RNA–Protein interactions for RNA: ENST00000536256.3

ABCC4-206, Transcript of ATP binding cassette subfamily C member 4, humanhuman

TSL 2 BASIC

Gene ABCC4, Length 2,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4-206ENST00000536256 LRRC9Q6ZRR7 1453 aa19.39■□□□□ 0.69
ABCC4-206ENST00000536256 MAP3K1Q13233 1512 aa19.38■□□□□ 0.69
ABCC4-206ENST00000536256 RAB3GAP2Q9H2M9 1393 aa19.38■□□□□ 0.69
ABCC4-206ENST00000536256 DNMBPQ6XZF7 1577 aa19.37■□□□□ 0.69
ABCC4-206ENST00000536256 FHAD1B1AJZ9 1412 aa19.37■□□□□ 0.69
ABCC4-206ENST00000536256 POLA1P09884 1462 aaPredicted RBP19.37■□□□□ 0.69
ABCC4-206ENST00000536256 TOPBP1Q92547 1522 aa19.36■□□□□ 0.69
ABCC4-206ENST00000536256 PHLDB1Q86UU1 1377 aa19.36■□□□□ 0.69
ABCC4-206ENST00000536256 FAM50AQ14320 339 aaKnown RBP19.36■□□□□ 0.69
ABCC4-206ENST00000536256 ABCA10Q8WWZ4 1543 aa19.34■□□□□ 0.69
ABCC4-206ENST00000536256 FHOD3Q2V2M9 1422 aa19.33■□□□□ 0.69
ABCC4-206ENST00000536256 PCF11O94913 1555 aaKnown RBP19.32■□□□□ 0.68
ABCC4-206ENST00000536256 SETD5Q9C0A6 1442 aa19.29■□□□□ 0.68
ABCC4-206ENST00000536256 CFAP43Q8NDM7 1665 aa19.25■□□□□ 0.67
ABCC4-206ENST00000536256 MAPKBP1O60336 1514 aa19.25■□□□□ 0.67
ABCC4-206ENST00000536256 CUL7Q14999 1698 aa19.22■□□□□ 0.67
ABCC4-206ENST00000536256 TDRD9Q8NDG6 1382 aaKnown RBP19.22■□□□□ 0.67
ABCC4-206ENST00000536256 URB2Q14146 1524 aaKnown RBP19.21■□□□□ 0.67
ABCC4-206ENST00000536256 FYCO1Q9BQS8 1478 aa19.21■□□□□ 0.67
ABCC4-206ENST00000536256 EFCAB5A4FU69 1503 aa19.21■□□□□ 0.67
ABCC4-206ENST00000536256 CASKIN1Q8WXD9 1431 aa19.21■□□□□ 0.67
ABCC4-206ENST00000536256 SIN3AQ96ST3 1273 aa19.2■□□□□ 0.66
ABCC4-206ENST00000536256 CTTNBP2Q8WZ74 1663 aa19.19■□□□□ 0.66
ABCC4-206ENST00000536256 DNAJC5BQ9UF47 199 aa19.17■□□□□ 0.66
ABCC4-206ENST00000536256 LAMC3Q9Y6N6 1575 aa19.17■□□□□ 0.66
ABCC4-206ENST00000536256 AQRO60306 1485 aaKnown RBP eCLIP19.15■□□□□ 0.661e-6■■■■■ 29.5
ABCC4-206ENST00000536256 FMN1Q68DA7 1419 aa19.15■□□□□ 0.66
ABCC4-206ENST00000536256 WDR97A6NE52 1622 aa19.12■□□□□ 0.65
ABCC4-206ENST00000536256 GAPVD1Q14C86 1478 aa19.12■□□□□ 0.65
ABCC4-206ENST00000536256 MTUS2Q5JR59 1369 aa19.1■□□□□ 0.65
ABCC4-206ENST00000536256 SNAPC4Q5SXM2 1469 aa19.09■□□□□ 0.65
ABCC4-206ENST00000536256 PDS5BQ9NTI5 1447 aa19.09■□□□□ 0.65
ABCC4-206ENST00000536256 ABCA5Q8WWZ7 1642 aa19.08■□□□□ 0.65
ABCC4-206ENST00000536256 FGD6Q6ZV73 1430 aa19.08■□□□□ 0.64
ABCC4-206ENST00000536256 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.08■□□□□ 0.64
ABCC4-206ENST00000536256 SAMD9Q5K651 1589 aa19.03■□□□□ 0.64
ABCC4-206ENST00000536256 KCNH8Q96L42 1107 aa19.02■□□□□ 0.64
ABCC4-206ENST00000536256 DDX10Q13206 875 aaKnown RBP19.02■□□□□ 0.64
ABCC4-206ENST00000536256 KIF21AQ7Z4S6 1674 aa19.01■□□□□ 0.63
ABCC4-206ENST00000536256 HIRIP3Q9BW71 556 aaPredicted RBP19.01■□□□□ 0.63
ABCC4-206ENST00000536256 TIMELESSQ9UNS1 1208 aa19.01■□□□□ 0.63
ABCC4-206ENST00000536256 LRRIQ1Q96JM4 1722 aa19■□□□□ 0.63
ABCC4-206ENST00000536256 PTPRKQ15262 1439 aa19■□□□□ 0.63
ABCC4-206ENST00000536256 PPP1R15AO75807 674 aaPredicted RBP18.99■□□□□ 0.63
ABCC4-206ENST00000536256 NCOA2Q15596 1464 aa18.98■□□□□ 0.63
ABCC4-206ENST00000536256 GRIN2BQ13224 1484 aa18.98■□□□□ 0.63
ABCC4-206ENST00000536256 CCDC18Q5T9S5 1454 aa18.96■□□□□ 0.63
ABCC4-206ENST00000536256 MYOM3Q5VTT5 1437 aa18.96■□□□□ 0.62
ABCC4-206ENST00000536256 TARBP1Q13395 1621 aaKnown RBP18.94■□□□□ 0.62
ABCC4-206ENST00000536256 HFM1A2PYH4 1435 aa18.94■□□□□ 0.62
ABCC4-206ENST00000536256 TONSLQ96HA7 1378 aa18.92■□□□□ 0.62
ABCC4-206ENST00000536256 SUPT6HQ7KZ85 1726 aaKnown RBP18.91■□□□□ 0.62
ABCC4-206ENST00000536256 UACAQ9BZF9 1416 aa18.91■□□□□ 0.62
ABCC4-206ENST00000536256 PTPN23Q9H3S7 1636 aa18.9■□□□□ 0.62
ABCC4-206ENST00000536256 SUPT16HQ9Y5B9 1047 aaKnown RBP18.9■□□□□ 0.62
ABCC4-206ENST00000536256 NAIPQ13075 1403 aa18.9■□□□□ 0.62
ABCC4-206ENST00000536256 EHBP1L1Q8N3D4 1523 aa18.89■□□□□ 0.61
ABCC4-206ENST00000536256 THOC2Q8NI27 1593 aaKnown RBP18.89■□□□□ 0.61
ABCC4-206ENST00000536256 ARID3CA6NKF2 412 aa18.89■□□□□ 0.61
ABCC4-206ENST00000536256 CHIC2Q9UKJ5 165 aa18.89■□□□□ 0.61
ABCC4-206ENST00000536256 MAGI3Q5TCQ9 1506 aa18.88■□□□□ 0.61
ABCC4-206ENST00000536256 RRP7BPQ9NSQ0 103 aa18.87■□□□□ 0.61
ABCC4-206ENST00000536256 UGGT2Q9NYU1 1516 aa18.85■□□□□ 0.61
ABCC4-206ENST00000536256 PBRM1Q86U86 1689 aa18.85■□□□□ 0.61
ABCC4-206ENST00000536256 IQGAP2Q13576 1575 aa18.82■□□□□ 0.6
ABCC4-206ENST00000536256 ARHGEF11O15085 1522 aa18.81■□□□□ 0.6
ABCC4-206ENST00000536256 EPRSP07814 1512 aaKnown RBP18.8■□□□□ 0.6
ABCC4-206ENST00000536256 TRIM52Q96A61 297 aa18.79■□□□□ 0.6
ABCC4-206ENST00000536256 HECW1Q76N89 1606 aa18.79■□□□□ 0.6
ABCC4-206ENST00000536256 CDK13Q14004 1512 aaKnown RBP18.79■□□□□ 0.6
ABCC4-206ENST00000536256 ADAMTS12P58397 1594 aa18.79■□□□□ 0.6
ABCC4-206ENST00000536256 ANP32CO43423 234 aa18.78■□□□□ 0.6
ABCC4-206ENST00000536256 MRC2Q9UBG0 1479 aa18.77■□□□□ 0.6
ABCC4-206ENST00000536256 ZNF608Q9ULD9 1512 aaPredicted RBP18.75■□□□□ 0.59
ABCC4-206ENST00000536256 TCOF1Q13428 1488 aaKnown RBP18.75■□□□□ 0.59
ABCC4-206ENST00000536256 CCER2I3L3R5 266 aa18.72■□□□□ 0.59
ABCC4-206ENST00000536256 WDR62O43379 1518 aa18.71■□□□□ 0.59
ABCC4-206ENST00000536256 KDM6BO15054 1643 aa18.7■□□□□ 0.58
ABCC4-206ENST00000536256 KDM5BQ9UGL1 1544 aa18.69■□□□□ 0.58
ABCC4-206ENST00000536256 MIA2Q96PC5 1412 aa18.69■□□□□ 0.58
ABCC4-206ENST00000536256 DENND4BO75064 1496 aaPredicted RBP18.69■□□□□ 0.58
ABCC4-206ENST00000536256 MPHOSPH9Q99550 1183 aa18.69■□□□□ 0.58
ABCC4-206ENST00000536256 FOXD1Q16676 465 aa18.68■□□□□ 0.58
ABCC4-206ENST00000536256 GCC2Q8IWJ2 1684 aa18.68■□□□□ 0.58
ABCC4-206ENST00000536256 IFT140Q96RY7 1462 aa18.67■□□□□ 0.58
ABCC4-206ENST00000536256 BCANQ96GW7 911 aa18.65■□□□□ 0.58
ABCC4-206ENST00000536256 AKNAQ7Z591 1439 aa18.65■□□□□ 0.58
ABCC4-206ENST00000536256 ZNF644Q9H582 1327 aaPredicted RBP18.64■□□□□ 0.58
ABCC4-206ENST00000536256 KIAA0586Q9BVV6 1533 aa18.64■□□□□ 0.57
ABCC4-206ENST00000536256 FKBP8Q14318 412 aa18.64■□□□□ 0.57
ABCC4-206ENST00000536256 HSPA5P11021 654 aaKnown RBP18.64■□□□□ 0.57
ABCC4-206ENST00000536256 DISP1Q96F81 1524 aa18.63■□□□□ 0.57
ABCC4-206ENST00000536256 L3MBTL2Q969R5 705 aa18.61■□□□□ 0.57
ABCC4-206ENST00000536256 KIAA0556O60303 1618 aa18.61■□□□□ 0.57
ABCC4-206ENST00000536256 NUP153P49790 1475 aaKnown RBP18.6■□□□□ 0.57
ABCC4-206ENST00000536256 DAPK1P53355 1430 aa18.6■□□□□ 0.57
ABCC4-206ENST00000536256 WASHC2AQ641Q2 1341 aa18.59■□□□□ 0.57
ABCC4-206ENST00000536256 CDK11AQ9UQ88 783 aaPredicted RBP18.59■□□□□ 0.57
ABCC4-206ENST00000536256 EIF4G2P78344 907 aaKnown RBP eCLIP18.58■□□□□ 0.575e-9■□□□□ 11
ABCC4-206ENST00000536256 GRIN2AQ12879 1464 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms