RNA–Protein interactions for RNA: ENST00000542984.1

CACNA1C-IT1-201, CACNA1C intronic transcript 1, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT1, Length 687 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT1-201ENST00000542984 AEBP2Q6ZN18 517 aaPredicted RBP18.01■□□□□ 0.47
CACNA1C-IT1-201ENST00000542984 CHIC1Q5VXU3 224 aa17.05■□□□□ 0.32
CACNA1C-IT1-201ENST00000542984 SENP3Q9H4L4 574 aaPredicted RBP15.24■□□□□ 0.03
CACNA1C-IT1-201ENST00000542984 PHF23Q9BUL5 403 aaPredicted RBP15.06■□□□□ 0
CACNA1C-IT1-201ENST00000542984 NISCHQ9Y2I1 1504 aa14.46□□□□□ -0.09
CACNA1C-IT1-201ENST00000542984 FOXD1Q16676 465 aa14.26□□□□□ -0.13
CACNA1C-IT1-201ENST00000542984 ABCC9O60706 1549 aa13.64□□□□□ -0.23
CACNA1C-IT1-201ENST00000542984 PLPPR3Q6T4P5 718 aa13.58□□□□□ -0.24
CACNA1C-IT1-201ENST00000542984 POTEDQ86YR6 584 aa13.56□□□□□ -0.24
CACNA1C-IT1-201ENST00000542984 PPP6R1Q9UPN7 881 aa13.39□□□□□ -0.27
CACNA1C-IT1-201ENST00000542984 ADRA2BP18089 450 aa13.32□□□□□ -0.28
CACNA1C-IT1-201ENST00000542984 PIAS4Q8N2W9 510 aaPredicted RBP13.3□□□□□ -0.28
CACNA1C-IT1-201ENST00000542984 MSH5O43196 834 aa13.26□□□□□ -0.29
CACNA1C-IT1-201ENST00000542984 CCDC180Q9P1Z9 1646 aa13.26□□□□□ -0.29
CACNA1C-IT1-201ENST00000542984 DNAJC5BQ9UF47 199 aa13.25□□□□□ -0.29
CACNA1C-IT1-201ENST00000542984 RB1CC1Q8TDY2 1594 aa12.85□□□□□ -0.35
CACNA1C-IT1-201ENST00000542984 NACADO15069 1562 aa12.65□□□□□ -0.38
CACNA1C-IT1-201ENST00000542984 DNAJC5Q9H3Z4 198 aa12.62□□□□□ -0.39
CACNA1C-IT1-201ENST00000542984 PABPN1Q86U42 306 aaKnown RBP eCLIP12.59□□□□□ -0.39
CACNA1C-IT1-201ENST00000542984 UNC13AQ9UPW8 1703 aa12.55□□□□□ -0.4
CACNA1C-IT1-201ENST00000542984 BICRAQ9NZM4 1560 aa12.46□□□□□ -0.42
CACNA1C-IT1-201ENST00000542984 CECR2Q9BXF3 1484 aa12.38□□□□□ -0.43
CACNA1C-IT1-201ENST00000542984 MYO15BQ96JP2 1530 aa12.35□□□□□ -0.43
CACNA1C-IT1-201ENST00000542984 CC2D2AQ9P2K1 1620 aa12.34□□□□□ -0.43
CACNA1C-IT1-201ENST00000542984 DCAF8L2P0C7V8 631 aa12.34□□□□□ -0.43
CACNA1C-IT1-201ENST00000542984 SHROOM4Q9ULL8 1493 aa12.33□□□□□ -0.44
CACNA1C-IT1-201ENST00000542984 MAPK8IP2Q13387 824 aaPredicted RBP12.24□□□□□ -0.45
CACNA1C-IT1-201ENST00000542984 EIF4G1Q04637 1599 aaKnown RBP12.19□□□□□ -0.46
CACNA1C-IT1-201ENST00000542984 DMRT2Q9Y5R5 561 aa12.12□□□□□ -0.47
CACNA1C-IT1-201ENST00000542984 CUX2O14529 1486 aa12.05□□□□□ -0.48
CACNA1C-IT1-201ENST00000542984 SCAF1Q9H7N4 1312 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-IT1-201ENST00000542984 DCAF1Q9Y4B6 1507 aa11.99□□□□□ -0.49
CACNA1C-IT1-201ENST00000542984 PPP4R3CPQ6ZMV5 832 aa11.93□□□□□ -0.5
CACNA1C-IT1-201ENST00000542984 SCRIBQ14160 1630 aa11.93□□□□□ -0.5
CACNA1C-IT1-201ENST00000542984 ZCCHC6Q5VYS8 1495 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-IT1-201ENST00000542984 ERCC6Q03468 1493 aa11.83□□□□□ -0.52
CACNA1C-IT1-201ENST00000542984 TRIM41Q8WV44 630 aa11.75□□□□□ -0.53
CACNA1C-IT1-201ENST00000542984 HOXD11P31277 338 aaPredicted RBP11.68□□□□□ -0.54
CACNA1C-IT1-201ENST00000542984 NCAPD3P42695 1498 aa11.68□□□□□ -0.54
CACNA1C-IT1-201ENST00000542984 CNKSR2Q8WXI2 1034 aa11.67□□□□□ -0.54
CACNA1C-IT1-201ENST00000542984 THOC2Q8NI27 1593 aaKnown RBP11.59□□□□□ -0.55
CACNA1C-IT1-201ENST00000542984 RNF216Q9NWF9 866 aaPredicted RBP11.58□□□□□ -0.56
CACNA1C-IT1-201ENST00000542984 DCAF8L1A6NGE4 600 aa11.56□□□□□ -0.56
CACNA1C-IT1-201ENST00000542984 NESP48681 1621 aa11.56□□□□□ -0.56
CACNA1C-IT1-201ENST00000542984 HMGXB3Q12766 1538 aa11.53□□□□□ -0.56
CACNA1C-IT1-201ENST00000542984 ATAD2BQ9ULI0 1458 aa11.52□□□□□ -0.56
CACNA1C-IT1-201ENST00000542984 SMARCA2P51531 1590 aa11.5□□□□□ -0.57
CACNA1C-IT1-201ENST00000542984 LAMC3Q9Y6N6 1575 aa11.5□□□□□ -0.57
CACNA1C-IT1-201ENST00000542984 KIF21AQ7Z4S6 1674 aa11.44□□□□□ -0.58
CACNA1C-IT1-201ENST00000542984 PDS5BQ9NTI5 1447 aa11.43□□□□□ -0.58
CACNA1C-IT1-201ENST00000542984 NCBP3Q53F19 620 aaKnown RBP11.41□□□□□ -0.58
CACNA1C-IT1-201ENST00000542984 BAZ1AQ9NRL2 1556 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-IT1-201ENST00000542984 OSCARQ8IYS5 282 aa11.4□□□□□ -0.58
CACNA1C-IT1-201ENST00000542984 SMARCA4P51532 1647 aa11.38□□□□□ -0.59
CACNA1C-IT1-201ENST00000542984 RNF39Q9H2S5 420 aa11.38□□□□□ -0.59
CACNA1C-IT1-201ENST00000542984 BAZ1BQ9UIG0 1483 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-IT1-201ENST00000542984 NPM3O75607 178 aaKnown RBP11.35□□□□□ -0.59
CACNA1C-IT1-201ENST00000542984 CACNB1Q02641 598 aaPredicted RBP11.35□□□□□ -0.59
CACNA1C-IT1-201ENST00000542984 MRC2Q9UBG0 1479 aa11.34□□□□□ -0.59
CACNA1C-IT1-201ENST00000542984 WDR62O43379 1518 aa11.34□□□□□ -0.59
CACNA1C-IT1-201ENST00000542984 PEG3Q9GZU2 1588 aa11.33□□□□□ -0.6
CACNA1C-IT1-201ENST00000542984 RIMBP3CA6NJZ7 1639 aa11.28□□□□□ -0.6
CACNA1C-IT1-201ENST00000542984 RIMBP3BA6NNM3 1639 aa11.28□□□□□ -0.6
CACNA1C-IT1-201ENST00000542984 RIMBP3Q9UFD9 1639 aa11.28□□□□□ -0.6
CACNA1C-IT1-201ENST00000542984 KCNA4P22459 653 aa11.28□□□□□ -0.6
CACNA1C-IT1-201ENST00000542984 CADPSQ9ULU8 1353 aa11.27□□□□□ -0.61
CACNA1C-IT1-201ENST00000542984 ARHGEF11O15085 1522 aa11.19□□□□□ -0.62
CACNA1C-IT1-201ENST00000542984 CEP164Q9UPV0 1460 aa11.19□□□□□ -0.62
CACNA1C-IT1-201ENST00000542984 TRHP20396 242 aaPredicted RBP11.15□□□□□ -0.62
CACNA1C-IT1-201ENST00000542984 C1QBPQ07021 282 aaKnown RBP11.15□□□□□ -0.62
CACNA1C-IT1-201ENST00000542984 MROH2BQ7Z745 1585 aa11.15□□□□□ -0.62
CACNA1C-IT1-201ENST00000542984 CYB5RLQ6IPT4 315 aa11.12□□□□□ -0.63
CACNA1C-IT1-201ENST00000542984 FANCD2Q9BXW9 1451 aa11.12□□□□□ -0.63
CACNA1C-IT1-201ENST00000542984 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.08□□□□□ -0.64
CACNA1C-IT1-201ENST00000542984 URB2Q14146 1524 aaKnown RBP11.04□□□□□ -0.64
CACNA1C-IT1-201ENST00000542984 EHMT2Q96KQ7 1210 aa11.04□□□□□ -0.64
CACNA1C-IT1-201ENST00000542984 CFTRP13569 1480 aa11.04□□□□□ -0.64
CACNA1C-IT1-201ENST00000542984 ARAP1Q96P48 1450 aa11.02□□□□□ -0.65
CACNA1C-IT1-201ENST00000542984 RSF1Q96T23 1441 aaPredicted RBP11.01□□□□□ -0.65
CACNA1C-IT1-201ENST00000542984 IFT140Q96RY7 1462 aa11□□□□□ -0.65
CACNA1C-IT1-201ENST00000542984 WIZO95785 1651 aa10.98□□□□□ -0.65
CACNA1C-IT1-201ENST00000542984 ZNF608Q9ULD9 1512 aaPredicted RBP10.97□□□□□ -0.65
CACNA1C-IT1-201ENST00000542984 CHD1O14646 1710 aa10.95□□□□□ -0.66
CACNA1C-IT1-201ENST00000542984 PRDM2Q13029 1718 aa10.94□□□□□ -0.66
CACNA1C-IT1-201ENST00000542984 U3KPZ7 1027 aaPredicted RBP10.93□□□□□ -0.66
CACNA1C-IT1-201ENST00000542984 EIF4G3O43432 1585 aaKnown RBP10.91□□□□□ -0.66
CACNA1C-IT1-201ENST00000542984 ABCC8Q09428 1581 aa10.88□□□□□ -0.67
CACNA1C-IT1-201ENST00000542984 SLC4A2P04920 1241 aa10.87□□□□□ -0.67
CACNA1C-IT1-201ENST00000542984 TOPBP1Q92547 1522 aa10.85□□□□□ -0.67
CACNA1C-IT1-201ENST00000542984 FBLN2P98095 1184 aa10.83□□□□□ -0.68
CACNA1C-IT1-201ENST00000542984 SLC4A1APQ9BWU0 796 aaKnown RBP10.82□□□□□ -0.68
CACNA1C-IT1-201ENST00000542984 TARBP1Q13395 1621 aaKnown RBP10.82□□□□□ -0.68
CACNA1C-IT1-201ENST00000542984 AQRO60306 1485 aaKnown RBP eCLIP10.81□□□□□ -0.68
CACNA1C-IT1-201ENST00000542984 CLASP1Q7Z460 1538 aa10.81□□□□□ -0.68
CACNA1C-IT1-201ENST00000542984 ILDR1Q86SU0 546 aaPredicted RBP10.81□□□□□ -0.68
CACNA1C-IT1-201ENST00000542984 TOP2AP11388 1531 aaKnown RBP10.79□□□□□ -0.68
CACNA1C-IT1-201ENST00000542984 SYNJ1O43426 1573 aa10.78□□□□□ -0.68
CACNA1C-IT1-201ENST00000542984 DNMBPQ6XZF7 1577 aa10.78□□□□□ -0.68
CACNA1C-IT1-201ENST00000542984 SPINK5Q9NQ38 1064 aaPredicted RBP10.78□□□□□ -0.68
CACNA1C-IT1-201ENST00000542984 WDR97A6NE52 1622 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms