RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 ARID4BQ4LE39 1312 aaPredicted RBP15.64■□□□□ 0.09
POLR1B-216ENST00000537335 MRS2Q9HD23 443 aa15.61■□□□□ 0.09
POLR1B-216ENST00000537335 PKNOX2Q96KN3 472 aa15.6■□□□□ 0.09
POLR1B-216ENST00000537335 MSNP26038 577 aaKnown RBP15.58■□□□□ 0.09
POLR1B-216ENST00000537335 PODXL2Q9NZ53 605 aa15.57■□□□□ 0.08
POLR1B-216ENST00000537335 TNNT3P45378 269 aaPredicted RBP15.56■□□□□ 0.08
POLR1B-216ENST00000537335 TMC1Q8TDI8 760 aa15.56■□□□□ 0.08
POLR1B-216ENST00000537335 SALL2Q9Y467 1007 aaPredicted RBP15.56■□□□□ 0.08
POLR1B-216ENST00000537335 SLC24A1O60721 1099 aa15.55■□□□□ 0.08
POLR1B-216ENST00000537335 TONSLQ96HA7 1378 aa15.54■□□□□ 0.08
POLR1B-216ENST00000537335 CHAF1AQ13111 956 aaPredicted RBP15.52■□□□□ 0.07
POLR1B-216ENST00000537335 A0A0U1RQG5 324 aaPredicted RBP15.46■□□□□ 0.07
POLR1B-216ENST00000537335 B4GALNT3Q6L9W6 998 aa15.45■□□□□ 0.06
POLR1B-216ENST00000537335 ARID3AQ99856 593 aa15.44■□□□□ 0.06
POLR1B-216ENST00000537335 ANO8Q9HCE9 1232 aaPredicted RBP15.43■□□□□ 0.06
POLR1B-216ENST00000537335 USP35Q9P2H5 1018 aa15.41■□□□□ 0.06
POLR1B-216ENST00000537335 TIMELESSQ9UNS1 1208 aa15.39■□□□□ 0.05
POLR1B-216ENST00000537335 IPO9Q96P70 1041 aaKnown RBP15.38■□□□□ 0.05
POLR1B-216ENST00000537335 PLCB2Q00722 1185 aa15.37■□□□□ 0.05
POLR1B-216ENST00000537335 PTMSP20962 102 aa15.35■□□□□ 0.05
POLR1B-216ENST00000537335 CCDC180Q9P1Z9 1646 aa15.35■□□□□ 0.05
POLR1B-216ENST00000537335 WDR43Q15061 677 aaKnown RBP eCLIP15.33■□□□□ 0.04
POLR1B-216ENST00000537335 GOLGA6L3A6NEY3 463 aa15.32■□□□□ 0.04
POLR1B-216ENST00000537335 NRDCO43847 1150 aa15.31■□□□□ 0.04
POLR1B-216ENST00000537335 ZRSR1Q15695 479 aaKnown RBP15.31■□□□□ 0.04
POLR1B-216ENST00000537335 RGS3P49796 1198 aa15.3■□□□□ 0.04
POLR1B-216ENST00000537335 KIAA2012Q0VF49 1180 aa15.29■□□□□ 0.04
POLR1B-216ENST00000537335 GOLGA6L6A8MZA4 724 aa15.29■□□□□ 0.04
POLR1B-216ENST00000537335 HIRIP3Q9BW71 556 aaPredicted RBP15.29■□□□□ 0.04
POLR1B-216ENST00000537335 MYH16Q9H6N6 1097 aa15.29■□□□□ 0.04
POLR1B-216ENST00000537335 HSP90AB1P08238 724 aaKnown RBP15.27■□□□□ 0.04
POLR1B-216ENST00000537335 GSE1Q14687 1217 aa15.27■□□□□ 0.04
POLR1B-216ENST00000537335 FANCIQ9NVI1 1328 aa15.27■□□□□ 0.03
POLR1B-216ENST00000537335 GZF1Q9H116 711 aaPredicted RBP15.24■□□□□ 0.03
POLR1B-216ENST00000537335 HSCBQ8IWL3 235 aa15.24■□□□□ 0.03
POLR1B-216ENST00000537335 EIF4G2P78344 907 aaKnown RBP eCLIP15.23■□□□□ 0.03
POLR1B-216ENST00000537335 TCERG1O14776 1098 aaKnown RBP15.22■□□□□ 0.03
POLR1B-216ENST00000537335 GBP4Q96PP9 640 aa15.19■□□□□ 0.02
POLR1B-216ENST00000537335 TPRNQ4KMQ1 711 aa15.19■□□□□ 0.02
POLR1B-216ENST00000537335 APPP05067 770 aa15.18■□□□□ 0.02
POLR1B-216ENST00000537335 CCER2I3L3R5 266 aa15.18■□□□□ 0.02
POLR1B-216ENST00000537335 ZBTB7CA1YPR0 619 aa15.16■□□□□ 0.02
POLR1B-216ENST00000537335 CASC1Q6TDU7 716 aa15.16■□□□□ 0.02
POLR1B-216ENST00000537335 ZNF771Q7L3S4 317 aaPredicted RBP15.15■□□□□ 0.02
POLR1B-216ENST00000537335 SLKQ9H2G2 1235 aaPredicted RBP15.15■□□□□ 0.02
POLR1B-216ENST00000537335 CALRP27797 417 aaKnown RBP15.14■□□□□ 0.01
POLR1B-216ENST00000537335 DRC7Q8IY82 874 aa15.14■□□□□ 0.01
POLR1B-216ENST00000537335 SPRYD3Q8NCJ5 442 aa15.13■□□□□ 0.01
POLR1B-216ENST00000537335 MAP7D2Q96T17 732 aa15.11■□□□□ 0.01
POLR1B-216ENST00000537335 FAM13BQ9NYF5 915 aa15.11■□□□□ 0.01
POLR1B-216ENST00000537335 UBE2Q2Q8WVN8 375 aa15.11■□□□□ 0.01
POLR1B-216ENST00000537335 SENP3-EIF4A1A0A087X0R7 540 aa15.08■□□□□ 0
POLR1B-216ENST00000537335 SETQ01105 290 aaPredicted RBP15.07■□□□□ 0
POLR1B-216ENST00000537335 MTERF4Q7Z6M4 381 aaKnown RBP15.06■□□□□ 0
POLR1B-216ENST00000537335 GOLGA6L4A6NEF3 574 aa15.06■□□□□ 0
POLR1B-216ENST00000537335 GOLGA6L1Q8N7Z2 621 aa15.05■□□□□ -0
POLR1B-216ENST00000537335 FTSJ3Q8IY81 847 aaKnown RBP15.04■□□□□ -0
POLR1B-216ENST00000537335 IL27Q8NEV9 243 aa15.04■□□□□ -0
POLR1B-216ENST00000537335 MYO15BQ96JP2 1530 aa15.04■□□□□ -0
POLR1B-216ENST00000537335 SYAP1Q96A49 352 aaPredicted RBP15.03■□□□□ -0
POLR1B-216ENST00000537335 FAM43AQ8N2R8 423 aa15.03■□□□□ -0
POLR1B-216ENST00000537335 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.02■□□□□ -0
POLR1B-216ENST00000537335 CALD1Q05682 793 aaKnown RBP15.01□□□□□ -0.01
POLR1B-216ENST00000537335 RRP9O43818 475 aaKnown RBP14.99□□□□□ -0.01
POLR1B-216ENST00000537335 TPM2P07951 284 aa14.98□□□□□ -0.01
POLR1B-216ENST00000537335 DDX11L8A8MPP1 907 aa14.98□□□□□ -0.01
POLR1B-216ENST00000537335 CSPP1Q1MSJ5 1256 aa14.98□□□□□ -0.01
POLR1B-216ENST00000537335 HTATSF1O43719 755 aaKnown RBP14.96□□□□□ -0.01
POLR1B-216ENST00000537335 MS4A1P11836 297 aa14.96□□□□□ -0.02
POLR1B-216ENST00000537335 PDE4CQ08493 712 aa14.96□□□□□ -0.02
POLR1B-216ENST00000537335 FRAT1Q92837 279 aaPredicted RBP14.95□□□□□ -0.02
POLR1B-216ENST00000537335 CCDC66A2RUB6 948 aa14.94□□□□□ -0.02
POLR1B-216ENST00000537335 CFAP44Q96MT7 982 aa14.94□□□□□ -0.02
POLR1B-216ENST00000537335 CHMP4BQ9H444 224 aaKnown RBP14.94□□□□□ -0.02
POLR1B-216ENST00000537335 BRPF3Q9ULD4 1205 aa14.93□□□□□ -0.02
POLR1B-216ENST00000537335 P3H3Q8IVL6 736 aa14.93□□□□□ -0.02
POLR1B-216ENST00000537335 TEX35Q5T0J7 233 aa14.92□□□□□ -0.02
POLR1B-216ENST00000537335 SKOR2Q2VWA4 1001 aaPredicted RBP14.91□□□□□ -0.02
POLR1B-216ENST00000537335 PDE4AP27815 886 aa14.91□□□□□ -0.02
POLR1B-216ENST00000537335 NOM1Q5C9Z4 860 aaKnown RBP14.9□□□□□ -0.02
POLR1B-216ENST00000537335 NOC3LQ8WTT2 800 aaKnown RBP14.9□□□□□ -0.02
POLR1B-216ENST00000537335 GPS2Q13227 327 aa14.89□□□□□ -0.03
POLR1B-216ENST00000537335 RCAN3Q9UKA8 241 aa14.88□□□□□ -0.03
POLR1B-216ENST00000537335 KDM2AQ9Y2K7 1162 aa14.88□□□□□ -0.03
POLR1B-216ENST00000537335 SLC4A3P48751 1232 aa14.87□□□□□ -0.03
POLR1B-216ENST00000537335 PHF14O94880 888 aa14.87□□□□□ -0.03
POLR1B-216ENST00000537335 MCCP23508 829 aa14.87□□□□□ -0.03
POLR1B-216ENST00000537335 NFKBIBQ15653 356 aa14.84□□□□□ -0.03
POLR1B-216ENST00000537335 ZNF777Q9ULD5 760 aaPredicted RBP14.84□□□□□ -0.03
POLR1B-216ENST00000537335 ZMYND15Q9H091 742 aa14.84□□□□□ -0.03
POLR1B-216ENST00000537335 R3HCC1Q9Y3T6 440 aaKnown RBP14.84□□□□□ -0.03
POLR1B-216ENST00000537335 DDX49Q9Y6V7 483 aaKnown RBP14.84□□□□□ -0.03
POLR1B-216ENST00000537335 CHIC2Q9UKJ5 165 aa14.84□□□□□ -0.03
POLR1B-216ENST00000537335 NUDCQ9Y266 331 aa14.83□□□□□ -0.03
POLR1B-216ENST00000537335 MRE11P49959 708 aa14.82□□□□□ -0.04
POLR1B-216ENST00000537335 CFAP53Q96M91 514 aa14.82□□□□□ -0.04
POLR1B-216ENST00000537335 KNSTRNQ9Y448 316 aa14.81□□□□□ -0.04
POLR1B-216ENST00000537335 FGD1P98174 961 aa14.81□□□□□ -0.04
POLR1B-216ENST00000537335 FAM161AQ3B820 660 aa14.8□□□□□ -0.04
POLR1B-216ENST00000537335 TAF3Q5VWG9 929 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms