RNA–Protein interactions for RNA: ENST00000543322.5

PTCD2-212, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 2,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-212ENST00000543322 SETD5Q9C0A6 1442 aa18.76■□□□□ 0.59
PTCD2-212ENST00000543322 PHLDB1Q86UU1 1377 aa18.75■□□□□ 0.59
PTCD2-212ENST00000543322 EFCAB5A4FU69 1503 aa18.74■□□□□ 0.59
PTCD2-212ENST00000543322 DNMBPQ6XZF7 1577 aa18.73■□□□□ 0.59
PTCD2-212ENST00000543322 CC2D2AQ9P2K1 1620 aa18.72■□□□□ 0.59
PTCD2-212ENST00000543322 FYCO1Q9BQS8 1478 aa18.71■□□□□ 0.59
PTCD2-212ENST00000543322 FANCD2Q9BXW9 1451 aa18.71■□□□□ 0.59
PTCD2-212ENST00000543322 ITGAEP38570 1179 aa18.71■□□□□ 0.59
PTCD2-212ENST00000543322 ABCA10Q8WWZ4 1543 aa18.7■□□□□ 0.58
PTCD2-212ENST00000543322 CUL7Q14999 1698 aa18.7■□□□□ 0.58
PTCD2-212ENST00000543322 MYT1Q01538 1121 aa18.69■□□□□ 0.58
PTCD2-212ENST00000543322 CTTNBP2Q8WZ74 1663 aa18.69■□□□□ 0.58
PTCD2-212ENST00000543322 AQRO60306 1485 aaKnown RBP eCLIP18.69■□□□□ 0.58
PTCD2-212ENST00000543322 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.65■□□□□ 0.58
PTCD2-212ENST00000543322 CASKIN1Q8WXD9 1431 aa18.65■□□□□ 0.58
PTCD2-212ENST00000543322 TOPBP1Q92547 1522 aa18.64■□□□□ 0.57
PTCD2-212ENST00000543322 WDR97A6NE52 1622 aa18.64■□□□□ 0.57
PTCD2-212ENST00000543322 POLA1P09884 1462 aaPredicted RBP18.64■□□□□ 0.57
PTCD2-212ENST00000543322 FHOD3Q2V2M9 1422 aa18.63■□□□□ 0.57
PTCD2-212ENST00000543322 RAD54L2Q9Y4B4 1467 aa18.61■□□□□ 0.57
PTCD2-212ENST00000543322 SUPT16HQ9Y5B9 1047 aaKnown RBP18.61■□□□□ 0.57
PTCD2-212ENST00000543322 FAM50AQ14320 339 aaKnown RBP18.57■□□□□ 0.56
PTCD2-212ENST00000543322 TIMELESSQ9UNS1 1208 aa18.57■□□□□ 0.56
PTCD2-212ENST00000543322 SNAPC4Q5SXM2 1469 aa18.56■□□□□ 0.56
PTCD2-212ENST00000543322 SAMD9Q5K651 1589 aa18.54■□□□□ 0.56
PTCD2-212ENST00000543322 FMN1Q68DA7 1419 aa18.53■□□□□ 0.56
PTCD2-212ENST00000543322 P3H3Q8IVL6 736 aa18.52■□□□□ 0.56
PTCD2-212ENST00000543322 FGD6Q6ZV73 1430 aa18.52■□□□□ 0.56
PTCD2-212ENST00000543322 SIN3AQ96ST3 1273 aa18.52■□□□□ 0.55
PTCD2-212ENST00000543322 ABCA5Q8WWZ7 1642 aa18.51■□□□□ 0.55
PTCD2-212ENST00000543322 LRRIQ1Q96JM4 1722 aa18.51■□□□□ 0.55
PTCD2-212ENST00000543322 THOC2Q8NI27 1593 aaKnown RBP18.5■□□□□ 0.55
PTCD2-212ENST00000543322 NESP48681 1621 aa18.48■□□□□ 0.55
PTCD2-212ENST00000543322 PTPN23Q9H3S7 1636 aa18.47■□□□□ 0.55
PTCD2-212ENST00000543322 LAMC3Q9Y6N6 1575 aa18.47■□□□□ 0.55
PTCD2-212ENST00000543322 KIF21AQ7Z4S6 1674 aa18.47■□□□□ 0.55
PTCD2-212ENST00000543322 URB2Q14146 1524 aaKnown RBP18.46■□□□□ 0.55
PTCD2-212ENST00000543322 CCDC18Q5T9S5 1454 aa18.46■□□□□ 0.55
PTCD2-212ENST00000543322 KCNH8Q96L42 1107 aa18.46■□□□□ 0.55
PTCD2-212ENST00000543322 PPP1R15AO75807 674 aaPredicted RBP18.45■□□□□ 0.54
PTCD2-212ENST00000543322 HFM1A2PYH4 1435 aa18.45■□□□□ 0.54
PTCD2-212ENST00000543322 GRIN2BQ13224 1484 aa18.44■□□□□ 0.54
PTCD2-212ENST00000543322 ATP1B4Q9UN42 357 aaPredicted RBP18.44■□□□□ 0.54
PTCD2-212ENST00000543322 SUPT6HQ7KZ85 1726 aaKnown RBP18.42■□□□□ 0.54
PTCD2-212ENST00000543322 EHBP1L1Q8N3D4 1523 aa18.42■□□□□ 0.54
PTCD2-212ENST00000543322 UACAQ9BZF9 1416 aa18.42■□□□□ 0.54
PTCD2-212ENST00000543322 DDX10Q13206 875 aaKnown RBP18.41■□□□□ 0.54
PTCD2-212ENST00000543322 PTPRKQ15262 1439 aa18.4■□□□□ 0.54
PTCD2-212ENST00000543322 MTUS2Q5JR59 1369 aa18.4■□□□□ 0.54
PTCD2-212ENST00000543322 NCOA2Q15596 1464 aa18.4■□□□□ 0.54
PTCD2-212ENST00000543322 MYOM3Q5VTT5 1437 aa18.39■□□□□ 0.54
PTCD2-212ENST00000543322 ARHGEF11O15085 1522 aa18.38■□□□□ 0.53
PTCD2-212ENST00000543322 GAPVD1Q14C86 1478 aa18.37■□□□□ 0.53
PTCD2-212ENST00000543322 NAIPQ13075 1403 aa18.37■□□□□ 0.53
PTCD2-212ENST00000543322 UGGT2Q9NYU1 1516 aa18.36■□□□□ 0.53
PTCD2-212ENST00000543322 CCER2I3L3R5 266 aa18.36■□□□□ 0.53
PTCD2-212ENST00000543322 KDM5BQ9UGL1 1544 aa18.35■□□□□ 0.53
PTCD2-212ENST00000543322 TONSLQ96HA7 1378 aa18.34■□□□□ 0.53
PTCD2-212ENST00000543322 GCC2Q8IWJ2 1684 aa18.34■□□□□ 0.53
PTCD2-212ENST00000543322 TSHZ2Q9NRE2 1034 aa18.33■□□□□ 0.52
PTCD2-212ENST00000543322 TCOF1Q13428 1488 aaKnown RBP18.31■□□□□ 0.52
PTCD2-212ENST00000543322 HECW1Q76N89 1606 aa18.31■□□□□ 0.52
PTCD2-212ENST00000543322 MAGI3Q5TCQ9 1506 aa18.3■□□□□ 0.52
PTCD2-212ENST00000543322 TDRD9Q8NDG6 1382 aaKnown RBP18.3■□□□□ 0.52
PTCD2-212ENST00000543322 TARBP1Q13395 1621 aaKnown RBP18.29■□□□□ 0.52
PTCD2-212ENST00000543322 ANP32CO43423 234 aa18.27■□□□□ 0.52
PTCD2-212ENST00000543322 AKNAQ7Z591 1439 aa18.27■□□□□ 0.52
PTCD2-212ENST00000543322 PBRM1Q86U86 1689 aa18.26■□□□□ 0.51
PTCD2-212ENST00000543322 PDS5BQ9NTI5 1447 aa18.26■□□□□ 0.51
PTCD2-212ENST00000543322 HIRIP3Q9BW71 556 aaPredicted RBP18.25■□□□□ 0.51
PTCD2-212ENST00000543322 DENND4BO75064 1496 aaPredicted RBP18.22■□□□□ 0.51
PTCD2-212ENST00000543322 IQGAP2Q13576 1575 aa18.21■□□□□ 0.51
PTCD2-212ENST00000543322 FKBP8Q14318 412 aa18.21■□□□□ 0.51
PTCD2-212ENST00000543322 ADAMTS12P58397 1594 aa18.2■□□□□ 0.5
PTCD2-212ENST00000543322 WDR62O43379 1518 aa18.18■□□□□ 0.5
PTCD2-212ENST00000543322 EPRSP07814 1512 aaKnown RBP18.18■□□□□ 0.5
PTCD2-212ENST00000543322 KDM6BO15054 1643 aa18.18■□□□□ 0.5
PTCD2-212ENST00000543322 MIA2Q96PC5 1412 aa18.17■□□□□ 0.5
PTCD2-212ENST00000543322 BCANQ96GW7 911 aa18.15■□□□□ 0.5
PTCD2-212ENST00000543322 NEFLP07196 543 aa18.15■□□□□ 0.5
PTCD2-212ENST00000543322 TRIM52Q96A61 297 aa18.13■□□□□ 0.49
PTCD2-212ENST00000543322 CDK13Q14004 1512 aaKnown RBP18.12■□□□□ 0.49
PTCD2-212ENST00000543322 RRP7BPQ9NSQ0 103 aa18.09■□□□□ 0.49
PTCD2-212ENST00000543322 WASHC2AQ641Q2 1341 aa18.07■□□□□ 0.48
PTCD2-212ENST00000543322 DNMT1P26358 1616 aaKnown RBP18.07■□□□□ 0.48
PTCD2-212ENST00000543322 HSPA5P11021 654 aaKnown RBP18.06■□□□□ 0.48
PTCD2-212ENST00000543322 ROCK1Q13464 1354 aa18.05■□□□□ 0.48
PTCD2-212ENST00000543322 CNTLNQ9NXG0 1405 aa18.05■□□□□ 0.48
PTCD2-212ENST00000543322 CHIC2Q9UKJ5 165 aa18.05■□□□□ 0.48
PTCD2-212ENST00000543322 POLR1AO95602 1720 aaPredicted RBP18.04■□□□□ 0.48
PTCD2-212ENST00000543322 ANP32EQ9BTT0 268 aa18.03■□□□□ 0.48
PTCD2-212ENST00000543322 KIAA0556O60303 1618 aa18.03■□□□□ 0.48
PTCD2-212ENST00000543322 DAPK1P53355 1430 aa18.03■□□□□ 0.48
PTCD2-212ENST00000543322 MRC2Q9UBG0 1479 aa18.02■□□□□ 0.48
PTCD2-212ENST00000543322 MPHOSPH9Q99550 1183 aa18.02■□□□□ 0.48
PTCD2-212ENST00000543322 NCOA1Q15788 1441 aa18.02■□□□□ 0.47
PTCD2-212ENST00000543322 TEX14Q8IWB6 1497 aa18.01■□□□□ 0.47
PTCD2-212ENST00000543322 RPRD2Q5VT52 1461 aaKnown RBP18.01■□□□□ 0.47
PTCD2-212ENST00000543322 EIF4G2P78344 907 aaKnown RBP eCLIP18■□□□□ 0.47
PTCD2-212ENST00000543322 DISP1Q96F81 1524 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms