RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 ZNF692Q9BU19 519 aaPredicted RBP15.94■□□□□ 0.14
MDH1-215ENST00000539945 WRNQ14191 1432 aaPredicted RBP eCLIP15.93■□□□□ 0.14
MDH1-215ENST00000539945 CADPSQ9ULU8 1353 aa15.92■□□□□ 0.14
MDH1-215ENST00000539945 PRDM2Q13029 1718 aa15.89■□□□□ 0.13
MDH1-215ENST00000539945 SSUH2Q9Y2M2 353 aa15.89■□□□□ 0.13
MDH1-215ENST00000539945 C19orf67A6NJJ6 358 aa15.85■□□□□ 0.13
MDH1-215ENST00000539945 SYNJ1O43426 1573 aa15.85■□□□□ 0.13
MDH1-215ENST00000539945 MKRN4PQ13434 485 aaPredicted RBP15.82■□□□□ 0.12
MDH1-215ENST00000539945 TOP2BQ02880 1626 aa15.8■□□□□ 0.12
MDH1-215ENST00000539945 BIVM-ERCC5R4GMW8 1640 aa15.79■□□□□ 0.12
MDH1-215ENST00000539945 LAMC3Q9Y6N6 1575 aa15.78■□□□□ 0.12
MDH1-215ENST00000539945 LOC105371045A0A1W2PR82 267 aa15.77■□□□□ 0.12
MDH1-215ENST00000539945 FAM9AQ8IZU1 332 aaPredicted RBP15.77■□□□□ 0.12
MDH1-215ENST00000539945 EEA1Q15075 1411 aa15.75■□□□□ 0.11
MDH1-215ENST00000539945 CUX1P39880 1505 aa15.74■□□□□ 0.11
MDH1-215ENST00000539945 NESP48681 1621 aa15.73■□□□□ 0.11
MDH1-215ENST00000539945 FANCD2Q9BXW9 1451 aa15.73■□□□□ 0.11
MDH1-215ENST00000539945 SOGA1O94964 1423 aa15.73■□□□□ 0.11
MDH1-215ENST00000539945 PRR29P0C7W0 189 aa15.72■□□□□ 0.11
MDH1-215ENST00000539945 GABBR2O75899 941 aa15.71■□□□□ 0.11
MDH1-215ENST00000539945 CHADLQ6NUI6 762 aa15.66■□□□□ 0.1
MDH1-215ENST00000539945 RUSC2Q8N2Y8 1516 aa15.66■□□□□ 0.1
MDH1-215ENST00000539945 PDS5BQ9NTI5 1447 aa15.65■□□□□ 0.1
MDH1-215ENST00000539945 CSRNP3Q8WYN3 585 aa15.64■□□□□ 0.09
MDH1-215ENST00000539945 CEP164Q9UPV0 1460 aa15.62■□□□□ 0.09
MDH1-215ENST00000539945 LHX8Q68G74 356 aa15.61■□□□□ 0.09
MDH1-215ENST00000539945 DNMBPQ6XZF7 1577 aa15.6■□□□□ 0.09
MDH1-215ENST00000539945 TOPBP1Q92547 1522 aa15.57■□□□□ 0.08
MDH1-215ENST00000539945 FGD5Q6ZNL6 1462 aa15.56■□□□□ 0.08
MDH1-215ENST00000539945 KIF21AQ7Z4S6 1674 aa15.55■□□□□ 0.08
MDH1-215ENST00000539945 CLCN6P51797 869 aa15.54■□□□□ 0.08
MDH1-215ENST00000539945 KIF27Q86VH2 1401 aa15.54■□□□□ 0.08
MDH1-215ENST00000539945 URB2Q14146 1524 aaKnown RBP15.53■□□□□ 0.08
MDH1-215ENST00000539945 KIF21BO75037 1637 aa15.52■□□□□ 0.08
MDH1-215ENST00000539945 EHMT2Q96KQ7 1210 aa15.51■□□□□ 0.07
MDH1-215ENST00000539945 GOLGA3Q08378 1498 aa15.5■□□□□ 0.07
MDH1-215ENST00000539945 CD44P16070 742 aaKnown RBP15.5■□□□□ 0.07
MDH1-215ENST00000539945 POLA1P09884 1462 aaPredicted RBP15.49■□□□□ 0.07
MDH1-215ENST00000539945 TNIKQ9UKE5 1360 aa15.48■□□□□ 0.07
MDH1-215ENST00000539945 CUX2O14529 1486 aa15.47■□□□□ 0.07
MDH1-215ENST00000539945 FARP1Q9Y4F1 1045 aaPredicted RBP15.45■□□□□ 0.06
MDH1-215ENST00000539945 ABCA10Q8WWZ4 1543 aa15.45■□□□□ 0.06
MDH1-215ENST00000539945 PRXQ9BXM0 1461 aa15.45■□□□□ 0.06
MDH1-215ENST00000539945 MRC2Q9UBG0 1479 aa15.45■□□□□ 0.06
MDH1-215ENST00000539945 RAD54L2Q9Y4B4 1467 aa15.42■□□□□ 0.06
MDH1-215ENST00000539945 ERICH3Q5RHP9 1530 aa15.42■□□□□ 0.06
MDH1-215ENST00000539945 UBTFP17480 764 aaKnown RBP15.41■□□□□ 0.06
MDH1-215ENST00000539945 RAPGEF2Q9Y4G8 1499 aa15.41■□□□□ 0.06
MDH1-215ENST00000539945 IGF1RP08069 1367 aa15.4■□□□□ 0.06
MDH1-215ENST00000539945 WDR97A6NE52 1622 aa15.38■□□□□ 0.05
MDH1-215ENST00000539945 CEP162Q5TB80 1403 aa15.37■□□□□ 0.05
MDH1-215ENST00000539945 WDR62O43379 1518 aa15.37■□□□□ 0.05
MDH1-215ENST00000539945 ERCC6Q03468 1493 aa15.35■□□□□ 0.05
MDH1-215ENST00000539945 TARBP1Q13395 1621 aaKnown RBP15.34■□□□□ 0.05
MDH1-215ENST00000539945 DCBLD2Q96PD2 775 aa15.32■□□□□ 0.04
MDH1-215ENST00000539945 ABCA5Q8WWZ7 1642 aa15.31■□□□□ 0.04
MDH1-215ENST00000539945 CARMIL1Q5VZK9 1371 aa15.31■□□□□ 0.04
MDH1-215ENST00000539945 THOC2Q8NI27 1593 aaKnown RBP15.3■□□□□ 0.04
MDH1-215ENST00000539945 TDRD9Q8NDG6 1382 aaKnown RBP15.28■□□□□ 0.04
MDH1-215ENST00000539945 STAG3Q9UJ98 1225 aa15.28■□□□□ 0.04
MDH1-215ENST00000539945 GAPVD1Q14C86 1478 aa15.28■□□□□ 0.04
MDH1-215ENST00000539945 POTEIP0CG38 1075 aa15.27■□□□□ 0.04
MDH1-215ENST00000539945 CUL7Q14999 1698 aa15.27■□□□□ 0.03
MDH1-215ENST00000539945 IFT140Q96RY7 1462 aa15.27■□□□□ 0.03
MDH1-215ENST00000539945 CLIP1P30622 1438 aa15.26■□□□□ 0.03
MDH1-215ENST00000539945 ZNF579Q8NAF0 562 aaKnown RBP15.24■□□□□ 0.03
MDH1-215ENST00000539945 ZRANB1Q9UGI0 708 aa15.2■□□□□ 0.02
MDH1-215ENST00000539945 AQRO60306 1485 aaKnown RBP eCLIP15.17■□□□□ 0.026e-7■■■■□ 21.6
MDH1-215ENST00000539945 PBRM1Q86U86 1689 aa15.17■□□□□ 0.02
MDH1-215ENST00000539945 GRIN2BQ13224 1484 aa15.16■□□□□ 0.02
MDH1-215ENST00000539945 ZNF608Q9ULD9 1512 aaPredicted RBP15.16■□□□□ 0.02
MDH1-215ENST00000539945 PAK3O75914 559 aaPredicted RBP15.14■□□□□ 0.01
MDH1-215ENST00000539945 VPS8Q8N3P4 1428 aa15.13■□□□□ 0.01
MDH1-215ENST00000539945 FHAD1B1AJZ9 1412 aa15.12■□□□□ 0.01
MDH1-215ENST00000539945 TRIM26Q12899 539 aaPredicted RBP15.11■□□□□ 0.01
MDH1-215ENST00000539945 CREBZFQ9NS37 354 aa15.11■□□□□ 0.01
MDH1-215ENST00000539945 EIF4G3O43432 1585 aaKnown RBP15.11■□□□□ 0.01
MDH1-215ENST00000539945 RANGAP1P46060 587 aaPredicted RBP15.1■□□□□ 0.01
MDH1-215ENST00000539945 ADAMTS12P58397 1594 aa15.1■□□□□ 0.01
MDH1-215ENST00000539945 ARAP1Q96P48 1450 aa15.1■□□□□ 0.01
MDH1-215ENST00000539945 ARHGAP35Q9NRY4 1499 aa15.1■□□□□ 0.01
MDH1-215ENST00000539945 CTTNBP2Q8WZ74 1663 aa15.09■□□□□ 0.01
MDH1-215ENST00000539945 PCGF6Q9BYE7 350 aa15.08■□□□□ 0
MDH1-215ENST00000539945 MAGI1Q96QZ7 1491 aaPredicted RBP15.04■□□□□ -0
MDH1-215ENST00000539945 SNAPC4Q5SXM2 1469 aa15.03■□□□□ -0
MDH1-215ENST00000539945 EFCAB5A4FU69 1503 aa15.02■□□□□ -0
MDH1-215ENST00000539945 NPM1P06748 294 aaKnown RBP eCLIP15.01□□□□□ -0.01
MDH1-215ENST00000539945 SPDYE4A6NLX3 237 aa15□□□□□ -0.01
MDH1-215ENST00000539945 GALR2O43603 387 aaPredicted RBP15□□□□□ -0.01
MDH1-215ENST00000539945 PPARGC1BQ86YN6 1023 aaKnown RBP15□□□□□ -0.01
MDH1-215ENST00000539945 PLSCR2Q9NRY7 297 aa14.99□□□□□ -0.01
MDH1-215ENST00000539945 SYNJ2O15056 1496 aa14.97□□□□□ -0.01
MDH1-215ENST00000539945 GRIN2AQ12879 1464 aa14.97□□□□□ -0.01
MDH1-215ENST00000539945 SAMD9Q5K651 1589 aa14.96□□□□□ -0.02
MDH1-215ENST00000539945 IQGAP2Q13576 1575 aa14.94□□□□□ -0.02
MDH1-215ENST00000539945 CHMP7Q8WUX9 453 aaPredicted RBP14.92□□□□□ -0.02
MDH1-215ENST00000539945 KIAA0586Q9BVV6 1533 aa14.92□□□□□ -0.02
MDH1-215ENST00000539945 FHOD3Q2V2M9 1422 aa14.91□□□□□ -0.02
MDH1-215ENST00000539945 P3H3Q8IVL6 736 aa14.9□□□□□ -0.02
MDH1-215ENST00000539945 MAP3K1Q13233 1512 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms