted RBP5.02□□□□□ -1.61
CPSF6-207ENST00000551516 PYGBP11216 843 aa5□□□□□ -1.61
CPSF6-207ENST00000551516 STK25O00506 426 aa4.99□□□□□ -1.61
CPSF6-207ENST00000551516 CHADLQ6NUI6 762 aa4.99□□□□□ -1.61
CPSF6-207ENST00000551516 TSHZ2Q9NRE2 1034 aa4.99□□□□□ -1.61
CPSF6-207ENST00000551516 KDM2AQ9Y2K7 1162 aa4.99□□□□□ -1.61
CPSF6-207ENST00000551516 SGIP1Q9BQI5 828 aa4.98□□□□□ -1.61
CPSF6-207ENST00000551516 TSPYL2Q9H2G4 693 aaPredicted RBP4.97□□□□□ -1.61
CPSF6-207ENST00000551516 FARP1Q9Y4F1 1045 aaPredicted RBP4.97□□□□□ -1.61
CPSF6-207ENST00000551516 STK24Q9Y6E0 443 aa4.97□□□□□ -1.61
CPSF6-207ENST00000551516 RYDENQ9NUL5 291 aaKnown RBP4.96□□□□□ -1.62
CPSF6-207ENST00000551516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.95□□□□□ -1.62
CPSF6-207ENST00000551516 PRKAR2AP13861 404 aaKnown RBP4.95□□□□□ -1.62
CPSF6-207ENST00000551516 ZNF467Q7Z7K2 595 aaPredicted RBP4.95□□□□□ -1.62
CPSF6-207ENST00000551516 ZFP91Q96JP5 570 aaPredicted RBP4.95□□□□□ -1.62
CPSF6-207ENST00000551516 BCL11BQ9C0K0 894 aaPredicted RBP4.95□□□□□ -1.62
CPSF6-207ENST00000551516 SCRIBQ14160 1630 aa4.94□□□□□ -1.62
CPSF6-207ENST00000551516 PAK3O75914 559 aaPredicted RBP4.94□□□□□ -1.62
CPSF6-207ENST00000551516 NKX1-1Q15270 411 aaPredicted RBP4.94□□□□□ -1.62
CPSF6-207ENST00000551516 GTPBP6O43824 516 aaPredicted RBP4.93□□□□□ -1.62
CPSF6-207ENST00000551516 NCAPD3P42695 1498 aa4.93□□□□□ -1.62
CPSF6-207ENST00000551516 FXR2P51116 673 aaKnown RBP eCLIP4.92□□□□□ -1.62
CPSF6-207ENST00000551516 PDAP1Q13442 181 aaKnown RBP4.9□□□□□ -1.63
CPSF6-207ENST00000551516 CHRDL2Q6WN34 429 aa4.9□□□□□ -1.63
CPSF6-207ENST00000551516 NBR1Q14596 966 aa4.89□□□□□ -1.63
CPSF6-207ENST00000551516 ZNF579Q8NAF0 562 aaKnown RBP4.89□□□□□ -1.63
CPSF6-207ENST00000551516 CCDC61Q9Y6R9 512 aa4.89□□□□□ -1.63
CPSF6-207ENST00000551516 PCDHB8Q9UN66 801 aa4.88□□□□□ -1.63
CPSF6-207ENST00000551516 PCDHB13Q9Y5F0 798 aa4.88□□□□□ -1.63
CPSF6-207ENST00000551516 PSEN1P49768 467 aa4.87□□□□□ -1.63
CPSF6-207ENST00000551516 PIP4P2Q8N4L2 257 aa4.87□□□□□ -1.63
CPSF6-207ENST00000551516 CUX2O14529 1486 aa4.87□□□□□ -1.63
CPSF6-207ENST00000551516 ATAD2BQ9ULI0 1458 aa4.87□□□□□ -1.63
CPSF6-207ENST00000551516 MAP3K13O43283 966 aa4.84□□□□□ -1.63
CPSF6-207ENST00000551516 PRKCSHP14314 528 aaPredicted RBP4.84□□□□□ -1.63
CPSF6-207ENST00000551516 TPRNQ4KMQ1 711 aa4.84□□□□□ -1.63
CPSF6-207ENST00000551516 KIF12Q96FN5 646 aa4.84□□□□□ -1.63
CPSF6-207ENST00000551516 WDR70Q9NW82 654 aa4.84□□□□□ -1.63
CPSF6-207ENST00000551516 ZRANB1Q9UGI0 708 aa4.84□□□□□ -1.63
CPSF6-207ENST00000551516 IFNL1Q8IU54 200 aa4.83□□□□□ -1.64
CPSF6-207ENST00000551516 NESP48681 1621 aa4.83□□□□□ -1.64
CPSF6-207ENST00000551516 SOX12O15370 315 aa4.82□□□□□ -1.64
CPSF6-207ENST00000551516 CD44P16070 742 aaKnown RBP4.82□□□□□ -1.64
CPSF6-207ENST00000551516 CABP2Q9NPB3 220 aa4.82□□□□□ -1.64
CPSF6-207ENST00000551516 NLRP6P59044 892 aa4.81□□□□□ -1.64
CPSF6-207ENST00000551516 P3H3Q8IVL6 736 aa4.81□□□□□ -1.64
CPSF6-207ENST00000551516 EFCAB3Q8N7B9 438 aa4.81□□□□□ -1.64
CPSF6-207ENST00000551516 PEG3Q9GZU2 1588 aa4.8□□□□□ -1.64
CPSF6-207ENST00000551516 MFRPQ9BY79 579 aa4.8□□□□□ -1.64
CPSF6-207ENST00000551516 HMGXB3Q12766 1538 aa4.79□□□□□ -1.64
CPSF6-207ENST00000551516 GOLGA2Q08379 1002 aa4.79□□□□□ -1.64
CPSF6-207ENST00000551516 CADPS2Q86UW7 1296 aa4.77□□□□□ -1.65
CPSF6-207ENST00000551516 PHF12Q96QT6 1004 aa4.77□□□□□ -1.65
CPSF6-207ENST00000551516 PHF8Q9UPP1 1060 aa4.77□□□□□ -1.65
CPSF6-207ENST00000551516 MKRN3Q13064 507 aaKnown RBP4.76□□□□□ -1.65
CPSF6-207ENST00000551516 FBXO22Q8NEZ5 403 aa4.76□□□□□ -1.65
CPSF6-207ENST00000551516 THOC2Q8NI27 1593 aaKnown RBP4.76□□□□□ -1.65
CPSF6-207ENST00000551516 TMEM106CQ9BVX2 250 aa4.76□□□□□ -1.65
CPSF6-207ENST00000551516 C19orf67A6NJJ6 358 aa4.75□□□□□ -1.65
CPSF6-207ENST00000551516 PPP1R37O75864 691 aa4.75□□□□□ -1.65
CPSF6-207ENST00000551516 SMARCA4P51532 1647 aa4.75□□□□□ -1.65
CPSF6-207ENST00000551516 MROH2BQ7Z745 1585 aa4.74□□□□□ -1.65
CPSF6-207ENST00000551516 MS4A3Q96HJ5 214 aa4.74□□□□□ -1.65
CPSF6-207ENST00000551516 CADPSQ9ULU8 1353 aa4.74□□□□□ -1.65
CPSF6-207ENST00000551516 SMARCA2P51531 1590 aa4.74□□□□□ -1.65
CPSF6-207ENST00000551516 TULP1O00294 542 aaPredicted RBP4.73□□□□□ -1.65
CPSF6-207ENST00000551516 PDE4AP27815 886 aa4.73□□□□□ -1.65
CPSF6-207ENST00000551516 TIE1P35590 1138 aa4.73□□□□□ -1.65
CPSF6-207ENST00000551516 KCNV2Q8TDN2 545 aa4.73□□□□□ -1.65
CPSF6-207ENST00000551516 E2F4Q16254 413 aa4.72□□□□□ -1.65
CPSF6-207ENST00000551516 ERCC6Q03468 1493 aa4.72□□□□□ -1.65
CPSF6-207ENST00000551516 CLCN6P51797 869 aa4.71□□□□□ -1.66
CPSF6-207ENST00000551516 ARHGEF1Q92888 912 aaKnown RBP4.71□□□□□ -1.66
CPSF6-207ENST00000551516 TRPC6Q9Y210 931 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms