RNA–Protein interactions for RNA: ENST00000545549.1

LINC01965-204, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 4 BASIC

Gene LINC01965, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-204ENST00000545549 ATAD2BQ9ULI0 1458 aa6.67□□□□□ -1.34
LINC01965-204ENST00000545549 PEG3Q9GZU2 1588 aa6.66□□□□□ -1.34
LINC01965-204ENST00000545549 MKRN4PQ13434 485 aaPredicted RBP6.64□□□□□ -1.35
LINC01965-204ENST00000545549 KDM6BO15054 1643 aa6.63□□□□□ -1.35
LINC01965-204ENST00000545549 SMARCA4P51532 1647 aa6.63□□□□□ -1.35
LINC01965-204ENST00000545549 MROH2BQ7Z745 1585 aa6.61□□□□□ -1.35
LINC01965-204ENST00000545549 CEP164Q9UPV0 1460 aa6.61□□□□□ -1.35
LINC01965-204ENST00000545549 FBLN2P98095 1184 aa6.59□□□□□ -1.35
LINC01965-204ENST00000545549 CERKQ8TCT0 537 aa6.59□□□□□ -1.35
LINC01965-204ENST00000545549 KIF13AQ9H1H9 1805 aa6.59□□□□□ -1.35
LINC01965-204ENST00000545549 CHD1O14646 1710 aa6.59□□□□□ -1.36
LINC01965-204ENST00000545549 CADPSQ9ULU8 1353 aa6.58□□□□□ -1.36
LINC01965-204ENST00000545549 ZBTB12Q9Y330 459 aaPredicted RBP6.58□□□□□ -1.36
LINC01965-204ENST00000545549 ZNF608Q9ULD9 1512 aaPredicted RBP6.56□□□□□ -1.36
LINC01965-204ENST00000545549 GAPVD1Q14C86 1478 aa6.56□□□□□ -1.36
LINC01965-204ENST00000545549 BAZ1BQ9UIG0 1483 aaKnown RBP6.56□□□□□ -1.36
LINC01965-204ENST00000545549 CLASP1Q7Z460 1538 aa6.55□□□□□ -1.36
LINC01965-204ENST00000545549 IFT140Q96RY7 1462 aa6.53□□□□□ -1.36
LINC01965-204ENST00000545549 FANCD2Q9BXW9 1451 aa6.51□□□□□ -1.37
LINC01965-204ENST00000545549 URB2Q14146 1524 aaKnown RBP6.5□□□□□ -1.37
LINC01965-204ENST00000545549 EIF4G3O43432 1585 aaKnown RBP6.5□□□□□ -1.37
LINC01965-204ENST00000545549 FKBP8Q14318 412 aa6.5□□□□□ -1.37
LINC01965-204ENST00000545549 ABCC10Q5T3U5 1492 aa6.49□□□□□ -1.37
LINC01965-204ENST00000545549 FAM69CQ0P6D2 419 aa6.49□□□□□ -1.37
LINC01965-204ENST00000545549 TOP2BQ02880 1626 aa6.48□□□□□ -1.37
LINC01965-204ENST00000545549 WIZO95785 1651 aa6.48□□□□□ -1.37
LINC01965-204ENST00000545549 SPDYE4A6NLX3 237 aa6.46□□□□□ -1.38
LINC01965-204ENST00000545549 SYNJ1O43426 1573 aa6.46□□□□□ -1.38
LINC01965-204ENST00000545549 IFFO2Q5TF58 517 aa6.45□□□□□ -1.38
LINC01965-204ENST00000545549 TOP2AP11388 1531 aaKnown RBP6.45□□□□□ -1.38
LINC01965-204ENST00000545549 SPDYE2BA6NHP3 402 aa6.44□□□□□ -1.38
LINC01965-204ENST00000545549 SPDYE6P0CI01 402 aa6.44□□□□□ -1.38
LINC01965-204ENST00000545549 SPDYE2Q495Y8 402 aa6.44□□□□□ -1.38
LINC01965-204ENST00000545549 ZNF692Q9BU19 519 aaPredicted RBP6.44□□□□□ -1.38
LINC01965-204ENST00000545549 DIP2BQ9P265 1576 aa6.44□□□□□ -1.38
LINC01965-204ENST00000545549 CFTRP13569 1480 aa6.42□□□□□ -1.38
LINC01965-204ENST00000545549 PCF11O94913 1555 aaKnown RBP6.42□□□□□ -1.38
LINC01965-204ENST00000545549 RBM42Q9BTD8 480 aaKnown RBP6.41□□□□□ -1.38
LINC01965-204ENST00000545549 SSUH2Q9Y2M2 353 aa6.4□□□□□ -1.38
LINC01965-204ENST00000545549 SNAPC4Q5SXM2 1469 aa6.4□□□□□ -1.39
LINC01965-204ENST00000545549 CCDC88BA6NC98 1476 aa6.38□□□□□ -1.39
LINC01965-204ENST00000545549 AQRO60306 1485 aaKnown RBP eCLIP6.38□□□□□ -1.39
LINC01965-204ENST00000545549 MED1Q15648 1581 aaPredicted RBP6.38□□□□□ -1.39
LINC01965-204ENST00000545549 MAPKBP1O60336 1514 aa6.37□□□□□ -1.39
LINC01965-204ENST00000545549 AKT1S1Q96B36 256 aa6.36□□□□□ -1.39
LINC01965-204ENST00000545549 CHMP7Q8WUX9 453 aaPredicted RBP6.34□□□□□ -1.39
LINC01965-204ENST00000545549 TSPOAP1O95153 1857 aa6.33□□□□□ -1.4
LINC01965-204ENST00000545549 REM2Q8IYK8 340 aaPredicted RBP6.33□□□□□ -1.4
LINC01965-204ENST00000545549 PROM2Q8N271 834 aa6.33□□□□□ -1.4
LINC01965-204ENST00000545549 PTPRMP28827 1452 aa6.33□□□□□ -1.4
LINC01965-204ENST00000545549 IQSEC2Q5JU85 1478 aa6.3□□□□□ -1.4
LINC01965-204ENST00000545549 NPM1P06748 294 aaKnown RBP eCLIP6.3□□□□□ -1.4
LINC01965-204ENST00000545549 COL17A1Q9UMD9 1497 aaPredicted RBP6.28□□□□□ -1.4
LINC01965-204ENST00000545549 HSPA2P54652 639 aa6.28□□□□□ -1.4
LINC01965-204ENST00000545549 TARBP1Q13395 1621 aaKnown RBP6.28□□□□□ -1.4
LINC01965-204ENST00000545549 MAGI1Q96QZ7 1491 aaPredicted RBP6.28□□□□□ -1.4
LINC01965-204ENST00000545549 PRDM2Q13029 1718 aa6.28□□□□□ -1.4
LINC01965-204ENST00000545549 PITPNM1O00562 1244 aa6.27□□□□□ -1.41
LINC01965-204ENST00000545549 CLEC11AQ9Y240 323 aa6.27□□□□□ -1.41
LINC01965-204ENST00000545549 TOPBP1Q92547 1522 aa6.26□□□□□ -1.41
LINC01965-204ENST00000545549 SPDYE1Q8NFV5 336 aaPredicted RBP6.25□□□□□ -1.41
LINC01965-204ENST00000545549 CEP170Q5SW79 1584 aa6.25□□□□□ -1.41
LINC01965-204ENST00000545549 LTBP4Q8N2S1 1624 aa6.24□□□□□ -1.41
LINC01965-204ENST00000545549 PPRC1Q5VV67 1664 aaKnown RBP6.23□□□□□ -1.41
LINC01965-204ENST00000545549 ABCC8Q09428 1581 aa6.23□□□□□ -1.41
LINC01965-204ENST00000545549 ADAMTSL3P82987 1691 aa6.21□□□□□ -1.42
LINC01965-204ENST00000545549 DNMBPQ6XZF7 1577 aa6.21□□□□□ -1.42
LINC01965-204ENST00000545549 CUX1P39880 1505 aa6.2□□□□□ -1.42
LINC01965-204ENST00000545549 PTPRTO14522 1441 aa6.2□□□□□ -1.42
LINC01965-204ENST00000545549 STAG3Q9UJ98 1225 aa6.2□□□□□ -1.42
LINC01965-204ENST00000545549 WDR97A6NE52 1622 aa6.2□□□□□ -1.42
LINC01965-204ENST00000545549 KIF21BO75037 1637 aa6.19□□□□□ -1.42
LINC01965-204ENST00000545549 PRR29P0C7W0 189 aa6.19□□□□□ -1.42
LINC01965-204ENST00000545549 CHRDL2Q6WN34 429 aa6.19□□□□□ -1.42
LINC01965-204ENST00000545549 FBXO3Q9UK99 471 aa6.19□□□□□ -1.42
LINC01965-204ENST00000545549 POLA1P09884 1462 aaPredicted RBP6.19□□□□□ -1.42
LINC01965-204ENST00000545549 TDRD9Q8NDG6 1382 aaKnown RBP6.18□□□□□ -1.42
LINC01965-204ENST00000545549 TEX14Q8IWB6 1497 aa6.18□□□□□ -1.42
LINC01965-204ENST00000545549 UBAP1LF5GYI3 381 aa6.18□□□□□ -1.42
LINC01965-204ENST00000545549 SUPT5HO00267 1087 aaKnown RBP6.18□□□□□ -1.42
LINC01965-204ENST00000545549 GLI2P10070 1586 aa6.18□□□□□ -1.42
LINC01965-204ENST00000545549 SHROOM2Q13796 1616 aa6.17□□□□□ -1.42
LINC01965-204ENST00000545549 YEATS2Q9ULM3 1422 aa6.17□□□□□ -1.42
LINC01965-204ENST00000545549 GRIN2BQ13224 1484 aa6.17□□□□□ -1.42
LINC01965-204ENST00000545549 SRCAPQ6ZRS2 3230 aa6.16□□□□□ -1.42
LINC01965-204ENST00000545549 ADCY10Q96PN6 1610 aa6.16□□□□□ -1.42
LINC01965-204ENST00000545549 HSPA1LP34931 641 aa6.15□□□□□ -1.42
LINC01965-204ENST00000545549 VASPP50552 380 aaPredicted RBP6.15□□□□□ -1.42
LINC01965-204ENST00000545549 CHADLQ6NUI6 762 aa6.15□□□□□ -1.42
LINC01965-204ENST00000545549 MIER1Q8N108 512 aa6.14□□□□□ -1.43
LINC01965-204ENST00000545549 FGD5Q6ZNL6 1462 aa6.14□□□□□ -1.43
LINC01965-204ENST00000545549 MADDQ8WXG6 1647 aa6.14□□□□□ -1.43
LINC01965-204ENST00000545549 PIP4P2Q8N4L2 257 aa6.13□□□□□ -1.43
LINC01965-204ENST00000545549 CREBZFQ9NS37 354 aa6.13□□□□□ -1.43
LINC01965-204ENST00000545549 RGS17Q9UGC6 210 aaPredicted RBP6.13□□□□□ -1.43
LINC01965-204ENST00000545549 RAD54L2Q9Y4B4 1467 aa6.13□□□□□ -1.43
LINC01965-204ENST00000545549 ABCA10Q8WWZ4 1543 aa6.13□□□□□ -1.43
LINC01965-204ENST00000545549 SOGA1O94964 1423 aa6.12□□□□□ -1.43
LINC01965-204ENST00000545549 FXR2P51116 673 aaKnown RBP eCLIP6.12□□□□□ -1.43
LINC01965-204ENST00000545549 PLCD3Q8N3E9 789 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms