RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 PLCB2Q00722 1185 aa18.39■□□□□ 0.53
TRPM1-203ENST00000542188 MSNP26038 577 aaKnown RBP18.38■□□□□ 0.53
TRPM1-203ENST00000542188 AMER1Q5JTC6 1135 aaPredicted RBP18.36■□□□□ 0.53
TRPM1-203ENST00000542188 NOP58Q9Y2X3 529 aaKnown RBP18.36■□□□□ 0.53
TRPM1-203ENST00000542188 TPRNQ4KMQ1 711 aa18.33■□□□□ 0.52
TRPM1-203ENST00000542188 P3H3Q8IVL6 736 aa18.32■□□□□ 0.52
TRPM1-203ENST00000542188 TULP1O00294 542 aaPredicted RBP18.32■□□□□ 0.52
TRPM1-203ENST00000542188 ARID3CA6NKF2 412 aa18.31■□□□□ 0.52
TRPM1-203ENST00000542188 LAS1LQ9Y4W2 734 aaKnown RBP18.31■□□□□ 0.52
TRPM1-203ENST00000542188 HSP90AB1P08238 724 aaKnown RBP18.3■□□□□ 0.52
TRPM1-203ENST00000542188 TNNT3P45378 269 aaPredicted RBP18.28■□□□□ 0.52
TRPM1-203ENST00000542188 FTSJ3Q8IY81 847 aaKnown RBP18.25■□□□□ 0.51
TRPM1-203ENST00000542188 CHMP4BQ9H444 224 aaKnown RBP18.24■□□□□ 0.51
TRPM1-203ENST00000542188 GOLGA6L4A6NEF3 574 aa18.23■□□□□ 0.51
TRPM1-203ENST00000542188 CSRNP3Q8WYN3 585 aa18.22■□□□□ 0.51
TRPM1-203ENST00000542188 MIER1Q8N108 512 aa18.22■□□□□ 0.51
TRPM1-203ENST00000542188 CFAP53Q96M91 514 aa18.21■□□□□ 0.51
TRPM1-203ENST00000542188 DRC7Q8IY82 874 aa18.21■□□□□ 0.51
TRPM1-203ENST00000542188 PPP4R2Q9NY27 417 aa18.19■□□□□ 0.5
TRPM1-203ENST00000542188 A0A0G2JS52 829 aa18.19■□□□□ 0.5
TRPM1-203ENST00000542188 PTMSP20962 102 aa18.19■□□□□ 0.5
TRPM1-203ENST00000542188 PNNQ9H307 717 aaKnown RBP18.19■□□□□ 0.5
TRPM1-203ENST00000542188 EIF4G2P78344 907 aaKnown RBP eCLIP18.18■□□□□ 0.5
TRPM1-203ENST00000542188 HSCBQ8IWL3 235 aa18.18■□□□□ 0.5
TRPM1-203ENST00000542188 FGD1P98174 961 aa18.17■□□□□ 0.5
TRPM1-203ENST00000542188 KIAA2012Q0VF49 1180 aa18.17■□□□□ 0.5
TRPM1-203ENST00000542188 DEKP35659 375 aaKnown RBP18.16■□□□□ 0.5
TRPM1-203ENST00000542188 MS4A1P11836 297 aa18.15■□□□□ 0.5
TRPM1-203ENST00000542188 KDM2AQ9Y2K7 1162 aa18.14■□□□□ 0.49
TRPM1-203ENST00000542188 DCAF1Q9Y4B6 1507 aa18.13■□□□□ 0.49
TRPM1-203ENST00000542188 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.13■□□□□ 0.49
TRPM1-203ENST00000542188 CFAP44Q96MT7 982 aa18.12■□□□□ 0.49
TRPM1-203ENST00000542188 NOC3LQ8WTT2 800 aaKnown RBP18.12■□□□□ 0.49
TRPM1-203ENST00000542188 ZBTB7CA1YPR0 619 aa18.11■□□□□ 0.49
TRPM1-203ENST00000542188 USP35Q9P2H5 1018 aa18.11■□□□□ 0.49
TRPM1-203ENST00000542188 GOLGA6L1Q8N7Z2 621 aa18.1■□□□□ 0.49
TRPM1-203ENST00000542188 MCCP23508 829 aa18.1■□□□□ 0.49
TRPM1-203ENST00000542188 KCNJ4P48050 445 aa18.1■□□□□ 0.49
TRPM1-203ENST00000542188 SUPT16HQ9Y5B9 1047 aaKnown RBP18.09■□□□□ 0.49
TRPM1-203ENST00000542188 RGS3P49796 1198 aa18.08■□□□□ 0.49
TRPM1-203ENST00000542188 CDCA8Q53HL2 280 aa18.08■□□□□ 0.48
TRPM1-203ENST00000542188 PLPPR3Q6T4P5 718 aa18.07■□□□□ 0.48
TRPM1-203ENST00000542188 NAP1L2Q9ULW6 460 aaPredicted RBP18.07■□□□□ 0.48
TRPM1-203ENST00000542188 CLSTN1O94985 981 aa18.06■□□□□ 0.48
TRPM1-203ENST00000542188 OS9Q13438 667 aaPredicted RBP18.05■□□□□ 0.48
TRPM1-203ENST00000542188 TAOK2Q9UL54 1235 aa18.05■□□□□ 0.48
TRPM1-203ENST00000542188 SETQ01105 290 aaPredicted RBP18.04■□□□□ 0.48
TRPM1-203ENST00000542188 C14orf37Q86TY3 774 aa18.04■□□□□ 0.48
TRPM1-203ENST00000542188 NPM1P06748 294 aaKnown RBP eCLIP18.04■□□□□ 0.48
TRPM1-203ENST00000542188 MAPK8IP3Q9UPT6 1336 aa18.04■□□□□ 0.48
TRPM1-203ENST00000542188 ARID4BQ4LE39 1312 aaPredicted RBP18.04■□□□□ 0.48
TRPM1-203ENST00000542188 CHIC2Q9UKJ5 165 aa18.04■□□□□ 0.48
TRPM1-203ENST00000542188 TSPY4P0CV99 314 aa18.03■□□□□ 0.48
TRPM1-203ENST00000542188 TSPY10P0CW01 314 aa18.03■□□□□ 0.48
TRPM1-203ENST00000542188 CALRP27797 417 aaKnown RBP18.03■□□□□ 0.48
TRPM1-203ENST00000542188 GBP4Q96PP9 640 aa18.02■□□□□ 0.47
TRPM1-203ENST00000542188 KNSTRNQ9Y448 316 aa18.02■□□□□ 0.47
TRPM1-203ENST00000542188 TPM4P67936 248 aa18■□□□□ 0.47
TRPM1-203ENST00000542188 NUDCQ9Y266 331 aa17.99■□□□□ 0.47
TRPM1-203ENST00000542188 A0A0U1RQG5 324 aaPredicted RBP17.99■□□□□ 0.47
TRPM1-203ENST00000542188 HTATSF1O43719 755 aaKnown RBP17.98■□□□□ 0.47
TRPM1-203ENST00000542188 SYAP1Q96A49 352 aaPredicted RBP17.98■□□□□ 0.47
TRPM1-203ENST00000542188 NCBP3Q53F19 620 aaKnown RBP17.98■□□□□ 0.47
TRPM1-203ENST00000542188 GNL2Q13823 731 aaKnown RBP17.96■□□□□ 0.47
TRPM1-203ENST00000542188 GOLGA2Q08379 1002 aa17.96■□□□□ 0.46
TRPM1-203ENST00000542188 FRAT1Q92837 279 aaPredicted RBP17.95■□□□□ 0.46
TRPM1-203ENST00000542188 PPP1R15AO75807 674 aaPredicted RBP17.94■□□□□ 0.46
TRPM1-203ENST00000542188 HIRIP3Q9BW71 556 aaPredicted RBP17.94■□□□□ 0.46
TRPM1-203ENST00000542188 ARID3AQ99856 593 aa17.93■□□□□ 0.46
TRPM1-203ENST00000542188 HAP1P54257 671 aaPredicted RBP17.9■□□□□ 0.46
TRPM1-203ENST00000542188 NPHP1O15259 732 aa17.89■□□□□ 0.45
TRPM1-203ENST00000542188 GOLGA6L3A6NEY3 463 aa17.88■□□□□ 0.45
TRPM1-203ENST00000542188 PABPN1Q86U42 306 aaKnown RBP eCLIP17.88■□□□□ 0.45
TRPM1-203ENST00000542188 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.87■□□□□ 0.45
TRPM1-203ENST00000542188 MTUS2Q5JR59 1369 aa17.87■□□□□ 0.45
TRPM1-203ENST00000542188 SPRYD3Q8NCJ5 442 aa17.87■□□□□ 0.45
TRPM1-203ENST00000542188 NEUROD2Q15784 382 aa17.86■□□□□ 0.45
TRPM1-203ENST00000542188 PRM3Q9NNZ6 103 aa17.86■□□□□ 0.45
TRPM1-203ENST00000542188 CCDC34Q96HJ3 373 aa17.85■□□□□ 0.45
TRPM1-203ENST00000542188 HSP90AA2PQ14568 343 aaPredicted RBP17.85■□□□□ 0.45
TRPM1-203ENST00000542188 PLEKHG5O94827 1062 aa17.84■□□□□ 0.45
TRPM1-203ENST00000542188 CSPP1Q1MSJ5 1256 aa17.84■□□□□ 0.45
TRPM1-203ENST00000542188 B4GALNT3Q6L9W6 998 aa17.84■□□□□ 0.45
TRPM1-203ENST00000542188 RSPH6AQ9H0K4 717 aa17.83■□□□□ 0.44
TRPM1-203ENST00000542188 KIAA1211Q6ZU35 1233 aa17.82■□□□□ 0.44
TRPM1-203ENST00000542188 TPM3P06753 285 aa17.8■□□□□ 0.44
TRPM1-203ENST00000542188 RBM19Q9Y4C8 960 aaKnown RBP17.8■□□□□ 0.44
TRPM1-203ENST00000542188 CARD11Q9BXL7 1154 aa17.78■□□□□ 0.44
TRPM1-203ENST00000542188 GZF1Q9H116 711 aaPredicted RBP17.78■□□□□ 0.44
TRPM1-203ENST00000542188 PHF14O94880 888 aa17.77■□□□□ 0.44
TRPM1-203ENST00000542188 GPS2Q13227 327 aa17.76■□□□□ 0.43
TRPM1-203ENST00000542188 ISY1Q9ULR0 285 aaKnown RBP17.76■□□□□ 0.43
TRPM1-203ENST00000542188 CEP89Q96ST8 783 aa17.76■□□□□ 0.43
TRPM1-203ENST00000542188 SENP3-EIF4A1A0A087X0R7 540 aa17.74■□□□□ 0.43
TRPM1-203ENST00000542188 RRP7BPQ9NSQ0 103 aa17.73■□□□□ 0.43
TRPM1-203ENST00000542188 CALD1Q05682 793 aaKnown RBP17.73■□□□□ 0.43
TRPM1-203ENST00000542188 TCERG1O14776 1098 aaKnown RBP17.72■□□□□ 0.43
TRPM1-203ENST00000542188 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
TRPM1-203ENST00000542188 U2SURPO15042 1029 aaKnown RBP17.71■□□□□ 0.43
TRPM1-203ENST00000542188 RGL3Q3MIN7 710 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms