RNA–Protein interactions for RNA: ENST00000550194.5

CNOT2-224, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-224ENST00000550194 SHROOM2Q13796 1616 aa13.42□□□□□ -0.26
CNOT2-224ENST00000550194 GRIN2BQ13224 1484 aa13.4□□□□□ -0.26
CNOT2-224ENST00000550194 PCF11O94913 1555 aaKnown RBP13.39□□□□□ -0.27
CNOT2-224ENST00000550194 ADCY10Q96PN6 1610 aa13.35□□□□□ -0.27
CNOT2-224ENST00000550194 PBRM1Q86U86 1689 aa13.35□□□□□ -0.27
CNOT2-224ENST00000550194 SOGA1O94964 1423 aa13.35□□□□□ -0.27
CNOT2-224ENST00000550194 NPM1P06748 294 aaKnown RBP eCLIP13.33□□□□□ -0.28
CNOT2-224ENST00000550194 PTPRMP28827 1452 aa13.29□□□□□ -0.28
CNOT2-224ENST00000550194 NUP160Q12769 1436 aa13.27□□□□□ -0.29
CNOT2-224ENST00000550194 GRIN2AQ12879 1464 aa13.26□□□□□ -0.29
CNOT2-224ENST00000550194 KIF21BO75037 1637 aa13.25□□□□□ -0.29
CNOT2-224ENST00000550194 SRCAPQ6ZRS2 3230 aa13.25□□□□□ -0.29
CNOT2-224ENST00000550194 PRG4Q92954 1404 aaPredicted RBP13.23□□□□□ -0.29
CNOT2-224ENST00000550194 HSPA2P54652 639 aa13.22□□□□□ -0.29
CNOT2-224ENST00000550194 TOP2AP11388 1531 aaKnown RBP13.21□□□□□ -0.29
CNOT2-224ENST00000550194 ADAMTSL3P82987 1691 aa13.21□□□□□ -0.3
CNOT2-224ENST00000550194 GLI2P10070 1586 aa13.2□□□□□ -0.3
CNOT2-224ENST00000550194 FGD5Q6ZNL6 1462 aa13.2□□□□□ -0.3
CNOT2-224ENST00000550194 MAP3K4Q9Y6R4 1608 aa13.13□□□□□ -0.31
CNOT2-224ENST00000550194 MED1Q15648 1581 aaPredicted RBP13.13□□□□□ -0.31
CNOT2-224ENST00000550194 ABCA5Q8WWZ7 1642 aa13.12□□□□□ -0.31
CNOT2-224ENST00000550194 ADAMTS12P58397 1594 aa13.11□□□□□ -0.31
CNOT2-224ENST00000550194 MADDQ8WXG6 1647 aa13.09□□□□□ -0.31
CNOT2-224ENST00000550194 TEX14Q8IWB6 1497 aa13.09□□□□□ -0.31
CNOT2-224ENST00000550194 CCDC88BA6NC98 1476 aa13.08□□□□□ -0.32
CNOT2-224ENST00000550194 JPH4Q96JJ6 628 aa13.07□□□□□ -0.32
CNOT2-224ENST00000550194 ASXL2Q76L83 1435 aa13.06□□□□□ -0.32
CNOT2-224ENST00000550194 PLB1Q6P1J6 1458 aa13.04□□□□□ -0.32
CNOT2-224ENST00000550194 BCORL1Q5H9F3 1711 aa13.02□□□□□ -0.32
CNOT2-224ENST00000550194 STRCQ7RTU9 1775 aa13□□□□□ -0.33
CNOT2-224ENST00000550194 RIMS1Q86UR5 1692 aaKnown RBP13□□□□□ -0.33
CNOT2-224ENST00000550194 EPRSP07814 1512 aaKnown RBP12.99□□□□□ -0.33
CNOT2-224ENST00000550194 CUX1P39880 1505 aa12.99□□□□□ -0.33
CNOT2-224ENST00000550194 KIAA0586Q9BVV6 1533 aa12.99□□□□□ -0.33
CNOT2-224ENST00000550194 CUL7Q14999 1698 aa12.99□□□□□ -0.33
CNOT2-224ENST00000550194 LTBP4Q8N2S1 1624 aa12.97□□□□□ -0.33
CNOT2-224ENST00000550194 RUSC2Q8N2Y8 1516 aa12.97□□□□□ -0.33
CNOT2-224ENST00000550194 ABCC2Q92887 1545 aa12.97□□□□□ -0.33
CNOT2-224ENST00000550194 IQSEC2Q5JU85 1478 aa12.97□□□□□ -0.33
CNOT2-224ENST00000550194 ABCA10Q8WWZ4 1543 aa12.96□□□□□ -0.33
CNOT2-224ENST00000550194 FHAD1B1AJZ9 1412 aa12.94□□□□□ -0.34
CNOT2-224ENST00000550194 YEATS2Q9ULM3 1422 aa12.9□□□□□ -0.34
CNOT2-224ENST00000550194 PHF23Q9BUL5 403 aaPredicted RBP12.89□□□□□ -0.35
CNOT2-224ENST00000550194 PLPPR3Q6T4P5 718 aa12.86□□□□□ -0.35
CNOT2-224ENST00000550194 DMRT2Q9Y5R5 561 aa12.86□□□□□ -0.35
CNOT2-224ENST00000550194 CFAP43Q8NDM7 1665 aa12.84□□□□□ -0.35
CNOT2-224ENST00000550194 UBAP1LF5GYI3 381 aa12.83□□□□□ -0.36
CNOT2-224ENST00000550194 MAGI3Q5TCQ9 1506 aa12.83□□□□□ -0.36
CNOT2-224ENST00000550194 HSPA1LP34931 641 aa12.82□□□□□ -0.36
CNOT2-224ENST00000550194 PREX1Q8TCU6 1659 aa12.82□□□□□ -0.36
CNOT2-224ENST00000550194 PTPRGP23470 1445 aa12.81□□□□□ -0.36
CNOT2-224ENST00000550194 PTPRTO14522 1441 aa12.79□□□□□ -0.36
CNOT2-224ENST00000550194 ARID4BQ4LE39 1312 aaPredicted RBP12.78□□□□□ -0.36
CNOT2-224ENST00000550194 ARAP3Q8WWN8 1544 aa12.78□□□□□ -0.36
CNOT2-224ENST00000550194 TTBK1Q5TCY1 1321 aaPredicted RBP12.77□□□□□ -0.37
CNOT2-224ENST00000550194 UHRF1BP1LA0JNW5 1464 aa12.77□□□□□ -0.37
CNOT2-224ENST00000550194 ZCCHC11Q5TAX3 1644 aaKnown RBP12.77□□□□□ -0.37
CNOT2-224ENST00000550194 ERICH3Q5RHP9 1530 aa12.75□□□□□ -0.37
CNOT2-224ENST00000550194 CD109Q6YHK3 1445 aa12.75□□□□□ -0.37
CNOT2-224ENST00000550194 RGS17Q9UGC6 210 aaPredicted RBP12.75□□□□□ -0.37
CNOT2-224ENST00000550194 KDM5BQ9UGL1 1544 aa12.75□□□□□ -0.37
CNOT2-224ENST00000550194 SETD1AO15047 1707 aaKnown RBP12.74□□□□□ -0.37
CNOT2-224ENST00000550194 SENP3Q9H4L4 574 aaPredicted RBP12.71□□□□□ -0.37
CNOT2-224ENST00000550194 TTC37Q6PGP7 1564 aa12.71□□□□□ -0.37
CNOT2-224ENST00000550194 WDR7Q9Y4E6 1490 aa12.71□□□□□ -0.38
CNOT2-224ENST00000550194 FER1L4A9Z1Z3 1794 aa12.7□□□□□ -0.38
CNOT2-224ENST00000550194 SIGLEC1Q9BZZ2 1709 aa12.68□□□□□ -0.38
CNOT2-224ENST00000550194 UACAQ9BZF9 1416 aa12.68□□□□□ -0.38
CNOT2-224ENST00000550194 FRMPD1Q5SYB0 1578 aa12.67□□□□□ -0.38
CNOT2-224ENST00000550194 TNIKQ9UKE5 1360 aa12.67□□□□□ -0.38
CNOT2-224ENST00000550194 ARHGEF40Q8TER5 1519 aa12.64□□□□□ -0.39
CNOT2-224ENST00000550194 RAPGEF3O95398 923 aa12.64□□□□□ -0.39
CNOT2-224ENST00000550194 SCAF1Q9H7N4 1312 aaKnown RBP12.63□□□□□ -0.39
CNOT2-224ENST00000550194 SETD1BQ9UPS6 1966 aaKnown RBP12.63□□□□□ -0.39
CNOT2-224ENST00000550194 PIP4K2BP78356 416 aa12.62□□□□□ -0.39
CNOT2-224ENST00000550194 ZNF335Q9H4Z2 1342 aaPredicted RBP12.62□□□□□ -0.39
CNOT2-224ENST00000550194 POTEAQ6S8J7 498 aa12.6□□□□□ -0.39
CNOT2-224ENST00000550194 UHRF1BP1Q6BDS2 1440 aa12.6□□□□□ -0.39
CNOT2-224ENST00000550194 IFFO2Q5TF58 517 aa12.59□□□□□ -0.39
CNOT2-224ENST00000550194 WRNQ14191 1432 aaPredicted RBP eCLIP12.58□□□□□ -0.4
CNOT2-224ENST00000550194 POGZQ7Z3K3 1410 aa12.56□□□□□ -0.4
CNOT2-224ENST00000550194 CEBPAP49715 358 aaPredicted RBP12.56□□□□□ -0.4
CNOT2-224ENST00000550194 KCNH8Q96L42 1107 aa12.56□□□□□ -0.4
CNOT2-224ENST00000550194 FANCAO15360 1455 aa12.56□□□□□ -0.4
CNOT2-224ENST00000550194 NCOA1Q15788 1441 aa12.55□□□□□ -0.4
CNOT2-224ENST00000550194 CARMIL2Q6F5E8 1435 aa12.54□□□□□ -0.4
CNOT2-224ENST00000550194 UPF1Q92900 1129 aaKnown RBP eCLIP12.54□□□□□ -0.4
CNOT2-224ENST00000550194 MLECQ14165 292 aa12.52□□□□□ -0.41
CNOT2-224ENST00000550194 KIAA0556O60303 1618 aa12.51□□□□□ -0.41
CNOT2-224ENST00000550194 PHLDB1Q86UU1 1377 aa12.51□□□□□ -0.41
CNOT2-224ENST00000550194 ALKQ9UM73 1620 aa12.51□□□□□ -0.41
CNOT2-224ENST00000550194 ARHGEF12Q9NZN5 1544 aa12.5□□□□□ -0.41
CNOT2-224ENST00000550194 RICTORQ6R327 1708 aa12.48□□□□□ -0.41
CNOT2-224ENST00000550194 TOM1O60784 492 aa12.47□□□□□ -0.41
CNOT2-224ENST00000550194 DISP1Q96F81 1524 aa12.47□□□□□ -0.41
CNOT2-224ENST00000550194 NEO1Q92859 1461 aa12.45□□□□□ -0.42
CNOT2-224ENST00000550194 AKNAQ7Z591 1439 aa12.45□□□□□ -0.42
CNOT2-224ENST00000550194 CAMSAP1Q5T5Y3 1602 aa12.44□□□□□ -0.42
CNOT2-224ENST00000550194 ABCA9Q8IUA7 1624 aa12.42□□□□□ -0.42
CNOT2-224ENST00000550194 BIVM-ERCC5R4GMW8 1640 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 270.2 ms