RNA–Protein interactions for RNA: ENST00000545021.2

LYSMD4-210, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-210ENST00000545021 GRIN2BQ13224 1484 aa28.31■■■□□ 2.12
LYSMD4-210ENST00000545021 CHD1O14646 1710 aa28.28■■■□□ 2.12
LYSMD4-210ENST00000545021 OSCARQ8IYS5 282 aa28.26■■■□□ 2.11
LYSMD4-210ENST00000545021 GAPVD1Q14C86 1478 aa28.22■■■□□ 2.11
LYSMD4-210ENST00000545021 TDRD9Q8NDG6 1382 aaKnown RBP28.22■■■□□ 2.11
LYSMD4-210ENST00000545021 SNAPC4Q5SXM2 1469 aa28.2■■■□□ 2.1
LYSMD4-210ENST00000545021 PRKCSHP14314 528 aaPredicted RBP28.17■■■□□ 2.1
LYSMD4-210ENST00000545021 SYNJ2O15056 1496 aa28.15■■■□□ 2.1
LYSMD4-210ENST00000545021 ERICH3Q5RHP9 1530 aa28.12■■■□□ 2.09
LYSMD4-210ENST00000545021 ADAMTS12P58397 1594 aa28.09■■■□□ 2.09
LYSMD4-210ENST00000545021 CLASP1Q7Z460 1538 aa28.08■■■□□ 2.09
LYSMD4-210ENST00000545021 RIMBP3CA6NJZ7 1639 aa27.99■■■□□ 2.07
LYSMD4-210ENST00000545021 RIMBP3BA6NNM3 1639 aa27.99■■■□□ 2.07
LYSMD4-210ENST00000545021 RIMBP3Q9UFD9 1639 aa27.99■■■□□ 2.07
LYSMD4-210ENST00000545021 FHAD1B1AJZ9 1412 aa27.97■■■□□ 2.07
LYSMD4-210ENST00000545021 ARHGEF11O15085 1522 aa27.93■■■□□ 2.06
LYSMD4-210ENST00000545021 GRIN2AQ12879 1464 aa27.92■■■□□ 2.06
LYSMD4-210ENST00000545021 CUL7Q14999 1698 aa27.89■■■□□ 2.05
LYSMD4-210ENST00000545021 NUP160Q12769 1436 aa27.88■■■□□ 2.05
LYSMD4-210ENST00000545021 CHMP7Q8WUX9 453 aaPredicted RBP27.88■■■□□ 2.05
LYSMD4-210ENST00000545021 CEP162Q5TB80 1403 aa27.87■■■□□ 2.05
LYSMD4-210ENST00000545021 KIF27Q86VH2 1401 aa27.86■■■□□ 2.05
LYSMD4-210ENST00000545021 CEP170Q5SW79 1584 aa27.79■■■□□ 2.04
LYSMD4-210ENST00000545021 SHROOM2Q13796 1616 aa27.79■■■□□ 2.04
LYSMD4-210ENST00000545021 FBLN2P98095 1184 aa27.78■■■□□ 2.04
LYSMD4-210ENST00000545021 ERICH6Q7L0X2 663 aa27.78■■■□□ 2.04
LYSMD4-210ENST00000545021 RBM19Q9Y4C8 960 aaKnown RBP27.72■■■□□ 2.03
LYSMD4-210ENST00000545021 TNIKQ9UKE5 1360 aa27.71■■■□□ 2.03
LYSMD4-210ENST00000545021 IGF1RP08069 1367 aa27.7■■■□□ 2.03
LYSMD4-210ENST00000545021 ARAP1Q96P48 1450 aa27.69■■■□□ 2.02
LYSMD4-210ENST00000545021 RUSC2Q8N2Y8 1516 aa27.66■■■□□ 2.02
LYSMD4-210ENST00000545021 HNRNPUL2Q1KMD3 747 aaKnown RBP27.55■■■□□ 2
LYSMD4-210ENST00000545021 KIAA0586Q9BVV6 1533 aa27.54■■■□□ 2
LYSMD4-210ENST00000545021 BCANQ96GW7 911 aa27.53■■■□□ 2
LYSMD4-210ENST00000545021 CARMIL1Q5VZK9 1371 aa27.52■■■□□ 2
LYSMD4-210ENST00000545021 MSH5O43196 834 aa27.51■■□□□ 1.99
LYSMD4-210ENST00000545021 FKBP8Q14318 412 aa27.5■■□□□ 1.99
LYSMD4-210ENST00000545021 MYT1LQ9UL68 1186 aa27.49■■□□□ 1.99
LYSMD4-210ENST00000545021 RAPGEF2Q9Y4G8 1499 aa27.43■■□□□ 1.98
LYSMD4-210ENST00000545021 ERCC6L2Q5T890 1561 aa27.43■■□□□ 1.98
LYSMD4-210ENST00000545021 FANCIQ9NVI1 1328 aa27.42■■□□□ 1.98
LYSMD4-210ENST00000545021 APLP2Q06481 763 aa27.4■■□□□ 1.98
LYSMD4-210ENST00000545021 EEA1Q15075 1411 aa27.39■■□□□ 1.98
LYSMD4-210ENST00000545021 PRG4Q92954 1404 aaPredicted RBP27.36■■□□□ 1.97
LYSMD4-210ENST00000545021 IQGAP2Q13576 1575 aa27.36■■□□□ 1.97
LYSMD4-210ENST00000545021 CYB5RLQ6IPT4 315 aa27.35■■□□□ 1.97
LYSMD4-210ENST00000545021 PRXQ9BXM0 1461 aa27.35■■□□□ 1.97
LYSMD4-210ENST00000545021 NEFLP07196 543 aa27.33■■□□□ 1.97
LYSMD4-210ENST00000545021 JPH4Q96JJ6 628 aa27.33■■□□□ 1.97
LYSMD4-210ENST00000545021 CTTNBP2Q8WZ74 1663 aa27.31■■□□□ 1.96
LYSMD4-210ENST00000545021 DHX57Q6P158 1386 aaKnown RBP27.31■■□□□ 1.96
LYSMD4-210ENST00000545021 UGGT2Q9NYU1 1516 aa27.29■■□□□ 1.96
LYSMD4-210ENST00000545021 GOLGA3Q08378 1498 aa27.28■■□□□ 1.96
LYSMD4-210ENST00000545021 KCNH8Q96L42 1107 aa27.26■■□□□ 1.95
LYSMD4-210ENST00000545021 UBTFP17480 764 aaKnown RBP27.24■■□□□ 1.95
LYSMD4-210ENST00000545021 CARMIL2Q6F5E8 1435 aa27.19■■□□□ 1.94
LYSMD4-210ENST00000545021 DEKP35659 375 aaKnown RBP27.18■■□□□ 1.94
LYSMD4-210ENST00000545021 ITGAEP38570 1179 aa27.15■■□□□ 1.94
LYSMD4-210ENST00000545021 DISP1Q96F81 1524 aa27.14■■□□□ 1.93
LYSMD4-210ENST00000545021 KIAA0556O60303 1618 aa27.12■■□□□ 1.93
LYSMD4-210ENST00000545021 KIF21BO75037 1637 aa27.12■■□□□ 1.93
LYSMD4-210ENST00000545021 VPS8Q8N3P4 1428 aa27.12■■□□□ 1.93
LYSMD4-210ENST00000545021 UHRF1BP1LA0JNW5 1464 aa27.09■■□□□ 1.93
LYSMD4-210ENST00000545021 ADCY10Q96PN6 1610 aa27.09■■□□□ 1.93
LYSMD4-210ENST00000545021 MAPKBP1O60336 1514 aa27.07■■□□□ 1.92
LYSMD4-210ENST00000545021 ANO8Q9HCE9 1232 aaPredicted RBP27.07■■□□□ 1.92
LYSMD4-210ENST00000545021 CLIP1P30622 1438 aa27.06■■□□□ 1.92
LYSMD4-210ENST00000545021 ERICH6BQ5W0A0 696 aa27.06■■□□□ 1.92
LYSMD4-210ENST00000545021 PTPRGP23470 1445 aa27.02■■□□□ 1.92
LYSMD4-210ENST00000545021 CDK11AQ9UQ88 783 aaPredicted RBP27.01■■□□□ 1.92
LYSMD4-210ENST00000545021 SAMD9Q5K651 1589 aa26.96■■□□□ 1.91
LYSMD4-210ENST00000545021 ABCC2Q92887 1545 aa26.96■■□□□ 1.91
LYSMD4-210ENST00000545021 CCER2I3L3R5 266 aa26.92■■□□□ 1.9
LYSMD4-210ENST00000545021 UACAQ9BZF9 1416 aa26.91■■□□□ 1.9
LYSMD4-210ENST00000545021 KIF13AQ9H1H9 1805 aa26.91■■□□□ 1.9
LYSMD4-210ENST00000545021 ABCA8O94911 1581 aa26.87■■□□□ 1.89
LYSMD4-210ENST00000545021 KDM5BQ9UGL1 1544 aa26.86■■□□□ 1.89
LYSMD4-210ENST00000545021 ABCC10Q5T3U5 1492 aa26.86■■□□□ 1.89
LYSMD4-210ENST00000545021 DIP2BQ9P265 1576 aa26.84■■□□□ 1.89
LYSMD4-210ENST00000545021 EFCAB5A4FU69 1503 aa26.84■■□□□ 1.89
LYSMD4-210ENST00000545021 NPM1P06748 294 aaKnown RBP eCLIP26.82■■□□□ 1.88
LYSMD4-210ENST00000545021 TRIM52Q96A61 297 aa26.82■■□□□ 1.88
LYSMD4-210ENST00000545021 GLI2P10070 1586 aa26.81■■□□□ 1.88
LYSMD4-210ENST00000545021 SALL2Q9Y467 1007 aaPredicted RBP26.8■■□□□ 1.88
LYSMD4-210ENST00000545021 DDX10Q13206 875 aaKnown RBP26.79■■□□□ 1.88
LYSMD4-210ENST00000545021 PLB1Q6P1J6 1458 aa26.79■■□□□ 1.88
LYSMD4-210ENST00000545021 PPP1R15AO75807 674 aaPredicted RBP26.78■■□□□ 1.88
LYSMD4-210ENST00000545021 TRHP20396 242 aaPredicted RBP26.78■■□□□ 1.88
LYSMD4-210ENST00000545021 ZCCHC11Q5TAX3 1644 aaKnown RBP26.77■■□□□ 1.88
LYSMD4-210ENST00000545021 RRBP1Q9P2E9 1410 aaKnown RBP26.73■■□□□ 1.87
LYSMD4-210ENST00000545021 NOP58Q9Y2X3 529 aaKnown RBP26.71■■□□□ 1.87
LYSMD4-210ENST00000545021 UBE2Q2Q8WVN8 375 aa26.69■■□□□ 1.86
LYSMD4-210ENST00000545021 ANP32CO43423 234 aa26.67■■□□□ 1.86
LYSMD4-210ENST00000545021 ASXL2Q76L83 1435 aa26.67■■□□□ 1.86
LYSMD4-210ENST00000545021 RAPGEF6Q8TEU7 1601 aa26.65■■□□□ 1.86
LYSMD4-210ENST00000545021 NBR1Q14596 966 aa26.61■■□□□ 1.85
LYSMD4-210ENST00000545021 PPP4R2Q9NY27 417 aa26.61■■□□□ 1.85
LYSMD4-210ENST00000545021 MAP3K4Q9Y6R4 1608 aa26.6■■□□□ 1.85
LYSMD4-210ENST00000545021 EPRSP07814 1512 aaKnown RBP26.59■■□□□ 1.85
LYSMD4-210ENST00000545021 WDR7Q9Y4E6 1490 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms