RNA–Protein interactions for RNA: ENST00000545549.1

LINC01965-204, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 4 BASIC

Gene LINC01965, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-204ENST00000545549 AEBP2Q6ZN18 517 aaPredicted RBP11.5□□□□□ -0.57
LINC01965-204ENST00000545549 CHIC1Q5VXU3 224 aa11.18□□□□□ -0.62
LINC01965-204ENST00000545549 PHF23Q9BUL5 403 aaPredicted RBP9.88□□□□□ -0.83
LINC01965-204ENST00000545549 SENP3Q9H4L4 574 aaPredicted RBP9.68□□□□□ -0.86
LINC01965-204ENST00000545549 PLPPR3Q6T4P5 718 aa9.06□□□□□ -0.96
LINC01965-204ENST00000545549 FOXD1Q16676 465 aa9.04□□□□□ -0.96
LINC01965-204ENST00000545549 DNAJC5Q9H3Z4 198 aa8.82□□□□□ -1
LINC01965-204ENST00000545549 DNAJC5BQ9UF47 199 aa8.79□□□□□ -1
LINC01965-204ENST00000545549 PPP6R1Q9UPN7 881 aa8.74□□□□□ -1.01
LINC01965-204ENST00000545549 ADRA2BP18089 450 aa8.73□□□□□ -1.01
LINC01965-204ENST00000545549 NISCHQ9Y2I1 1504 aa8.59□□□□□ -1.03
LINC01965-204ENST00000545549 PIAS4Q8N2W9 510 aaPredicted RBP8.52□□□□□ -1.05
LINC01965-204ENST00000545549 ABCC9O60706 1549 aa8.49□□□□□ -1.05
LINC01965-204ENST00000545549 MSH5O43196 834 aa8.27□□□□□ -1.09
LINC01965-204ENST00000545549 PPP4R3CPQ6ZMV5 832 aa8.01□□□□□ -1.13
LINC01965-204ENST00000545549 TRIM41Q8WV44 630 aa8.01□□□□□ -1.13
LINC01965-204ENST00000545549 MAPK8IP2Q13387 824 aaPredicted RBP7.93□□□□□ -1.14
LINC01965-204ENST00000545549 SCAF1Q9H7N4 1312 aaKnown RBP7.88□□□□□ -1.15
LINC01965-204ENST00000545549 KCNA4P22459 653 aa7.86□□□□□ -1.15
LINC01965-204ENST00000545549 CUX2O14529 1486 aa7.78□□□□□ -1.16
LINC01965-204ENST00000545549 CECR2Q9BXF3 1484 aa7.77□□□□□ -1.17
LINC01965-204ENST00000545549 NCBP3Q53F19 620 aaKnown RBP7.76□□□□□ -1.17
LINC01965-204ENST00000545549 CNKSR2Q8WXI2 1034 aa7.76□□□□□ -1.17
LINC01965-204ENST00000545549 DMRT2Q9Y5R5 561 aa7.74□□□□□ -1.17
LINC01965-204ENST00000545549 ILDR1Q86SU0 546 aaPredicted RBP7.73□□□□□ -1.17
LINC01965-204ENST00000545549 PABPN1Q86U42 306 aaKnown RBP eCLIP7.72□□□□□ -1.17
LINC01965-204ENST00000545549 NPM3O75607 178 aaKnown RBP7.7□□□□□ -1.18
LINC01965-204ENST00000545549 RB1CC1Q8TDY2 1594 aa7.68□□□□□ -1.18
LINC01965-204ENST00000545549 CCDC180Q9P1Z9 1646 aa7.62□□□□□ -1.19
LINC01965-204ENST00000545549 CC2D2AQ9P2K1 1620 aa7.61□□□□□ -1.19
LINC01965-204ENST00000545549 RNF216Q9NWF9 866 aaPredicted RBP7.6□□□□□ -1.19
LINC01965-204ENST00000545549 POTEDQ86YR6 584 aa7.59□□□□□ -1.19
LINC01965-204ENST00000545549 HOXD11P31277 338 aaPredicted RBP7.57□□□□□ -1.2
LINC01965-204ENST00000545549 BICRAQ9NZM4 1560 aa7.47□□□□□ -1.21
LINC01965-204ENST00000545549 DCAF8L1A6NGE4 600 aa7.46□□□□□ -1.22
LINC01965-204ENST00000545549 SLC4A1APQ9BWU0 796 aaKnown RBP7.46□□□□□ -1.22
LINC01965-204ENST00000545549 ERCC6Q03468 1493 aa7.43□□□□□ -1.22
LINC01965-204ENST00000545549 UNC13AQ9UPW8 1703 aa7.41□□□□□ -1.22
LINC01965-204ENST00000545549 NACADO15069 1562 aa7.4□□□□□ -1.22
LINC01965-204ENST00000545549 EIF4G1Q04637 1599 aaKnown RBP7.38□□□□□ -1.23
LINC01965-204ENST00000545549 SHROOM4Q9ULL8 1493 aa7.36□□□□□ -1.23
LINC01965-204ENST00000545549 TRHP20396 242 aaPredicted RBP7.33□□□□□ -1.24
LINC01965-204ENST00000545549 SOCS7O14512 581 aa7.29□□□□□ -1.24
LINC01965-204ENST00000545549 EHMT2Q96KQ7 1210 aa7.29□□□□□ -1.24
LINC01965-204ENST00000545549 LMTK3Q96Q04 1460 aa7.29□□□□□ -1.24
LINC01965-204ENST00000545549 SLC4A2P04920 1241 aa7.28□□□□□ -1.24
LINC01965-204ENST00000545549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.25□□□□□ -1.25
LINC01965-204ENST00000545549 ZBTB22O15209 634 aa7.24□□□□□ -1.25
LINC01965-204ENST00000545549 MYO15BQ96JP2 1530 aa7.23□□□□□ -1.25
LINC01965-204ENST00000545549 RIMBP3CA6NJZ7 1639 aa7.21□□□□□ -1.26
LINC01965-204ENST00000545549 RIMBP3BA6NNM3 1639 aa7.21□□□□□ -1.26
LINC01965-204ENST00000545549 RIMBP3Q9UFD9 1639 aa7.21□□□□□ -1.26
LINC01965-204ENST00000545549 OSCARQ8IYS5 282 aa7.21□□□□□ -1.26
LINC01965-204ENST00000545549 FOXD4L1Q9NU39 408 aa7.19□□□□□ -1.26
LINC01965-204ENST00000545549 DCAF1Q9Y4B6 1507 aa7.18□□□□□ -1.26
LINC01965-204ENST00000545549 CSRNP3Q8WYN3 585 aa7.18□□□□□ -1.26
LINC01965-204ENST00000545549 ZCCHC6Q5VYS8 1495 aaKnown RBP7.17□□□□□ -1.26
LINC01965-204ENST00000545549 FBXO41Q8TF61 875 aa7.16□□□□□ -1.26
LINC01965-204ENST00000545549 THOC2Q8NI27 1593 aaKnown RBP7.16□□□□□ -1.26
LINC01965-204ENST00000545549 BAZ1AQ9NRL2 1556 aaPredicted RBP7.16□□□□□ -1.26
LINC01965-204ENST00000545549 U3KPZ7 1027 aaPredicted RBP7.13□□□□□ -1.27
LINC01965-204ENST00000545549 ILDR2Q71H61 639 aa7.12□□□□□ -1.27
LINC01965-204ENST00000545549 RNF39Q9H2S5 420 aa7.12□□□□□ -1.27
LINC01965-204ENST00000545549 ARHGEF11O15085 1522 aa7.11□□□□□ -1.27
LINC01965-204ENST00000545549 CYB5RLQ6IPT4 315 aa7.08□□□□□ -1.28
LINC01965-204ENST00000545549 MYCNP04198 464 aaPredicted RBP7.07□□□□□ -1.28
LINC01965-204ENST00000545549 DCAF8L2P0C7V8 631 aa7.07□□□□□ -1.28
LINC01965-204ENST00000545549 ERCC6L2Q5T890 1561 aa7.07□□□□□ -1.28
LINC01965-204ENST00000545549 DISP3Q9P2K9 1392 aa7.01□□□□□ -1.29
LINC01965-204ENST00000545549 C1QBPQ07021 282 aaKnown RBP7□□□□□ -1.29
LINC01965-204ENST00000545549 NESP48681 1621 aa7□□□□□ -1.29
LINC01965-204ENST00000545549 SMARCA2P51531 1590 aa6.99□□□□□ -1.29
LINC01965-204ENST00000545549 ARAP1Q96P48 1450 aa6.98□□□□□ -1.29
LINC01965-204ENST00000545549 KDM4FA0A1W2PPD8 638 aa6.97□□□□□ -1.29
LINC01965-204ENST00000545549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.97□□□□□ -1.29
LINC01965-204ENST00000545549 HNRNPUL2Q1KMD3 747 aaKnown RBP6.97□□□□□ -1.29
LINC01965-204ENST00000545549 SPINK5Q9NQ38 1064 aaPredicted RBP6.97□□□□□ -1.29
LINC01965-204ENST00000545549 SAMD1Q6SPF0 538 aaPredicted RBP6.96□□□□□ -1.3
LINC01965-204ENST00000545549 ATF5Q9Y2D1 282 aaPredicted RBP6.96□□□□□ -1.3
LINC01965-204ENST00000545549 CACNB1Q02641 598 aaPredicted RBP6.95□□□□□ -1.3
LINC01965-204ENST00000545549 HECW2Q9P2P5 1572 aa6.92□□□□□ -1.3
LINC01965-204ENST00000545549 CAPN15O75808 1086 aa6.92□□□□□ -1.3
LINC01965-204ENST00000545549 ATXN8OSP0DMR3 200 aa6.9□□□□□ -1.3
LINC01965-204ENST00000545549 SCRIBQ14160 1630 aa6.9□□□□□ -1.31
LINC01965-204ENST00000545549 APLP2Q06481 763 aa6.88□□□□□ -1.31
LINC01965-204ENST00000545549 KIF21AQ7Z4S6 1674 aa6.86□□□□□ -1.31
LINC01965-204ENST00000545549 WDR62O43379 1518 aa6.86□□□□□ -1.31
LINC01965-204ENST00000545549 NCAPD3P42695 1498 aa6.85□□□□□ -1.31
LINC01965-204ENST00000545549 PDS5BQ9NTI5 1447 aa6.84□□□□□ -1.31
LINC01965-204ENST00000545549 SPATA31D1Q6ZQQ2 1576 aa6.84□□□□□ -1.31
LINC01965-204ENST00000545549 LAMC3Q9Y6N6 1575 aa6.84□□□□□ -1.31
LINC01965-204ENST00000545549 MRC2Q9UBG0 1479 aa6.84□□□□□ -1.31
LINC01965-204ENST00000545549 ZNF219Q9P2Y4 722 aaPredicted RBP6.83□□□□□ -1.32
LINC01965-204ENST00000545549 SYNJ2O15056 1496 aa6.83□□□□□ -1.32
LINC01965-204ENST00000545549 ABCB7O75027 752 aa6.81□□□□□ -1.32
LINC01965-204ENST00000545549 RSF1Q96T23 1441 aaPredicted RBP6.81□□□□□ -1.32
LINC01965-204ENST00000545549 DSG3P32926 999 aa6.79□□□□□ -1.32
LINC01965-204ENST00000545549 POLA2Q14181 598 aa6.77□□□□□ -1.33
LINC01965-204ENST00000545549 HMGXB3Q12766 1538 aa6.71□□□□□ -1.33
LINC01965-204ENST00000545549 ADGRL1O94910 1474 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms