RNA–Protein interactions for RNA: ENST00000537796.2

NECAP1-203, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,418 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-203ENST00000537796 SIN3AQ96ST3 1273 aa10.94□□□□□ -0.66
NECAP1-203ENST00000537796 PHLDB1Q86UU1 1377 aa10.94□□□□□ -0.66
NECAP1-203ENST00000537796 HIRIP3Q9BW71 556 aaPredicted RBP10.93□□□□□ -0.66
NECAP1-203ENST00000537796 POLA1P09884 1462 aaPredicted RBP10.92□□□□□ -0.66
NECAP1-203ENST00000537796 RAB3GAP2Q9H2M9 1393 aa10.91□□□□□ -0.66
NECAP1-203ENST00000537796 RRBP1Q9P2E9 1410 aaKnown RBP10.91□□□□□ -0.66
NECAP1-203ENST00000537796 TOPBP1Q92547 1522 aa10.91□□□□□ -0.66
NECAP1-203ENST00000537796 PRDM2Q13029 1718 aa10.87□□□□□ -0.67
NECAP1-203ENST00000537796 KCNH8Q96L42 1107 aa10.86□□□□□ -0.67
NECAP1-203ENST00000537796 LRRC9Q6ZRR7 1453 aa10.86□□□□□ -0.67
NECAP1-203ENST00000537796 URB2Q14146 1524 aaKnown RBP10.86□□□□□ -0.67
NECAP1-203ENST00000537796 TIAM1Q13009 1591 aa10.86□□□□□ -0.67
NECAP1-203ENST00000537796 PCF11O94913 1555 aaKnown RBP10.85□□□□□ -0.67
NECAP1-203ENST00000537796 DNMBPQ6XZF7 1577 aa10.84□□□□□ -0.67
NECAP1-203ENST00000537796 ABCA10Q8WWZ4 1543 aa10.82□□□□□ -0.68
NECAP1-203ENST00000537796 CHIC2Q9UKJ5 165 aa10.82□□□□□ -0.68
NECAP1-203ENST00000537796 SETD5Q9C0A6 1442 aa10.81□□□□□ -0.68
NECAP1-203ENST00000537796 FHAD1B1AJZ9 1412 aa10.8□□□□□ -0.68
NECAP1-203ENST00000537796 DDX10Q13206 875 aaKnown RBP10.79□□□□□ -0.68
NECAP1-203ENST00000537796 MTUS2Q5JR59 1369 aa10.78□□□□□ -0.68
NECAP1-203ENST00000537796 AQRO60306 1485 aaKnown RBP eCLIP10.78□□□□□ -0.686e-7■■■■■ 30.6
NECAP1-203ENST00000537796 CLSPNQ9HAW4 1339 aa10.78□□□□□ -0.68
NECAP1-203ENST00000537796 MAPKBP1O60336 1514 aa10.78□□□□□ -0.68
NECAP1-203ENST00000537796 GAPVD1Q14C86 1478 aa10.78□□□□□ -0.68
NECAP1-203ENST00000537796 RRP7BPQ9NSQ0 103 aa10.77□□□□□ -0.68
NECAP1-203ENST00000537796 PTPRKQ15262 1439 aa10.75□□□□□ -0.69
NECAP1-203ENST00000537796 CASKIN1Q8WXD9 1431 aa10.74□□□□□ -0.69
NECAP1-203ENST00000537796 PDS5BQ9NTI5 1447 aa10.74□□□□□ -0.69
NECAP1-203ENST00000537796 WDR97A6NE52 1622 aa10.73□□□□□ -0.69
NECAP1-203ENST00000537796 KIF21AQ7Z4S6 1674 aa10.73□□□□□ -0.69
NECAP1-203ENST00000537796 FBLN2P98095 1184 aa10.72□□□□□ -0.69
NECAP1-203ENST00000537796 FOXD1Q16676 465 aa10.72□□□□□ -0.69
NECAP1-203ENST00000537796 FYCO1Q9BQS8 1478 aa10.71□□□□□ -0.7
NECAP1-203ENST00000537796 TRIM52Q96A61 297 aa10.7□□□□□ -0.7
NECAP1-203ENST00000537796 FGD6Q6ZV73 1430 aa10.7□□□□□ -0.7
NECAP1-203ENST00000537796 LAMC3Q9Y6N6 1575 aa10.7□□□□□ -0.7
NECAP1-203ENST00000537796 SNAPC4Q5SXM2 1469 aa10.7□□□□□ -0.7
NECAP1-203ENST00000537796 FMN1Q68DA7 1419 aa10.7□□□□□ -0.7
NECAP1-203ENST00000537796 MAP3K1Q13233 1512 aa10.69□□□□□ -0.7
NECAP1-203ENST00000537796 CFAP43Q8NDM7 1665 aa10.69□□□□□ -0.7
NECAP1-203ENST00000537796 ZNF608Q9ULD9 1512 aaPredicted RBP10.68□□□□□ -0.7
NECAP1-203ENST00000537796 CTTNBP2Q8WZ74 1663 aa10.68□□□□□ -0.7
NECAP1-203ENST00000537796 CUL7Q14999 1698 aa10.67□□□□□ -0.7
NECAP1-203ENST00000537796 NCOA2Q15596 1464 aa10.67□□□□□ -0.7
NECAP1-203ENST00000537796 PPP1R15AO75807 674 aaPredicted RBP10.67□□□□□ -0.7
NECAP1-203ENST00000537796 EFCAB5A4FU69 1503 aa10.66□□□□□ -0.7
NECAP1-203ENST00000537796 ABCA5Q8WWZ7 1642 aa10.66□□□□□ -0.7
NECAP1-203ENST00000537796 ZNF644Q9H582 1327 aaPredicted RBP10.66□□□□□ -0.7
NECAP1-203ENST00000537796 BCANQ96GW7 911 aa10.66□□□□□ -0.7
NECAP1-203ENST00000537796 LRRIQ1Q96JM4 1722 aa10.66□□□□□ -0.7
NECAP1-203ENST00000537796 CDK13Q14004 1512 aaKnown RBP10.65□□□□□ -0.7
NECAP1-203ENST00000537796 MAGI3Q5TCQ9 1506 aa10.65□□□□□ -0.7
NECAP1-203ENST00000537796 TONSLQ96HA7 1378 aa10.64□□□□□ -0.71
NECAP1-203ENST00000537796 CCDC18Q5T9S5 1454 aa10.64□□□□□ -0.71
NECAP1-203ENST00000537796 GRIN2BQ13224 1484 aa10.63□□□□□ -0.71
NECAP1-203ENST00000537796 CNGB1Q14028 1251 aaPredicted RBP10.63□□□□□ -0.71
NECAP1-203ENST00000537796 MYOM3Q5VTT5 1437 aa10.62□□□□□ -0.71
NECAP1-203ENST00000537796 ZNF777Q9ULD5 760 aaPredicted RBP10.62□□□□□ -0.71
NECAP1-203ENST00000537796 TARBP1Q13395 1621 aaKnown RBP10.62□□□□□ -0.71
NECAP1-203ENST00000537796 NAIPQ13075 1403 aa10.61□□□□□ -0.71
NECAP1-203ENST00000537796 SAMD9Q5K651 1589 aa10.6□□□□□ -0.71
NECAP1-203ENST00000537796 SUPT16HQ9Y5B9 1047 aaKnown RBP10.6□□□□□ -0.71
NECAP1-203ENST00000537796 PELP1Q8IZL8 1130 aaKnown RBP10.59□□□□□ -0.71
NECAP1-203ENST00000537796 CHMP7Q8WUX9 453 aaPredicted RBP10.58□□□□□ -0.72
NECAP1-203ENST00000537796 HFM1A2PYH4 1435 aa10.58□□□□□ -0.72
NECAP1-203ENST00000537796 MRC2Q9UBG0 1479 aa10.57□□□□□ -0.72
NECAP1-203ENST00000537796 PTPN23Q9H3S7 1636 aa10.56□□□□□ -0.72
NECAP1-203ENST00000537796 EPRSP07814 1512 aaKnown RBP10.56□□□□□ -0.72
NECAP1-203ENST00000537796 KDM6BO15054 1643 aa10.56□□□□□ -0.72
NECAP1-203ENST00000537796 THOC2Q8NI27 1593 aaKnown RBP10.56□□□□□ -0.72
NECAP1-203ENST00000537796 MPHOSPH9Q99550 1183 aa10.55□□□□□ -0.72
NECAP1-203ENST00000537796 UACAQ9BZF9 1416 aa10.55□□□□□ -0.72
NECAP1-203ENST00000537796 IQGAP2Q13576 1575 aa10.55□□□□□ -0.72
NECAP1-203ENST00000537796 PBRM1Q86U86 1689 aa10.55□□□□□ -0.72
NECAP1-203ENST00000537796 ANP32CO43423 234 aa10.55□□□□□ -0.72
NECAP1-203ENST00000537796 ERCC6Q03468 1493 aa10.54□□□□□ -0.72
NECAP1-203ENST00000537796 SENP3-EIF4A1A0A087X0R7 540 aa10.54□□□□□ -0.72
NECAP1-203ENST00000537796 L3MBTL2Q969R5 705 aa10.54□□□□□ -0.72
NECAP1-203ENST00000537796 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.54□□□□□ -0.72
NECAP1-203ENST00000537796 SUPT6HQ7KZ85 1726 aaKnown RBP10.54□□□□□ -0.72
NECAP1-203ENST00000537796 HSPA5P11021 654 aaKnown RBP10.54□□□□□ -0.72
NECAP1-203ENST00000537796 ZNF326Q5BKZ1 582 aaKnown RBP10.54□□□□□ -0.72
NECAP1-203ENST00000537796 UGGT2Q9NYU1 1516 aa10.53□□□□□ -0.72
NECAP1-203ENST00000537796 AEBP2Q6ZN18 517 aaPredicted RBP10.53□□□□□ -0.72
NECAP1-203ENST00000537796 EHBP1L1Q8N3D4 1523 aa10.53□□□□□ -0.72
NECAP1-203ENST00000537796 ADAMTS12P58397 1594 aa10.53□□□□□ -0.72
NECAP1-203ENST00000537796 POLR3GLQ9BT43 218 aa10.52□□□□□ -0.72
NECAP1-203ENST00000537796 FKBP8Q14318 412 aa10.52□□□□□ -0.73
NECAP1-203ENST00000537796 PRG4Q92954 1404 aaPredicted RBP10.52□□□□□ -0.73
NECAP1-203ENST00000537796 DENND4BO75064 1496 aaPredicted RBP10.51□□□□□ -0.73
NECAP1-203ENST00000537796 C11orf95C9JLR9 678 aaPredicted RBP10.51□□□□□ -0.73
NECAP1-203ENST00000537796 SLC4A1APQ9BWU0 796 aaKnown RBP10.51□□□□□ -0.73
NECAP1-203ENST00000537796 PLB1Q6P1J6 1458 aa10.5□□□□□ -0.73
NECAP1-203ENST00000537796 NBPF8Q3BBV2 869 aa10.49□□□□□ -0.73
NECAP1-203ENST00000537796 CCDC184Q52MB2 194 aa10.49□□□□□ -0.73
NECAP1-203ENST00000537796 CFDP1Q9UEE9 299 aaPredicted RBP10.49□□□□□ -0.73
NECAP1-203ENST00000537796 TIMELESSQ9UNS1 1208 aa10.49□□□□□ -0.73
NECAP1-203ENST00000537796 DISP1Q96F81 1524 aa10.49□□□□□ -0.73
NECAP1-203ENST00000537796 IRX6P78412 446 aaPredicted RBP10.49□□□□□ -0.73
NECAP1-203ENST00000537796 WASHC2AQ641Q2 1341 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms