RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 NPM2Q86SE8 214 aaKnown RBP18■□□□□ 0.47
TUBGCP2-210ENST00000543663 SALL2Q9Y467 1007 aaPredicted RBP18■□□□□ 0.47
TUBGCP2-210ENST00000543663 VPS8Q8N3P4 1428 aa17.99■□□□□ 0.47
TUBGCP2-210ENST00000543663 CADPSQ9ULU8 1353 aa17.98■□□□□ 0.47
TUBGCP2-210ENST00000543663 FAM9BQ8IZU0 186 aa17.97■□□□□ 0.47
TUBGCP2-210ENST00000543663 KIF21BO75037 1637 aa17.97■□□□□ 0.47
TUBGCP2-210ENST00000543663 SYNJ1O43426 1573 aa17.97■□□□□ 0.47
TUBGCP2-210ENST00000543663 CFTRP13569 1480 aa17.93■□□□□ 0.46
TUBGCP2-210ENST00000543663 TOP2BQ02880 1626 aa17.92■□□□□ 0.46
TUBGCP2-210ENST00000543663 SIN3AQ96ST3 1273 aa17.92■□□□□ 0.46
TUBGCP2-210ENST00000543663 RAPGEF2Q9Y4G8 1499 aa17.9■□□□□ 0.46
TUBGCP2-210ENST00000543663 RRP7BPQ9NSQ0 103 aa17.9■□□□□ 0.46
TUBGCP2-210ENST00000543663 CUX2O14529 1486 aa17.87■□□□□ 0.45
TUBGCP2-210ENST00000543663 NBR1Q14596 966 aa17.85■□□□□ 0.45
TUBGCP2-210ENST00000543663 ERICH3Q5RHP9 1530 aa17.84■□□□□ 0.45
TUBGCP2-210ENST00000543663 CARMIL1Q5VZK9 1371 aa17.81■□□□□ 0.44
TUBGCP2-210ENST00000543663 MTUS2Q5JR59 1369 aa17.81■□□□□ 0.44
TUBGCP2-210ENST00000543663 TDRD9Q8NDG6 1382 aaKnown RBP17.81■□□□□ 0.44
TUBGCP2-210ENST00000543663 TONSLQ96HA7 1378 aa17.78■□□□□ 0.44
TUBGCP2-210ENST00000543663 BIVM-ERCC5R4GMW8 1640 aa17.75■□□□□ 0.43
TUBGCP2-210ENST00000543663 PRXQ9BXM0 1461 aa17.75■□□□□ 0.43
TUBGCP2-210ENST00000543663 DNAJC5BQ9UF47 199 aa17.74■□□□□ 0.43
TUBGCP2-210ENST00000543663 CUX1P39880 1505 aa17.73■□□□□ 0.43
TUBGCP2-210ENST00000543663 FANCD2Q9BXW9 1451 aa17.73■□□□□ 0.43
TUBGCP2-210ENST00000543663 FHAD1B1AJZ9 1412 aa17.73■□□□□ 0.43
TUBGCP2-210ENST00000543663 ANP32AP39687 249 aaKnown RBP17.73■□□□□ 0.43
TUBGCP2-210ENST00000543663 PDS5BQ9NTI5 1447 aa17.71■□□□□ 0.43
TUBGCP2-210ENST00000543663 CHMP7Q8WUX9 453 aaPredicted RBP17.71■□□□□ 0.43
TUBGCP2-210ENST00000543663 EIF5BO60841 1220 aaKnown RBP17.68■□□□□ 0.42
TUBGCP2-210ENST00000543663 MRS2Q9HD23 443 aa17.68■□□□□ 0.42
TUBGCP2-210ENST00000543663 CC2D2AQ9P2K1 1620 aa17.67■□□□□ 0.42
TUBGCP2-210ENST00000543663 FGD5Q6ZNL6 1462 aa17.66■□□□□ 0.42
TUBGCP2-210ENST00000543663 IGF1RP08069 1367 aa17.66■□□□□ 0.42
TUBGCP2-210ENST00000543663 CCNB3Q8WWL7 1395 aa17.66■□□□□ 0.42
TUBGCP2-210ENST00000543663 CCDC136Q96JN2 1154 aa17.64■□□□□ 0.42
TUBGCP2-210ENST00000543663 CANXP27824 592 aaKnown RBP17.64■□□□□ 0.41
TUBGCP2-210ENST00000543663 FOXD1Q16676 465 aa17.64■□□□□ 0.41
TUBGCP2-210ENST00000543663 KDM2AQ9Y2K7 1162 aa17.64■□□□□ 0.41
TUBGCP2-210ENST00000543663 SUPT16HQ9Y5B9 1047 aaKnown RBP17.64■□□□□ 0.41
TUBGCP2-210ENST00000543663 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.63■□□□□ 0.412e-9■□□□□ 9.6
TUBGCP2-210ENST00000543663 ARXQ96QS3 562 aa17.63■□□□□ 0.41
TUBGCP2-210ENST00000543663 SENP3Q9H4L4 574 aaPredicted RBP17.61■□□□□ 0.41
TUBGCP2-210ENST00000543663 FHOD3Q2V2M9 1422 aa17.59■□□□□ 0.41
TUBGCP2-210ENST00000543663 TMC1Q8TDI8 760 aa17.58■□□□□ 0.4
TUBGCP2-210ENST00000543663 KCNH8Q96L42 1107 aa17.57■□□□□ 0.4
TUBGCP2-210ENST00000543663 RAD54L2Q9Y4B4 1467 aa17.52■□□□□ 0.4
TUBGCP2-210ENST00000543663 RAB3GAP2Q9H2M9 1393 aa17.52■□□□□ 0.39
TUBGCP2-210ENST00000543663 DNMBPQ6XZF7 1577 aa17.52■□□□□ 0.39
TUBGCP2-210ENST00000543663 ARAP1Q96P48 1450 aa17.51■□□□□ 0.39
TUBGCP2-210ENST00000543663 FMN1Q68DA7 1419 aa17.51■□□□□ 0.39
TUBGCP2-210ENST00000543663 ZBTB47Q9UFB7 747 aaPredicted RBP17.51■□□□□ 0.39
TUBGCP2-210ENST00000543663 SLC24A1O60721 1099 aa17.5■□□□□ 0.39
TUBGCP2-210ENST00000543663 ANP32EQ9BTT0 268 aa17.5■□□□□ 0.39
TUBGCP2-210ENST00000543663 ARHGAP35Q9NRY4 1499 aa17.48■□□□□ 0.39
TUBGCP2-210ENST00000543663 RGL3Q3MIN7 710 aa17.48■□□□□ 0.39
TUBGCP2-210ENST00000543663 TOPBP1Q92547 1522 aa17.47■□□□□ 0.39
TUBGCP2-210ENST00000543663 LAMC3Q9Y6N6 1575 aa17.46■□□□□ 0.39
TUBGCP2-210ENST00000543663 CHGAP10645 457 aaKnown RBP17.46■□□□□ 0.38
TUBGCP2-210ENST00000543663 NESP48681 1621 aa17.45■□□□□ 0.38
TUBGCP2-210ENST00000543663 CFDP1Q9UEE9 299 aaPredicted RBP17.45■□□□□ 0.38
TUBGCP2-210ENST00000543663 PRDM2Q13029 1718 aa17.44■□□□□ 0.38
TUBGCP2-210ENST00000543663 ABCA10Q8WWZ4 1543 aa17.44■□□□□ 0.38
TUBGCP2-210ENST00000543663 B4GALNT3Q6L9W6 998 aa17.44■□□□□ 0.38
TUBGCP2-210ENST00000543663 EIF4G2P78344 907 aaKnown RBP eCLIP17.43■□□□□ 0.38
TUBGCP2-210ENST00000543663 POLA1P09884 1462 aaPredicted RBP17.42■□□□□ 0.38
TUBGCP2-210ENST00000543663 DHX57Q6P158 1386 aaKnown RBP17.41■□□□□ 0.38
TUBGCP2-210ENST00000543663 RTN4Q9NQC3 1192 aaKnown RBP17.4■□□□□ 0.38
TUBGCP2-210ENST00000543663 TSPY4P0CV99 314 aa17.4■□□□□ 0.38
TUBGCP2-210ENST00000543663 TSPY10P0CW01 314 aa17.4■□□□□ 0.38
TUBGCP2-210ENST00000543663 RRBP1Q9P2E9 1410 aaKnown RBP17.4■□□□□ 0.38
TUBGCP2-210ENST00000543663 GAPVD1Q14C86 1478 aa17.39■□□□□ 0.37
TUBGCP2-210ENST00000543663 EFCAB5A4FU69 1503 aa17.39■□□□□ 0.37
TUBGCP2-210ENST00000543663 PLEKHD1A6NEE1 506 aa17.37■□□□□ 0.37
TUBGCP2-210ENST00000543663 MAP3K1Q13233 1512 aa17.37■□□□□ 0.37
TUBGCP2-210ENST00000543663 SETD5Q9C0A6 1442 aa17.37■□□□□ 0.37
TUBGCP2-210ENST00000543663 ERCC6Q03468 1493 aa17.36■□□□□ 0.37
TUBGCP2-210ENST00000543663 TIMELESSQ9UNS1 1208 aa17.34■□□□□ 0.37
TUBGCP2-210ENST00000543663 CUL7Q14999 1698 aa17.34■□□□□ 0.37
TUBGCP2-210ENST00000543663 LRRC9Q6ZRR7 1453 aa17.32■□□□□ 0.36
TUBGCP2-210ENST00000543663 PHLDB1Q86UU1 1377 aa17.31■□□□□ 0.36
TUBGCP2-210ENST00000543663 CASKIN1Q8WXD9 1431 aa17.31■□□□□ 0.36
TUBGCP2-210ENST00000543663 LAS1LQ9Y4W2 734 aaKnown RBP17.31■□□□□ 0.36
TUBGCP2-210ENST00000543663 FYCO1Q9BQS8 1478 aa17.31■□□□□ 0.36
TUBGCP2-210ENST00000543663 RBM19Q9Y4C8 960 aaKnown RBP17.31■□□□□ 0.36
TUBGCP2-210ENST00000543663 TIAM1Q13009 1591 aa17.29■□□□□ 0.36
TUBGCP2-210ENST00000543663 ZNF644Q9H582 1327 aaPredicted RBP17.28■□□□□ 0.36
TUBGCP2-210ENST00000543663 HSP90AA1P07900 732 aaKnown RBP17.27■□□□□ 0.36
TUBGCP2-210ENST00000543663 TSHZ2Q9NRE2 1034 aa17.26■□□□□ 0.35
TUBGCP2-210ENST00000543663 PLPPR3Q6T4P5 718 aa17.26■□□□□ 0.35
TUBGCP2-210ENST00000543663 AQRO60306 1485 aaKnown RBP eCLIP17.25■□□□□ 0.353e-7■■■■■ 31.5
TUBGCP2-210ENST00000543663 PPP1R15AO75807 674 aaPredicted RBP17.25■□□□□ 0.35
TUBGCP2-210ENST00000543663 HSPA5P11021 654 aaKnown RBP17.23■□□□□ 0.35
TUBGCP2-210ENST00000543663 WDR43Q15061 677 aaKnown RBP eCLIP17.23■□□□□ 0.35
TUBGCP2-210ENST00000543663 MRC2Q9UBG0 1479 aa17.22■□□□□ 0.35
TUBGCP2-210ENST00000543663 MPHOSPH9Q99550 1183 aa17.22■□□□□ 0.35
TUBGCP2-210ENST00000543663 URB2Q14146 1524 aaKnown RBP17.22■□□□□ 0.35
TUBGCP2-210ENST00000543663 L3MBTL2Q969R5 705 aa17.2■□□□□ 0.34
TUBGCP2-210ENST00000543663 NEFMP07197 916 aa17.2■□□□□ 0.34
TUBGCP2-210ENST00000543663 NEUROD2Q15784 382 aa17.2■□□□□ 0.34
TUBGCP2-210ENST00000543663 GRIN2BQ13224 1484 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms