RNA–Protein interactions for RNA: ENST00000542984.1

CACNA1C-IT1-201, CACNA1C intronic transcript 1, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT1, Length 687 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT1-201ENST00000542984 GAPVD1Q14C86 1478 aa10.73□□□□□ -0.69
CACNA1C-IT1-201ENST00000542984 CHMP7Q8WUX9 453 aaPredicted RBP10.71□□□□□ -0.69
CACNA1C-IT1-201ENST00000542984 MAGI1Q96QZ7 1491 aaPredicted RBP10.71□□□□□ -0.69
CACNA1C-IT1-201ENST00000542984 POLA1P09884 1462 aaPredicted RBP10.7□□□□□ -0.7
CACNA1C-IT1-201ENST00000542984 SNAPC4Q5SXM2 1469 aa10.69□□□□□ -0.7
CACNA1C-IT1-201ENST00000542984 CCDC88BA6NC98 1476 aa10.68□□□□□ -0.7
CACNA1C-IT1-201ENST00000542984 KIF13AQ9H1H9 1805 aa10.68□□□□□ -0.7
CACNA1C-IT1-201ENST00000542984 CAPN15O75808 1086 aa10.67□□□□□ -0.7
CACNA1C-IT1-201ENST00000542984 TDRD9Q8NDG6 1382 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-IT1-201ENST00000542984 DSG3P32926 999 aa10.66□□□□□ -0.7
CACNA1C-IT1-201ENST00000542984 SYNJ2O15056 1496 aa10.66□□□□□ -0.7
CACNA1C-IT1-201ENST00000542984 SOGA1O94964 1423 aa10.66□□□□□ -0.7
CACNA1C-IT1-201ENST00000542984 GRIN2BQ13224 1484 aa10.63□□□□□ -0.71
CACNA1C-IT1-201ENST00000542984 RAD54L2Q9Y4B4 1467 aa10.63□□□□□ -0.71
CACNA1C-IT1-201ENST00000542984 CSRNP3Q8WYN3 585 aa10.63□□□□□ -0.71
CACNA1C-IT1-201ENST00000542984 KDM4FA0A1W2PPD8 638 aa10.62□□□□□ -0.71
CACNA1C-IT1-201ENST00000542984 PBRM1Q86U86 1689 aa10.56□□□□□ -0.72
CACNA1C-IT1-201ENST00000542984 FGD5Q6ZNL6 1462 aa10.55□□□□□ -0.72
CACNA1C-IT1-201ENST00000542984 ERCC6L2Q5T890 1561 aa10.55□□□□□ -0.72
CACNA1C-IT1-201ENST00000542984 ABCC10Q5T3U5 1492 aa10.53□□□□□ -0.72
CACNA1C-IT1-201ENST00000542984 CEP170Q5SW79 1584 aa10.52□□□□□ -0.72
CACNA1C-IT1-201ENST00000542984 KDM6BO15054 1643 aa10.51□□□□□ -0.73
CACNA1C-IT1-201ENST00000542984 SHROOM2Q13796 1616 aa10.51□□□□□ -0.73
CACNA1C-IT1-201ENST00000542984 APLP2Q06481 763 aa10.51□□□□□ -0.73
CACNA1C-IT1-201ENST00000542984 FAM69CQ0P6D2 419 aa10.51□□□□□ -0.73
CACNA1C-IT1-201ENST00000542984 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.5□□□□□ -0.73
CACNA1C-IT1-201ENST00000542984 HNRNPUL2Q1KMD3 747 aaKnown RBP10.5□□□□□ -0.73
CACNA1C-IT1-201ENST00000542984 ABCB7O75027 752 aa10.49□□□□□ -0.73
CACNA1C-IT1-201ENST00000542984 NUP160Q12769 1436 aa10.49□□□□□ -0.73
CACNA1C-IT1-201ENST00000542984 GRIN2AQ12879 1464 aa10.49□□□□□ -0.73
CACNA1C-IT1-201ENST00000542984 MAPKBP1O60336 1514 aa10.48□□□□□ -0.73
CACNA1C-IT1-201ENST00000542984 SAMD1Q6SPF0 538 aaPredicted RBP10.48□□□□□ -0.73
CACNA1C-IT1-201ENST00000542984 ZNF219Q9P2Y4 722 aaPredicted RBP10.48□□□□□ -0.73
CACNA1C-IT1-201ENST00000542984 CUX1P39880 1505 aa10.48□□□□□ -0.73
CACNA1C-IT1-201ENST00000542984 DIP2BQ9P265 1576 aa10.47□□□□□ -0.73
CACNA1C-IT1-201ENST00000542984 ABCA5Q8WWZ7 1642 aa10.47□□□□□ -0.73
CACNA1C-IT1-201ENST00000542984 NPM1P06748 294 aaKnown RBP eCLIP10.46□□□□□ -0.73
CACNA1C-IT1-201ENST00000542984 MYCNP04198 464 aaPredicted RBP10.45□□□□□ -0.74
CACNA1C-IT1-201ENST00000542984 ABCA10Q8WWZ4 1543 aa10.44□□□□□ -0.74
CACNA1C-IT1-201ENST00000542984 FBXO41Q8TF61 875 aa10.44□□□□□ -0.74
CACNA1C-IT1-201ENST00000542984 HECW2Q9P2P5 1572 aa10.43□□□□□ -0.74
CACNA1C-IT1-201ENST00000542984 TSPOAP1O95153 1857 aa10.43□□□□□ -0.74
CACNA1C-IT1-201ENST00000542984 ADGRL1O94910 1474 aa10.41□□□□□ -0.74
CACNA1C-IT1-201ENST00000542984 ADAMTS12P58397 1594 aa10.4□□□□□ -0.74
CACNA1C-IT1-201ENST00000542984 PRG4Q92954 1404 aaPredicted RBP10.4□□□□□ -0.75
CACNA1C-IT1-201ENST00000542984 POTEHQ6S545 545 aa10.38□□□□□ -0.75
CACNA1C-IT1-201ENST00000542984 FHAD1B1AJZ9 1412 aa10.38□□□□□ -0.75
CACNA1C-IT1-201ENST00000542984 ZBTB22O15209 634 aa10.37□□□□□ -0.75
CACNA1C-IT1-201ENST00000542984 JPH4Q96JJ6 628 aa10.37□□□□□ -0.75
CACNA1C-IT1-201ENST00000542984 FOXD4L1Q9NU39 408 aa10.37□□□□□ -0.75
CACNA1C-IT1-201ENST00000542984 ADCY10Q96PN6 1610 aa10.36□□□□□ -0.75
CACNA1C-IT1-201ENST00000542984 ERICH3Q5RHP9 1530 aa10.32□□□□□ -0.76
CACNA1C-IT1-201ENST00000542984 ATF5Q9Y2D1 282 aaPredicted RBP10.3□□□□□ -0.76
CACNA1C-IT1-201ENST00000542984 WRNQ14191 1432 aaPredicted RBP eCLIP10.3□□□□□ -0.76
CACNA1C-IT1-201ENST00000542984 GLI2P10070 1586 aa10.3□□□□□ -0.76
CACNA1C-IT1-201ENST00000542984 PPRC1Q5VV67 1664 aaKnown RBP10.29□□□□□ -0.76
CACNA1C-IT1-201ENST00000542984 LMTK3Q96Q04 1460 aa10.29□□□□□ -0.76
CACNA1C-IT1-201ENST00000542984 TOP2BQ02880 1626 aa10.28□□□□□ -0.76
CACNA1C-IT1-201ENST00000542984 RUSC2Q8N2Y8 1516 aa10.27□□□□□ -0.77
CACNA1C-IT1-201ENST00000542984 PLB1Q6P1J6 1458 aa10.25□□□□□ -0.77
CACNA1C-IT1-201ENST00000542984 POLA2Q14181 598 aa10.24□□□□□ -0.77
CACNA1C-IT1-201ENST00000542984 SOCS7O14512 581 aa10.23□□□□□ -0.77
CACNA1C-IT1-201ENST00000542984 COL17A1Q9UMD9 1497 aaPredicted RBP10.23□□□□□ -0.77
CACNA1C-IT1-201ENST00000542984 TEX14Q8IWB6 1497 aa10.22□□□□□ -0.77
CACNA1C-IT1-201ENST00000542984 BIVM-ERCC5R4GMW8 1640 aa10.21□□□□□ -0.78
CACNA1C-IT1-201ENST00000542984 ASXL2Q76L83 1435 aa10.2□□□□□ -0.78
CACNA1C-IT1-201ENST00000542984 ABCC2Q92887 1545 aa10.2□□□□□ -0.78
CACNA1C-IT1-201ENST00000542984 KIAA0586Q9BVV6 1533 aa10.2□□□□□ -0.78
CACNA1C-IT1-201ENST00000542984 MAP3K4Q9Y6R4 1608 aa10.2□□□□□ -0.78
CACNA1C-IT1-201ENST00000542984 PTPRGP23470 1445 aa10.18□□□□□ -0.78
CACNA1C-IT1-201ENST00000542984 UHRF1BP1LA0JNW5 1464 aa10.16□□□□□ -0.78
CACNA1C-IT1-201ENST00000542984 CUL7Q14999 1698 aa10.15□□□□□ -0.78
CACNA1C-IT1-201ENST00000542984 EPRSP07814 1512 aaKnown RBP10.15□□□□□ -0.78
CACNA1C-IT1-201ENST00000542984 TNIKQ9UKE5 1360 aa10.13□□□□□ -0.79
CACNA1C-IT1-201ENST00000542984 ILDR2Q71H61 639 aa10.12□□□□□ -0.79
CACNA1C-IT1-201ENST00000542984 CARMIL2Q6F5E8 1435 aa10.12□□□□□ -0.79
CACNA1C-IT1-201ENST00000542984 KDM5BQ9UGL1 1544 aa10.1□□□□□ -0.79
CACNA1C-IT1-201ENST00000542984 DISP3Q9P2K9 1392 aa10.1□□□□□ -0.79
CACNA1C-IT1-201ENST00000542984 UACAQ9BZF9 1416 aa10.09□□□□□ -0.79
CACNA1C-IT1-201ENST00000542984 PTPRMP28827 1452 aa10.09□□□□□ -0.79
CACNA1C-IT1-201ENST00000542984 KIF21BO75037 1637 aa10.08□□□□□ -0.8
CACNA1C-IT1-201ENST00000542984 RBM42Q9BTD8 480 aaKnown RBP10.08□□□□□ -0.8
CACNA1C-IT1-201ENST00000542984 PCF11O94913 1555 aaKnown RBP10.08□□□□□ -0.8
CACNA1C-IT1-201ENST00000542984 ADAMTSL3P82987 1691 aa10.08□□□□□ -0.8
CACNA1C-IT1-201ENST00000542984 MAGI3Q5TCQ9 1506 aa10.07□□□□□ -0.8
CACNA1C-IT1-201ENST00000542984 CFAP43Q8NDM7 1665 aa10.06□□□□□ -0.8
CACNA1C-IT1-201ENST00000542984 CERKQ8TCT0 537 aa10.06□□□□□ -0.8
CACNA1C-IT1-201ENST00000542984 ZCCHC11Q5TAX3 1644 aaKnown RBP10.05□□□□□ -0.8
CACNA1C-IT1-201ENST00000542984 IGF1RP08069 1367 aa10.03□□□□□ -0.8
CACNA1C-IT1-201ENST00000542984 CD109Q6YHK3 1445 aa10.03□□□□□ -0.8
CACNA1C-IT1-201ENST00000542984 WDR7Q9Y4E6 1490 aa10.03□□□□□ -0.8
CACNA1C-IT1-201ENST00000542984 TTBK1Q5TCY1 1321 aaPredicted RBP10.03□□□□□ -0.8
CACNA1C-IT1-201ENST00000542984 SUPT5HO00267 1087 aaKnown RBP10.02□□□□□ -0.81
CACNA1C-IT1-201ENST00000542984 ARAP3Q8WWN8 1544 aa10.02□□□□□ -0.81
CACNA1C-IT1-201ENST00000542984 ATXN8OSP0DMR3 200 aa10.01□□□□□ -0.81
CACNA1C-IT1-201ENST00000542984 IQGAP2Q13576 1575 aa10.01□□□□□ -0.81
CACNA1C-IT1-201ENST00000542984 PHLDB1Q86UU1 1377 aa10□□□□□ -0.81
CACNA1C-IT1-201ENST00000542984 BCORL1Q5H9F3 1711 aa9.99□□□□□ -0.81
CACNA1C-IT1-201ENST00000542984 SPATA31D1Q6ZQQ2 1576 aa9.99□□□□□ -0.81
CACNA1C-IT1-201ENST00000542984 DISP1Q96F81 1524 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms