RNA–Protein interactions for RNA: ENST00000539429.1

GTF2H3-207, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 2

Gene GTF2H3, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-207ENST00000539429 DNMBPQ6XZF7 1577 aa16.6■□□□□ 0.25
GTF2H3-207ENST00000539429 TOPBP1Q92547 1522 aa16.59■□□□□ 0.25
GTF2H3-207ENST00000539429 OSCARQ8IYS5 282 aa16.54■□□□□ 0.24
GTF2H3-207ENST00000539429 IFT140Q96RY7 1462 aa16.5■□□□□ 0.23
GTF2H3-207ENST00000539429 PROM2Q8N271 834 aa16.5■□□□□ 0.23
GTF2H3-207ENST00000539429 SPDYE2BA6NHP3 402 aa16.46■□□□□ 0.23
GTF2H3-207ENST00000539429 SPDYE6P0CI01 402 aa16.46■□□□□ 0.23
GTF2H3-207ENST00000539429 SPDYE2Q495Y8 402 aa16.46■□□□□ 0.23
GTF2H3-207ENST00000539429 ZNF692Q9BU19 519 aaPredicted RBP16.45■□□□□ 0.22
GTF2H3-207ENST00000539429 CUX1P39880 1505 aa16.45■□□□□ 0.22
GTF2H3-207ENST00000539429 POLA1P09884 1462 aaPredicted RBP16.44■□□□□ 0.22
GTF2H3-207ENST00000539429 FGD5Q6ZNL6 1462 aa16.42■□□□□ 0.22
GTF2H3-207ENST00000539429 DNAJC5Q9H3Z4 198 aa16.42■□□□□ 0.22
GTF2H3-207ENST00000539429 TARBP1Q13395 1621 aaKnown RBP16.41■□□□□ 0.22
GTF2H3-207ENST00000539429 ZNF608Q9ULD9 1512 aaPredicted RBP16.41■□□□□ 0.22
GTF2H3-207ENST00000539429 SOGA1O94964 1423 aa16.4■□□□□ 0.22
GTF2H3-207ENST00000539429 EIF4G3O43432 1585 aaKnown RBP16.39■□□□□ 0.21
GTF2H3-207ENST00000539429 RAD54L2Q9Y4B4 1467 aa16.39■□□□□ 0.21
GTF2H3-207ENST00000539429 FBXO3Q9UK99 471 aa16.37■□□□□ 0.21
GTF2H3-207ENST00000539429 SSUH2Q9Y2M2 353 aa16.37■□□□□ 0.21
GTF2H3-207ENST00000539429 WRNQ14191 1432 aaPredicted RBP eCLIP16.36■□□□□ 0.21
GTF2H3-207ENST00000539429 AQRO60306 1485 aaKnown RBP eCLIP16.34■□□□□ 0.218e-7■■■□□ 16.1
GTF2H3-207ENST00000539429 BIVM-ERCC5R4GMW8 1640 aa16.34■□□□□ 0.21
GTF2H3-207ENST00000539429 TOP2BQ02880 1626 aa16.32■□□□□ 0.2
GTF2H3-207ENST00000539429 SYNJ1O43426 1573 aa16.31■□□□□ 0.2
GTF2H3-207ENST00000539429 TDRD9Q8NDG6 1382 aaKnown RBP16.31■□□□□ 0.2
GTF2H3-207ENST00000539429 WDR97A6NE52 1622 aa16.3■□□□□ 0.2
GTF2H3-207ENST00000539429 PBRM1Q86U86 1689 aa16.26■□□□□ 0.19
GTF2H3-207ENST00000539429 CHD1O14646 1710 aa16.25■□□□□ 0.19
GTF2H3-207ENST00000539429 GAPVD1Q14C86 1478 aa16.22■□□□□ 0.19
GTF2H3-207ENST00000539429 ABCA10Q8WWZ4 1543 aa16.22■□□□□ 0.19
GTF2H3-207ENST00000539429 GRIN2BQ13224 1484 aa16.21■□□□□ 0.19
GTF2H3-207ENST00000539429 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
GTF2H3-207ENST00000539429 SNAPC4Q5SXM2 1469 aa16.2■□□□□ 0.18
GTF2H3-207ENST00000539429 ABCA5Q8WWZ7 1642 aa16.18■□□□□ 0.18
GTF2H3-207ENST00000539429 CHMP7Q8WUX9 453 aaPredicted RBP16.17■□□□□ 0.18
GTF2H3-207ENST00000539429 MAGI1Q96QZ7 1491 aaPredicted RBP16.16■□□□□ 0.18
GTF2H3-207ENST00000539429 VASPP50552 380 aaPredicted RBP16.12■□□□□ 0.17
GTF2H3-207ENST00000539429 SYNJ2O15056 1496 aa16.1■□□□□ 0.17
GTF2H3-207ENST00000539429 AMER1Q5JTC6 1135 aaPredicted RBP16.09■□□□□ 0.17
GTF2H3-207ENST00000539429 AKT1S1Q96B36 256 aa16.07■□□□□ 0.16
GTF2H3-207ENST00000539429 STAG3Q9UJ98 1225 aa16.06■□□□□ 0.16
GTF2H3-207ENST00000539429 ERICH3Q5RHP9 1530 aa16.05■□□□□ 0.16
GTF2H3-207ENST00000539429 ADAMTS12P58397 1594 aa16.04■□□□□ 0.16
GTF2H3-207ENST00000539429 KIF27Q86VH2 1401 aa16.04■□□□□ 0.16
GTF2H3-207ENST00000539429 TRIM41Q8WV44 630 aa16.03■□□□□ 0.16
GTF2H3-207ENST00000539429 RTN4Q9NQC3 1192 aaKnown RBP16.03■□□□□ 0.16
GTF2H3-207ENST00000539429 RIMBP3CA6NJZ7 1639 aa16.01■□□□□ 0.15
GTF2H3-207ENST00000539429 RIMBP3BA6NNM3 1639 aa16.01■□□□□ 0.15
GTF2H3-207ENST00000539429 RIMBP3Q9UFD9 1639 aa16.01■□□□□ 0.15
GTF2H3-207ENST00000539429 FHAD1B1AJZ9 1412 aa16.01■□□□□ 0.15
GTF2H3-207ENST00000539429 GRIN2AQ12879 1464 aa16■□□□□ 0.15
GTF2H3-207ENST00000539429 ARHGEF11O15085 1522 aa15.98■□□□□ 0.15
GTF2H3-207ENST00000539429 CUL7Q14999 1698 aa15.96■□□□□ 0.15
GTF2H3-207ENST00000539429 CLASP1Q7Z460 1538 aa15.96■□□□□ 0.15
GTF2H3-207ENST00000539429 IFNLR1Q8IU57 520 aaPredicted RBP15.93■□□□□ 0.14
GTF2H3-207ENST00000539429 CEP170Q5SW79 1584 aa15.92■□□□□ 0.14
GTF2H3-207ENST00000539429 IGF1RP08069 1367 aa15.9■□□□□ 0.14
GTF2H3-207ENST00000539429 REM2Q8IYK8 340 aaPredicted RBP15.9■□□□□ 0.14
GTF2H3-207ENST00000539429 SPDYE1Q8NFV5 336 aaPredicted RBP15.9■□□□□ 0.14
GTF2H3-207ENST00000539429 CYB5RLQ6IPT4 315 aa15.89■□□□□ 0.13
GTF2H3-207ENST00000539429 NUP160Q12769 1436 aa15.87■□□□□ 0.13
GTF2H3-207ENST00000539429 CARMIL1Q5VZK9 1371 aa15.87■□□□□ 0.13
GTF2H3-207ENST00000539429 PLCD3Q8N3E9 789 aa15.85■□□□□ 0.13
GTF2H3-207ENST00000539429 RUSC2Q8N2Y8 1516 aa15.84■□□□□ 0.13
GTF2H3-207ENST00000539429 MIER1Q8N108 512 aa15.84■□□□□ 0.13
GTF2H3-207ENST00000539429 ARAP1Q96P48 1450 aa15.82■□□□□ 0.12
GTF2H3-207ENST00000539429 CLEC11AQ9Y240 323 aa15.81■□□□□ 0.12
GTF2H3-207ENST00000539429 SHROOM2Q13796 1616 aa15.79■□□□□ 0.12
GTF2H3-207ENST00000539429 KLHL34Q8N239 644 aa15.78■□□□□ 0.12
GTF2H3-207ENST00000539429 RAPGEF2Q9Y4G8 1499 aa15.78■□□□□ 0.12
GTF2H3-207ENST00000539429 JPH4Q96JJ6 628 aa15.77■□□□□ 0.12
GTF2H3-207ENST00000539429 PRG4Q92954 1404 aaPredicted RBP15.76■□□□□ 0.11
GTF2H3-207ENST00000539429 ERCC6L2Q5T890 1561 aa15.75■□□□□ 0.11
GTF2H3-207ENST00000539429 KIAA0586Q9BVV6 1533 aa15.75■□□□□ 0.11
GTF2H3-207ENST00000539429 PLEKHG5O94827 1062 aa15.75■□□□□ 0.11
GTF2H3-207ENST00000539429 FAM9AQ8IZU1 332 aaPredicted RBP15.74■□□□□ 0.11
GTF2H3-207ENST00000539429 IQGAP2Q13576 1575 aa15.72■□□□□ 0.11
GTF2H3-207ENST00000539429 PRR29P0C7W0 189 aa15.72■□□□□ 0.11
GTF2H3-207ENST00000539429 CTTNBP2Q8WZ74 1663 aa15.72■□□□□ 0.11
GTF2H3-207ENST00000539429 PITPNM1O00562 1244 aa15.71■□□□□ 0.11
GTF2H3-207ENST00000539429 EEA1Q15075 1411 aa15.69■□□□□ 0.1
GTF2H3-207ENST00000539429 SPOCK2Q92563 424 aa15.69■□□□□ 0.1
GTF2H3-207ENST00000539429 TTBK1Q5TCY1 1321 aaPredicted RBP15.68■□□□□ 0.1
GTF2H3-207ENST00000539429 ZBTB47Q9UFB7 747 aaPredicted RBP15.67■□□□□ 0.1
GTF2H3-207ENST00000539429 CARMIL2Q6F5E8 1435 aa15.66■□□□□ 0.1
GTF2H3-207ENST00000539429 PRXQ9BXM0 1461 aa15.64■□□□□ 0.09
GTF2H3-207ENST00000539429 NPM1P06748 294 aaKnown RBP eCLIP15.59■□□□□ 0.09
GTF2H3-207ENST00000539429 CREBZFQ9NS37 354 aa15.59■□□□□ 0.09
GTF2H3-207ENST00000539429 PTPRGP23470 1445 aa15.57■□□□□ 0.08
GTF2H3-207ENST00000539429 UGGT2Q9NYU1 1516 aa15.57■□□□□ 0.08
GTF2H3-207ENST00000539429 TNIKQ9UKE5 1360 aa15.56■□□□□ 0.08
GTF2H3-207ENST00000539429 KIAA0556O60303 1618 aa15.54■□□□□ 0.08
GTF2H3-207ENST00000539429 KIF21BO75037 1637 aa15.54■□□□□ 0.08
GTF2H3-207ENST00000539429 GOLGA3Q08378 1498 aa15.54■□□□□ 0.08
GTF2H3-207ENST00000539429 RANGAP1P46060 587 aaPredicted RBP15.54■□□□□ 0.08
GTF2H3-207ENST00000539429 DISP1Q96F81 1524 aa15.53■□□□□ 0.08
GTF2H3-207ENST00000539429 ADCY10Q96PN6 1610 aa15.51■□□□□ 0.07
GTF2H3-207ENST00000539429 UBTFP17480 764 aaKnown RBP15.51■□□□□ 0.07
GTF2H3-207ENST00000539429 PKD2Q13563 968 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms