RNA–Protein interactions for RNA: ENST00000544583.6

ABR-205, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2 BASIC

Gene ABR, Length 5,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-205ENST00000544583 TMC1Q8TDI8 760 aa19.79■□□□□ 0.76
ABR-205ENST00000544583 CEP164Q9UPV0 1460 aa19.77■□□□□ 0.76
ABR-205ENST00000544583 RGL3Q3MIN7 710 aa19.76■□□□□ 0.75
ABR-205ENST00000544583 C14orf37Q86TY3 774 aa19.75■□□□□ 0.75
ABR-205ENST00000544583 WDR43Q15061 677 aaKnown RBP eCLIP19.73■□□□□ 0.75
ABR-205ENST00000544583 PLEKHG5O94827 1062 aa19.73■□□□□ 0.75
ABR-205ENST00000544583 HIRIP3Q9BW71 556 aaPredicted RBP19.71■□□□□ 0.75
ABR-205ENST00000544583 TNIKQ9UKE5 1360 aa19.7■□□□□ 0.74
ABR-205ENST00000544583 CUX2O14529 1486 aa19.69■□□□□ 0.74
ABR-205ENST00000544583 ZBTB7CA1YPR0 619 aa19.69■□□□□ 0.74
ABR-205ENST00000544583 EIF4G2P78344 907 aaKnown RBP eCLIP19.69■□□□□ 0.74
ABR-205ENST00000544583 ACIN1Q9UKV3 1341 aaKnown RBP19.68■□□□□ 0.74
ABR-205ENST00000544583 EIF4G1Q04637 1599 aaKnown RBP19.67■□□□□ 0.74
ABR-205ENST00000544583 A0A0G2JS52 829 aa19.67■□□□□ 0.74
ABR-205ENST00000544583 MRS2Q9HD23 443 aa19.66■□□□□ 0.74
ABR-205ENST00000544583 CARMIL1Q5VZK9 1371 aa19.66■□□□□ 0.74
ABR-205ENST00000544583 MYO15BQ96JP2 1530 aa19.66■□□□□ 0.74
ABR-205ENST00000544583 TRHP20396 242 aaPredicted RBP19.63■□□□□ 0.73
ABR-205ENST00000544583 FKBP8Q14318 412 aa19.61■□□□□ 0.73
ABR-205ENST00000544583 PDS5BQ9NTI5 1447 aa19.6■□□□□ 0.73
ABR-205ENST00000544583 NPM2Q86SE8 214 aaKnown RBP19.59■□□□□ 0.73
ABR-205ENST00000544583 CCNB3Q8WWL7 1395 aa19.59■□□□□ 0.73
ABR-205ENST00000544583 ANP32AP39687 249 aaKnown RBP19.58■□□□□ 0.72
ABR-205ENST00000544583 SMARCA2P51531 1590 aa19.57■□□□□ 0.72
ABR-205ENST00000544583 MROH2BQ7Z745 1585 aa19.57■□□□□ 0.72
ABR-205ENST00000544583 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.55■□□□□ 0.72
ABR-205ENST00000544583 FHAD1B1AJZ9 1412 aa19.55■□□□□ 0.72
ABR-205ENST00000544583 HAP1P54257 671 aaPredicted RBP19.54■□□□□ 0.72
ABR-205ENST00000544583 CCDC88BA6NC98 1476 aa19.54■□□□□ 0.72
ABR-205ENST00000544583 SOGA1O94964 1423 aa19.54■□□□□ 0.72
ABR-205ENST00000544583 CARD11Q9BXL7 1154 aa19.51■□□□□ 0.71
ABR-205ENST00000544583 CDCA8Q53HL2 280 aa19.5■□□□□ 0.71
ABR-205ENST00000544583 MLECQ14165 292 aa19.48■□□□□ 0.71
ABR-205ENST00000544583 TDRD9Q8NDG6 1382 aaKnown RBP19.48■□□□□ 0.71
ABR-205ENST00000544583 HSP90AA1P07900 732 aaKnown RBP19.48■□□□□ 0.71
ABR-205ENST00000544583 UPF2Q9HAU5 1272 aaKnown RBP19.48■□□□□ 0.71
ABR-205ENST00000544583 POGKQ9P215 609 aa19.46■□□□□ 0.71
ABR-205ENST00000544583 PPM1GO15355 546 aaPredicted RBP19.45■□□□□ 0.7
ABR-205ENST00000544583 KNSTRNQ9Y448 316 aa19.45■□□□□ 0.7
ABR-205ENST00000544583 CCDC136Q96JN2 1154 aa19.45■□□□□ 0.7
ABR-205ENST00000544583 CARMIL2Q6F5E8 1435 aa19.44■□□□□ 0.7
ABR-205ENST00000544583 CFAP53Q96M91 514 aa19.43■□□□□ 0.7
ABR-205ENST00000544583 LMOD2Q6P5Q4 547 aa19.42■□□□□ 0.7
ABR-205ENST00000544583 ABCC8Q09428 1581 aa19.41■□□□□ 0.7
ABR-205ENST00000544583 KANK1Q14678 1352 aa19.41■□□□□ 0.7
ABR-205ENST00000544583 MIER1Q8N108 512 aa19.41■□□□□ 0.7
ABR-205ENST00000544583 SIN3AQ96ST3 1273 aa19.4■□□□□ 0.7
ABR-205ENST00000544583 EIF5BO60841 1220 aaKnown RBP19.38■□□□□ 0.69
ABR-205ENST00000544583 MYH16Q9H6N6 1097 aa19.38■□□□□ 0.69
ABR-205ENST00000544583 GGT6Q6P531 493 aa19.35■□□□□ 0.69
ABR-205ENST00000544583 CADPSQ9ULU8 1353 aa19.35■□□□□ 0.69
ABR-205ENST00000544583 DCAF11Q8TEB1 546 aa19.32■□□□□ 0.68
ABR-205ENST00000544583 HDGFP51858 240 aaKnown RBP19.31■□□□□ 0.68
ABR-205ENST00000544583 SENP3-EIF4A1A0A087X0R7 540 aa19.31■□□□□ 0.68
ABR-205ENST00000544583 IRX6P78412 446 aaPredicted RBP19.31■□□□□ 0.68
ABR-205ENST00000544583 ARXQ96QS3 562 aa19.3■□□□□ 0.68
ABR-205ENST00000544583 TOP2AP11388 1531 aaKnown RBP19.29■□□□□ 0.68
ABR-205ENST00000544583 WIZO95785 1651 aa19.28■□□□□ 0.68
ABR-205ENST00000544583 TNNT2P45379 298 aaPredicted RBP19.28■□□□□ 0.68
ABR-205ENST00000544583 ARHGAP35Q9NRY4 1499 aa19.28■□□□□ 0.68
ABR-205ENST00000544583 NEUROD2Q15784 382 aa19.26■□□□□ 0.67
ABR-205ENST00000544583 EFCAB2Q5VUJ9 269 aa19.26■□□□□ 0.67
ABR-205ENST00000544583 MAPK8IP3Q9UPT6 1336 aa19.26■□□□□ 0.67
ABR-205ENST00000544583 NUDCQ9Y266 331 aa19.25■□□□□ 0.67
ABR-205ENST00000544583 VPS8Q8N3P4 1428 aa19.25■□□□□ 0.67
ABR-205ENST00000544583 FMN1Q68DA7 1419 aa19.24■□□□□ 0.67
ABR-205ENST00000544583 ATAD2BQ9ULI0 1458 aa19.23■□□□□ 0.67
ABR-205ENST00000544583 KANK4Q5T7N3 995 aaPredicted RBP19.23■□□□□ 0.67
ABR-205ENST00000544583 LAS1LQ9Y4W2 734 aaKnown RBP19.22■□□□□ 0.67
ABR-205ENST00000544583 SAFB2Q14151 953 aaKnown RBP eCLIP19.21■□□□□ 0.67
ABR-205ENST00000544583 CC2D1BQ5T0F9 858 aaKnown RBP19.21■□□□□ 0.67
ABR-205ENST00000544583 TMF1P82094 1093 aa19.21■□□□□ 0.67
ABR-205ENST00000544583 SRPK2P78362 688 aaKnown RBP19.2■□□□□ 0.66
ABR-205ENST00000544583 PKD2Q13563 968 aa19.2■□□□□ 0.66
ABR-205ENST00000544583 ANP32BQ92688 251 aaKnown RBP19.19■□□□□ 0.66
ABR-205ENST00000544583 U2SURPO15042 1029 aaKnown RBP19.17■□□□□ 0.66
ABR-205ENST00000544583 SOX12O15370 315 aa19.16■□□□□ 0.66
ABR-205ENST00000544583 SETD5Q9C0A6 1442 aa19.16■□□□□ 0.66
ABR-205ENST00000544583 GLIPR1L2Q4G1C9 344 aa19.16■□□□□ 0.66
ABR-205ENST00000544583 JPH4Q96JJ6 628 aa19.16■□□□□ 0.66
ABR-205ENST00000544583 STK26Q9P289 416 aa19.16■□□□□ 0.66
ABR-205ENST00000544583 FOXD1Q16676 465 aa19.15■□□□□ 0.66
ABR-205ENST00000544583 RAPGEF2Q9Y4G8 1499 aa19.14■□□□□ 0.66
ABR-205ENST00000544583 FTSJ3Q8IY81 847 aaKnown RBP19.14■□□□□ 0.65
ABR-205ENST00000544583 NUP155O75694 1391 aa19.11■□□□□ 0.65
ABR-205ENST00000544583 KIF3BO15066 747 aa19.11■□□□□ 0.65
ABR-205ENST00000544583 FHOD3Q2V2M9 1422 aa19.11■□□□□ 0.65
ABR-205ENST00000544583 ANKRD30AQ9BXX3 1397 aa19.11■□□□□ 0.65
ABR-205ENST00000544583 SMARCA4P51532 1647 aa19.11■□□□□ 0.65
ABR-205ENST00000544583 FANCD2Q9BXW9 1451 aa19.1■□□□□ 0.65
ABR-205ENST00000544583 HNRNPMP52272 730 aaKnown RBP eCLIP19.1■□□□□ 0.65
ABR-205ENST00000544583 TIMELESSQ9UNS1 1208 aa19.08■□□□□ 0.64
ABR-205ENST00000544583 NPHP1O15259 732 aa19.07■□□□□ 0.64
ABR-205ENST00000544583 PNNQ9H307 717 aaKnown RBP19.06■□□□□ 0.64
ABR-205ENST00000544583 NBR1Q14596 966 aa19.06■□□□□ 0.64
ABR-205ENST00000544583 MORC1Q86VD1 984 aa19.05■□□□□ 0.64
ABR-205ENST00000544583 SPAG9O60271 1321 aaKnown RBP19.05■□□□□ 0.64
ABR-205ENST00000544583 MPHOSPH9Q99550 1183 aa19.05■□□□□ 0.64
ABR-205ENST00000544583 FRAT1Q92837 279 aaPredicted RBP19.04■□□□□ 0.64
ABR-205ENST00000544583 HDGFL2Q7Z4V5 671 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms