RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 KIF21BO75037 1637 aa18.4■□□□□ 0.54
PCMTD1-208ENST00000544451 ATAD2BQ9ULI0 1458 aa18.38■□□□□ 0.53
PCMTD1-208ENST00000544451 CUX2O14529 1486 aa18.35■□□□□ 0.53
PCMTD1-208ENST00000544451 MTUS2Q5JR59 1369 aa18.33■□□□□ 0.53
PCMTD1-208ENST00000544451 RBM19Q9Y4C8 960 aaKnown RBP18.31■□□□□ 0.52
PCMTD1-208ENST00000544451 SETD5Q9C0A6 1442 aa18.31■□□□□ 0.52
PCMTD1-208ENST00000544451 SALL2Q9Y467 1007 aaPredicted RBP18.3■□□□□ 0.52
PCMTD1-208ENST00000544451 ARAP1Q96P48 1450 aa18.3■□□□□ 0.52
PCMTD1-208ENST00000544451 CARMIL1Q5VZK9 1371 aa18.29■□□□□ 0.52
PCMTD1-208ENST00000544451 FOXD1Q16676 465 aa18.29■□□□□ 0.52
PCMTD1-208ENST00000544451 MRS2Q9HD23 443 aa18.28■□□□□ 0.52
PCMTD1-208ENST00000544451 ZNF777Q9ULD5 760 aaPredicted RBP18.28■□□□□ 0.52
PCMTD1-208ENST00000544451 EIF4G1Q04637 1599 aaKnown RBP18.27■□□□□ 0.52
PCMTD1-208ENST00000544451 PPP1R15AO75807 674 aaPredicted RBP18.24■□□□□ 0.51
PCMTD1-208ENST00000544451 NBR1Q14596 966 aa18.23■□□□□ 0.51
PCMTD1-208ENST00000544451 B4GALNT3Q6L9W6 998 aa18.21■□□□□ 0.51
PCMTD1-208ENST00000544451 FBLN2P98095 1184 aa18.2■□□□□ 0.5
PCMTD1-208ENST00000544451 FHOD3Q2V2M9 1422 aa18.18■□□□□ 0.5
PCMTD1-208ENST00000544451 NPM2Q86SE8 214 aaKnown RBP18.18■□□□□ 0.5
PCMTD1-208ENST00000544451 EIF4G2P78344 907 aaKnown RBP eCLIP18.18■□□□□ 0.5
PCMTD1-208ENST00000544451 PHLDB1Q86UU1 1377 aa18.17■□□□□ 0.5
PCMTD1-208ENST00000544451 HSPA5P11021 654 aaKnown RBP18.14■□□□□ 0.49
PCMTD1-208ENST00000544451 KDM2AQ9Y2K7 1162 aa18.11■□□□□ 0.49
PCMTD1-208ENST00000544451 BCL11AQ9H165 835 aa18.11■□□□□ 0.49
PCMTD1-208ENST00000544451 ARHGAP35Q9NRY4 1499 aa18.1■□□□□ 0.49
PCMTD1-208ENST00000544451 IGF1RP08069 1367 aa18.09■□□□□ 0.49
PCMTD1-208ENST00000544451 SLC4A1APQ9BWU0 796 aaKnown RBP18.09■□□□□ 0.49
PCMTD1-208ENST00000544451 CCER2I3L3R5 266 aa18.09■□□□□ 0.49
PCMTD1-208ENST00000544451 PRXQ9BXM0 1461 aa18.07■□□□□ 0.48
PCMTD1-208ENST00000544451 CCDC136Q96JN2 1154 aa18.07■□□□□ 0.48
PCMTD1-208ENST00000544451 RTL5Q5HYW3 569 aaPredicted RBP18.06■□□□□ 0.48
PCMTD1-208ENST00000544451 FHAD1B1AJZ9 1412 aa18.06■□□□□ 0.48
PCMTD1-208ENST00000544451 RRBP1Q9P2E9 1410 aaKnown RBP18.06■□□□□ 0.48
PCMTD1-208ENST00000544451 TDRD9Q8NDG6 1382 aaKnown RBP18.04■□□□□ 0.48
PCMTD1-208ENST00000544451 WDR97A6NE52 1622 aa18.04■□□□□ 0.48
PCMTD1-208ENST00000544451 TMC1Q8TDI8 760 aa18.01■□□□□ 0.47
PCMTD1-208ENST00000544451 BICRAQ9NZM4 1560 aa18■□□□□ 0.47
PCMTD1-208ENST00000544451 UNC13AQ9UPW8 1703 aa18■□□□□ 0.47
PCMTD1-208ENST00000544451 L3MBTL2Q969R5 705 aa17.99■□□□□ 0.47
PCMTD1-208ENST00000544451 CUX1P39880 1505 aa17.99■□□□□ 0.47
PCMTD1-208ENST00000544451 TIMELESSQ9UNS1 1208 aa17.98■□□□□ 0.47
PCMTD1-208ENST00000544451 TOP2BQ02880 1626 aa17.98■□□□□ 0.47
PCMTD1-208ENST00000544451 CCDC184Q52MB2 194 aa17.97■□□□□ 0.47
PCMTD1-208ENST00000544451 ANP32AP39687 249 aaKnown RBP17.96■□□□□ 0.47
PCMTD1-208ENST00000544451 PPP4R2Q9NY27 417 aa17.96■□□□□ 0.47
PCMTD1-208ENST00000544451 LRRC9Q6ZRR7 1453 aa17.95■□□□□ 0.46
PCMTD1-208ENST00000544451 MYT1LQ9UL68 1186 aa17.94■□□□□ 0.46
PCMTD1-208ENST00000544451 MPHOSPH9Q99550 1183 aa17.93■□□□□ 0.46
PCMTD1-208ENST00000544451 RAD54L2Q9Y4B4 1467 aa17.93■□□□□ 0.46
PCMTD1-208ENST00000544451 DAXXQ9UER7 740 aaPredicted RBP17.92■□□□□ 0.46
PCMTD1-208ENST00000544451 ERICH3Q5RHP9 1530 aa17.91■□□□□ 0.46
PCMTD1-208ENST00000544451 FGD5Q6ZNL6 1462 aa17.91■□□□□ 0.46
PCMTD1-208ENST00000544451 CADPSQ9ULU8 1353 aa17.91■□□□□ 0.46
PCMTD1-208ENST00000544451 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.9■□□□□ 0.46
PCMTD1-208ENST00000544451 RGL3Q3MIN7 710 aa17.89■□□□□ 0.45
PCMTD1-208ENST00000544451 CCDC18Q5T9S5 1454 aa17.88■□□□□ 0.45
PCMTD1-208ENST00000544451 WASHC2AQ641Q2 1341 aa17.88■□□□□ 0.45
PCMTD1-208ENST00000544451 ZBTB47Q9UFB7 747 aaPredicted RBP17.86■□□□□ 0.45
PCMTD1-208ENST00000544451 PRKRIP1Q9H875 184 aaPredicted RBP17.82■□□□□ 0.44
PCMTD1-208ENST00000544451 MSH5O43196 834 aa17.82■□□□□ 0.44
PCMTD1-208ENST00000544451 MAPKBP1O60336 1514 aa17.82■□□□□ 0.44
PCMTD1-208ENST00000544451 CFDP1Q9UEE9 299 aaPredicted RBP17.82■□□□□ 0.44
PCMTD1-208ENST00000544451 CARD11Q9BXL7 1154 aa17.81■□□□□ 0.44
PCMTD1-208ENST00000544451 FGD6Q6ZV73 1430 aa17.8■□□□□ 0.44
PCMTD1-208ENST00000544451 TIAM1Q13009 1591 aa17.8■□□□□ 0.44
PCMTD1-208ENST00000544451 LAS1LQ9Y4W2 734 aaKnown RBP17.79■□□□□ 0.44
PCMTD1-208ENST00000544451 ZNF644Q9H582 1327 aaPredicted RBP17.79■□□□□ 0.44
PCMTD1-208ENST00000544451 FMN1Q68DA7 1419 aa17.79■□□□□ 0.44
PCMTD1-208ENST00000544451 DEKP35659 375 aaKnown RBP17.79■□□□□ 0.44
PCMTD1-208ENST00000544451 RTN4Q9NQC3 1192 aaKnown RBP17.78■□□□□ 0.44
PCMTD1-208ENST00000544451 NOP58Q9Y2X3 529 aaKnown RBP17.78■□□□□ 0.44
PCMTD1-208ENST00000544451 CFTRP13569 1480 aa17.77■□□□□ 0.44
PCMTD1-208ENST00000544451 C11orf95C9JLR9 678 aaPredicted RBP17.77■□□□□ 0.43
PCMTD1-208ENST00000544451 NCAPD3P42695 1498 aa17.77■□□□□ 0.43
PCMTD1-208ENST00000544451 FANCD2Q9BXW9 1451 aa17.75■□□□□ 0.43
PCMTD1-208ENST00000544451 PKD2Q13563 968 aa17.75■□□□□ 0.43
PCMTD1-208ENST00000544451 DCAF11Q8TEB1 546 aa17.73■□□□□ 0.43
PCMTD1-208ENST00000544451 CC2D1BQ5T0F9 858 aaKnown RBP17.73■□□□□ 0.43
PCMTD1-208ENST00000544451 TSPY4P0CV99 314 aa17.71■□□□□ 0.43
PCMTD1-208ENST00000544451 TSPY10P0CW01 314 aa17.71■□□□□ 0.43
PCMTD1-208ENST00000544451 NBPF8Q3BBV2 869 aa17.71■□□□□ 0.43
PCMTD1-208ENST00000544451 PEG3Q9GZU2 1588 aa17.71■□□□□ 0.43
PCMTD1-208ENST00000544451 UACAQ9BZF9 1416 aa17.71■□□□□ 0.43
PCMTD1-208ENST00000544451 CHMP7Q8WUX9 453 aaPredicted RBP17.7■□□□□ 0.42
PCMTD1-208ENST00000544451 NESP48681 1621 aa17.68■□□□□ 0.42
PCMTD1-208ENST00000544451 KIF7Q2M1P5 1343 aa17.68■□□□□ 0.42
PCMTD1-208ENST00000544451 SENP3Q9H4L4 574 aaPredicted RBP17.68■□□□□ 0.42
PCMTD1-208ENST00000544451 PCF11O94913 1555 aaKnown RBP17.67■□□□□ 0.42
PCMTD1-208ENST00000544451 NCOA2Q15596 1464 aa17.66■□□□□ 0.42
PCMTD1-208ENST00000544451 CASKIN1Q8WXD9 1431 aa17.64■□□□□ 0.41
PCMTD1-208ENST00000544451 MYOM3Q5VTT5 1437 aa17.64■□□□□ 0.41
PCMTD1-208ENST00000544451 CCDC7Q96M83 1385 aa17.64■□□□□ 0.41
PCMTD1-208ENST00000544451 PAK3O75914 559 aaPredicted RBP17.63■□□□□ 0.41
PCMTD1-208ENST00000544451 PTPRKQ15262 1439 aa17.63■□□□□ 0.41
PCMTD1-208ENST00000544451 BIVM-ERCC5R4GMW8 1640 aa17.63■□□□□ 0.41
PCMTD1-208ENST00000544451 DNAJC5BQ9UF47 199 aa17.63■□□□□ 0.41
PCMTD1-208ENST00000544451 NUDCQ9Y266 331 aa17.62■□□□□ 0.41
PCMTD1-208ENST00000544451 PLIN1O60240 522 aa17.61■□□□□ 0.41
PCMTD1-208ENST00000544451 ZBED9Q6R2W3 1325 aa17.61■□□□□ 0.41
PCMTD1-208ENST00000544451 FANCIQ9NVI1 1328 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms