RNA–Protein interactions for RNA: ENST00000540849.5

PRICKLE3-205, Transcript of prickle planar cell polarity protein 3, humanhuman

TSL 2

Gene PRICKLE3, Length 2,246 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3-205ENST00000540849 PCF11O94913 1555 aaKnown RBP19.37■□□□□ 0.69
PRICKLE3-205ENST00000540849 CC2D2AQ9P2K1 1620 aa19.37■□□□□ 0.69
PRICKLE3-205ENST00000540849 FANCD2Q9BXW9 1451 aa19.35■□□□□ 0.69
PRICKLE3-205ENST00000540849 PHLDB1Q86UU1 1377 aa19.34■□□□□ 0.69
PRICKLE3-205ENST00000540849 FHAD1B1AJZ9 1412 aa19.32■□□□□ 0.68
PRICKLE3-205ENST00000540849 DNMBPQ6XZF7 1577 aa19.32■□□□□ 0.68
PRICKLE3-205ENST00000540849 SETD5Q9C0A6 1442 aa19.3■□□□□ 0.68
PRICKLE3-205ENST00000540849 RAD54L2Q9Y4B4 1467 aa19.29■□□□□ 0.68
PRICKLE3-205ENST00000540849 ABCA10Q8WWZ4 1543 aa19.28■□□□□ 0.68
PRICKLE3-205ENST00000540849 TOPBP1Q92547 1522 aa19.26■□□□□ 0.67
PRICKLE3-205ENST00000540849 FHOD3Q2V2M9 1422 aa19.26■□□□□ 0.67
PRICKLE3-205ENST00000540849 POLA1P09884 1462 aaPredicted RBP19.25■□□□□ 0.67
PRICKLE3-205ENST00000540849 EFCAB5A4FU69 1503 aa19.25■□□□□ 0.67
PRICKLE3-205ENST00000540849 P3H3Q8IVL6 736 aa19.24■□□□□ 0.67
PRICKLE3-205ENST00000540849 FYCO1Q9BQS8 1478 aa19.24■□□□□ 0.67
PRICKLE3-205ENST00000540849 CUL7Q14999 1698 aa19.24■□□□□ 0.67
PRICKLE3-205ENST00000540849 CTTNBP2Q8WZ74 1663 aa19.24■□□□□ 0.67
PRICKLE3-205ENST00000540849 FAM50AQ14320 339 aaKnown RBP19.21■□□□□ 0.67
PRICKLE3-205ENST00000540849 CASKIN1Q8WXD9 1431 aa19.2■□□□□ 0.66
PRICKLE3-205ENST00000540849 AQRO60306 1485 aaKnown RBP eCLIP19.19■□□□□ 0.668e-7■■■■□ 26.6
PRICKLE3-205ENST00000540849 NESP48681 1621 aa19.19■□□□□ 0.66
PRICKLE3-205ENST00000540849 WDR97A6NE52 1622 aa19.18■□□□□ 0.66
PRICKLE3-205ENST00000540849 ATP1B4Q9UN42 357 aaPredicted RBP19.16■□□□□ 0.66
PRICKLE3-205ENST00000540849 SIN3AQ96ST3 1273 aa19.13■□□□□ 0.65
PRICKLE3-205ENST00000540849 SNAPC4Q5SXM2 1469 aa19.12■□□□□ 0.65
PRICKLE3-205ENST00000540849 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.12■□□□□ 0.65
PRICKLE3-205ENST00000540849 URB2Q14146 1524 aaKnown RBP19.1■□□□□ 0.65
PRICKLE3-205ENST00000540849 FMN1Q68DA7 1419 aa19.08■□□□□ 0.65
PRICKLE3-205ENST00000540849 ABCA5Q8WWZ7 1642 aa19.08■□□□□ 0.65
PRICKLE3-205ENST00000540849 SAMD9Q5K651 1589 aa19.08■□□□□ 0.64
PRICKLE3-205ENST00000540849 LRRIQ1Q96JM4 1722 aa19.08■□□□□ 0.64
PRICKLE3-205ENST00000540849 FGD6Q6ZV73 1430 aa19.07■□□□□ 0.64
PRICKLE3-205ENST00000540849 SUPT16HQ9Y5B9 1047 aaKnown RBP19.06■□□□□ 0.64
PRICKLE3-205ENST00000540849 LAMC3Q9Y6N6 1575 aa19.06■□□□□ 0.64
PRICKLE3-205ENST00000540849 KCNH8Q96L42 1107 aa19.05■□□□□ 0.64
PRICKLE3-205ENST00000540849 TIMELESSQ9UNS1 1208 aa19.02■□□□□ 0.64
PRICKLE3-205ENST00000540849 CCDC18Q5T9S5 1454 aa19■□□□□ 0.63
PRICKLE3-205ENST00000540849 GRIN2BQ13224 1484 aa19■□□□□ 0.63
PRICKLE3-205ENST00000540849 PTPN23Q9H3S7 1636 aa18.99■□□□□ 0.63
PRICKLE3-205ENST00000540849 MTUS2Q5JR59 1369 aa18.99■□□□□ 0.63
PRICKLE3-205ENST00000540849 PTPRKQ15262 1439 aa18.99■□□□□ 0.63
PRICKLE3-205ENST00000540849 TDRD9Q8NDG6 1382 aaKnown RBP18.99■□□□□ 0.63
PRICKLE3-205ENST00000540849 GAPVD1Q14C86 1478 aa18.98■□□□□ 0.63
PRICKLE3-205ENST00000540849 DDX10Q13206 875 aaKnown RBP18.98■□□□□ 0.63
PRICKLE3-205ENST00000540849 THOC2Q8NI27 1593 aaKnown RBP18.98■□□□□ 0.63
PRICKLE3-205ENST00000540849 PPP1R15AO75807 674 aaPredicted RBP18.97■□□□□ 0.63
PRICKLE3-205ENST00000540849 HFM1A2PYH4 1435 aa18.97■□□□□ 0.63
PRICKLE3-205ENST00000540849 NCOA2Q15596 1464 aa18.96■□□□□ 0.63
PRICKLE3-205ENST00000540849 SUPT6HQ7KZ85 1726 aaKnown RBP18.95■□□□□ 0.62
PRICKLE3-205ENST00000540849 MYOM3Q5VTT5 1437 aa18.94■□□□□ 0.62
PRICKLE3-205ENST00000540849 KIF21AQ7Z4S6 1674 aa18.94■□□□□ 0.62
PRICKLE3-205ENST00000540849 EHBP1L1Q8N3D4 1523 aa18.94■□□□□ 0.62
PRICKLE3-205ENST00000540849 UACAQ9BZF9 1416 aa18.93■□□□□ 0.62
PRICKLE3-205ENST00000540849 MYT1Q01538 1121 aa18.92■□□□□ 0.62
PRICKLE3-205ENST00000540849 HIRIP3Q9BW71 556 aaPredicted RBP18.9■□□□□ 0.62
PRICKLE3-205ENST00000540849 NAIPQ13075 1403 aa18.9■□□□□ 0.62
PRICKLE3-205ENST00000540849 UGGT2Q9NYU1 1516 aa18.9■□□□□ 0.62
PRICKLE3-205ENST00000540849 MAGI3Q5TCQ9 1506 aa18.89■□□□□ 0.61
PRICKLE3-205ENST00000540849 TONSLQ96HA7 1378 aa18.89■□□□□ 0.61
PRICKLE3-205ENST00000540849 ARHGEF11O15085 1522 aa18.89■□□□□ 0.61
PRICKLE3-205ENST00000540849 TARBP1Q13395 1621 aaKnown RBP18.88■□□□□ 0.61
PRICKLE3-205ENST00000540849 PDS5BQ9NTI5 1447 aa18.88■□□□□ 0.61
PRICKLE3-205ENST00000540849 KDM5BQ9UGL1 1544 aa18.84■□□□□ 0.61
PRICKLE3-205ENST00000540849 PBRM1Q86U86 1689 aa18.84■□□□□ 0.61
PRICKLE3-205ENST00000540849 GCC2Q8IWJ2 1684 aa18.83■□□□□ 0.6
PRICKLE3-205ENST00000540849 HECW1Q76N89 1606 aa18.83■□□□□ 0.6
PRICKLE3-205ENST00000540849 TCOF1Q13428 1488 aaKnown RBP18.82■□□□□ 0.6
PRICKLE3-205ENST00000540849 CCER2I3L3R5 266 aa18.81■□□□□ 0.6
PRICKLE3-205ENST00000540849 ANP32CO43423 234 aa18.78■□□□□ 0.6
PRICKLE3-205ENST00000540849 IQGAP2Q13576 1575 aa18.78■□□□□ 0.6
PRICKLE3-205ENST00000540849 ADAMTS12P58397 1594 aa18.77■□□□□ 0.6
PRICKLE3-205ENST00000540849 TSHZ2Q9NRE2 1034 aa18.77■□□□□ 0.59
PRICKLE3-205ENST00000540849 DENND4BO75064 1496 aaPredicted RBP18.75■□□□□ 0.59
PRICKLE3-205ENST00000540849 KDM6BO15054 1643 aa18.75■□□□□ 0.59
PRICKLE3-205ENST00000540849 EPRSP07814 1512 aaKnown RBP18.75■□□□□ 0.59
PRICKLE3-205ENST00000540849 WDR62O43379 1518 aa18.74■□□□□ 0.59
PRICKLE3-205ENST00000540849 AKNAQ7Z591 1439 aa18.73■□□□□ 0.59
PRICKLE3-205ENST00000540849 CDK13Q14004 1512 aaKnown RBP18.73■□□□□ 0.59
PRICKLE3-205ENST00000540849 RRP7BPQ9NSQ0 103 aa18.73■□□□□ 0.59
PRICKLE3-205ENST00000540849 BCANQ96GW7 911 aa18.72■□□□□ 0.59
PRICKLE3-205ENST00000540849 FKBP8Q14318 412 aa18.71■□□□□ 0.59
PRICKLE3-205ENST00000540849 CHIC2Q9UKJ5 165 aa18.7■□□□□ 0.58
PRICKLE3-205ENST00000540849 TRIM52Q96A61 297 aa18.69■□□□□ 0.58
PRICKLE3-205ENST00000540849 MIA2Q96PC5 1412 aa18.68■□□□□ 0.58
PRICKLE3-205ENST00000540849 MRC2Q9UBG0 1479 aa18.63■□□□□ 0.57
PRICKLE3-205ENST00000540849 HSPA5P11021 654 aaKnown RBP18.61■□□□□ 0.57
PRICKLE3-205ENST00000540849 ARID3CA6NKF2 412 aa18.6■□□□□ 0.57
PRICKLE3-205ENST00000540849 NEFLP07196 543 aa18.6■□□□□ 0.57
PRICKLE3-205ENST00000540849 WASHC2AQ641Q2 1341 aa18.6■□□□□ 0.57
PRICKLE3-205ENST00000540849 KIAA0556O60303 1618 aa18.6■□□□□ 0.57
PRICKLE3-205ENST00000540849 MPHOSPH9Q99550 1183 aa18.59■□□□□ 0.57
PRICKLE3-205ENST00000540849 DNMT1P26358 1616 aaKnown RBP18.58■□□□□ 0.57
PRICKLE3-205ENST00000540849 DAPK1P53355 1430 aa18.58■□□□□ 0.56
PRICKLE3-205ENST00000540849 DISP1Q96F81 1524 aa18.56■□□□□ 0.56
PRICKLE3-205ENST00000540849 ZNF608Q9ULD9 1512 aaPredicted RBP18.56■□□□□ 0.56
PRICKLE3-205ENST00000540849 ROCK1Q13464 1354 aa18.55■□□□□ 0.56
PRICKLE3-205ENST00000540849 FOXD1Q16676 465 aa18.54■□□□□ 0.56
PRICKLE3-205ENST00000540849 NUP153P49790 1475 aaKnown RBP18.54■□□□□ 0.56
PRICKLE3-205ENST00000540849 RAPGEF6Q8TEU7 1601 aa18.54■□□□□ 0.56
PRICKLE3-205ENST00000540849 ABCC5O15440 1437 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms