RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 KIF27Q86VH2 1401 aa22.15■■□□□ 1.14
MCF2L-232ENST00000535094 CHIC2Q9UKJ5 165 aa22.13■■□□□ 1.13
MCF2L-232ENST00000535094 ARAP1Q96P48 1450 aa22.12■■□□□ 1.13
MCF2L-232ENST00000535094 SETD5Q9C0A6 1442 aa22.08■■□□□ 1.13
MCF2L-232ENST00000535094 ATAD2BQ9ULI0 1458 aa22.08■■□□□ 1.13
MCF2L-232ENST00000535094 PPP1R15AO75807 674 aaPredicted RBP22.03■■□□□ 1.12
MCF2L-232ENST00000535094 RRP7BPQ9NSQ0 103 aa22.02■■□□□ 1.12
MCF2L-232ENST00000535094 ZNF326Q5BKZ1 582 aaKnown RBP22■■□□□ 1.11
MCF2L-232ENST00000535094 NBR1Q14596 966 aa21.97■■□□□ 1.11
MCF2L-232ENST00000535094 CUX2O14529 1486 aa21.96■■□□□ 1.11
MCF2L-232ENST00000535094 B4GALNT3Q6L9W6 998 aa21.95■■□□□ 1.1
MCF2L-232ENST00000535094 RRBP1Q9P2E9 1410 aaKnown RBP21.95■■□□□ 1.1
MCF2L-232ENST00000535094 CCER2I3L3R5 266 aa21.94■■□□□ 1.1
MCF2L-232ENST00000535094 MRS2Q9HD23 443 aa21.93■■□□□ 1.1
MCF2L-232ENST00000535094 CARMIL1Q5VZK9 1371 aa21.92■■□□□ 1.1
MCF2L-232ENST00000535094 PHLDB1Q86UU1 1377 aa21.92■■□□□ 1.1
MCF2L-232ENST00000535094 MTUS2Q5JR59 1369 aa21.9■■□□□ 1.1
MCF2L-232ENST00000535094 WDR97A6NE52 1622 aa21.89■■□□□ 1.09
MCF2L-232ENST00000535094 PRXQ9BXM0 1461 aa21.88■■□□□ 1.09
MCF2L-232ENST00000535094 ARHGAP35Q9NRY4 1499 aa21.88■■□□□ 1.09
MCF2L-232ENST00000535094 FOXD1Q16676 465 aa21.86■■□□□ 1.09
MCF2L-232ENST00000535094 HSPA5P11021 654 aaKnown RBP21.82■■□□□ 1.08
MCF2L-232ENST00000535094 EIF4G2P78344 907 aaKnown RBP eCLIP21.82■■□□□ 1.08
MCF2L-232ENST00000535094 FHOD3Q2V2M9 1422 aa21.8■■□□□ 1.08
MCF2L-232ENST00000535094 SALL2Q9Y467 1007 aaPredicted RBP21.8■■□□□ 1.08
MCF2L-232ENST00000535094 MSH5O43196 834 aa21.79■■□□□ 1.08
MCF2L-232ENST00000535094 NPM2Q86SE8 214 aaKnown RBP21.78■■□□□ 1.08
MCF2L-232ENST00000535094 TIMELESSQ9UNS1 1208 aa21.78■■□□□ 1.08
MCF2L-232ENST00000535094 IGF1RP08069 1367 aa21.77■■□□□ 1.07
MCF2L-232ENST00000535094 TOP2BQ02880 1626 aa21.76■■□□□ 1.07
MCF2L-232ENST00000535094 UNC13AQ9UPW8 1703 aa21.76■■□□□ 1.07
MCF2L-232ENST00000535094 PPP4R2Q9NY27 417 aa21.74■■□□□ 1.07
MCF2L-232ENST00000535094 RTL5Q5HYW3 569 aaPredicted RBP21.74■■□□□ 1.07
MCF2L-232ENST00000535094 ERICH3Q5RHP9 1530 aa21.73■■□□□ 1.07
MCF2L-232ENST00000535094 FHAD1B1AJZ9 1412 aa21.72■■□□□ 1.07
MCF2L-232ENST00000535094 CCDC136Q96JN2 1154 aa21.72■■□□□ 1.07
MCF2L-232ENST00000535094 CCDC184Q52MB2 194 aa21.71■■□□□ 1.07
MCF2L-232ENST00000535094 BICRAQ9NZM4 1560 aa21.71■■□□□ 1.07
MCF2L-232ENST00000535094 MAPKBP1O60336 1514 aa21.7■■□□□ 1.06
MCF2L-232ENST00000535094 LRRC9Q6ZRR7 1453 aa21.7■■□□□ 1.06
MCF2L-232ENST00000535094 CUX1P39880 1505 aa21.69■■□□□ 1.06
MCF2L-232ENST00000535094 ANP32AP39687 249 aaKnown RBP21.65■■□□□ 1.06
MCF2L-232ENST00000535094 DEKP35659 375 aaKnown RBP21.64■■□□□ 1.05
MCF2L-232ENST00000535094 ZNF777Q9ULD5 760 aaPredicted RBP21.63■■□□□ 1.05
MCF2L-232ENST00000535094 L3MBTL2Q969R5 705 aa21.62■■□□□ 1.05
MCF2L-232ENST00000535094 WASHC2AQ641Q2 1341 aa21.61■■□□□ 1.05
MCF2L-232ENST00000535094 SLC4A1APQ9BWU0 796 aaKnown RBP21.59■■□□□ 1.05
MCF2L-232ENST00000535094 CCDC18Q5T9S5 1454 aa21.57■■□□□ 1.04
MCF2L-232ENST00000535094 TIAM1Q13009 1591 aa21.56■■□□□ 1.04
MCF2L-232ENST00000535094 TMC1Q8TDI8 760 aa21.56■■□□□ 1.04
MCF2L-232ENST00000535094 NOP58Q9Y2X3 529 aaKnown RBP21.56■■□□□ 1.04
MCF2L-232ENST00000535094 ZBTB47Q9UFB7 747 aaPredicted RBP21.55■■□□□ 1.04
MCF2L-232ENST00000535094 KDM2AQ9Y2K7 1162 aa21.53■■□□□ 1.04
MCF2L-232ENST00000535094 FANCIQ9NVI1 1328 aa21.53■■□□□ 1.04
MCF2L-232ENST00000535094 PRKRIP1Q9H875 184 aaPredicted RBP21.53■■□□□ 1.04
MCF2L-232ENST00000535094 MPHOSPH9Q99550 1183 aa21.52■■□□□ 1.04
MCF2L-232ENST00000535094 PEG3Q9GZU2 1588 aa21.51■■□□□ 1.03
MCF2L-232ENST00000535094 FGD5Q6ZNL6 1462 aa21.49■■□□□ 1.03
MCF2L-232ENST00000535094 TDRD9Q8NDG6 1382 aaKnown RBP21.48■■□□□ 1.03
MCF2L-232ENST00000535094 FGD6Q6ZV73 1430 aa21.47■■□□□ 1.03
MCF2L-232ENST00000535094 RTN4Q9NQC3 1192 aaKnown RBP21.47■■□□□ 1.03
MCF2L-232ENST00000535094 C11orf95C9JLR9 678 aaPredicted RBP21.47■■□□□ 1.03
MCF2L-232ENST00000535094 RAD54L2Q9Y4B4 1467 aa21.45■■□□□ 1.02
MCF2L-232ENST00000535094 PAK3O75914 559 aaPredicted RBP21.44■■□□□ 1.02
MCF2L-232ENST00000535094 LAS1LQ9Y4W2 734 aaKnown RBP21.44■■□□□ 1.02
MCF2L-232ENST00000535094 FBLN2P98095 1184 aa21.44■■□□□ 1.02
MCF2L-232ENST00000535094 CADPSQ9ULU8 1353 aa21.43■■□□□ 1.02
MCF2L-232ENST00000535094 FMN1Q68DA7 1419 aa21.43■■□□□ 1.02
MCF2L-232ENST00000535094 UACAQ9BZF9 1416 aa21.41■■□□□ 1.02
MCF2L-232ENST00000535094 DAXXQ9UER7 740 aaPredicted RBP21.41■■□□□ 1.02
MCF2L-232ENST00000535094 CFTRP13569 1480 aa21.4■■□□□ 1.02
MCF2L-232ENST00000535094 BIVM-ERCC5R4GMW8 1640 aa21.4■■□□□ 1.02
MCF2L-232ENST00000535094 NCAPD3P42695 1498 aa21.37■■□□□ 1.01
MCF2L-232ENST00000535094 MYT1LQ9UL68 1186 aa21.36■■□□□ 1.01
MCF2L-232ENST00000535094 PCF11O94913 1555 aaKnown RBP21.36■■□□□ 1.01
MCF2L-232ENST00000535094 ERICH6BQ5W0A0 696 aa21.35■■□□□ 1.01
MCF2L-232ENST00000535094 NBPF8Q3BBV2 869 aa21.35■■□□□ 1.01
MCF2L-232ENST00000535094 ZBED9Q6R2W3 1325 aa21.35■■□□□ 1.01
MCF2L-232ENST00000535094 PTPRKQ15262 1439 aa21.34■■□□□ 1.01
MCF2L-232ENST00000535094 KIF7Q2M1P5 1343 aa21.32■■□□□ 1
MCF2L-232ENST00000535094 CCDC7Q96M83 1385 aa21.32■■□□□ 1
MCF2L-232ENST00000535094 AKNAQ7Z591 1439 aa21.31■■□□□ 1
MCF2L-232ENST00000535094 AQRO60306 1485 aaKnown RBP eCLIP21.3■■□□□ 12e-6■■□□□ 12.9
MCF2L-232ENST00000535094 NAIPQ13075 1403 aa21.29■■□□□ 1
MCF2L-232ENST00000535094 CASKIN1Q8WXD9 1431 aa21.29■■□□□ 1
MCF2L-232ENST00000535094 NUDCQ9Y266 331 aa21.29■■□□□ 1
MCF2L-232ENST00000535094 CARD11Q9BXL7 1154 aa21.29■■□□□ 1
MCF2L-232ENST00000535094 ZNF644Q9H582 1327 aaPredicted RBP21.28■■□□□ 1
MCF2L-232ENST00000535094 CNTLNQ9NXG0 1405 aa21.28■■□□□ 1
MCF2L-232ENST00000535094 HFM1A2PYH4 1435 aa21.27■■□□□ 1
MCF2L-232ENST00000535094 NCOA2Q15596 1464 aa21.27■□□□□ 0.99
MCF2L-232ENST00000535094 IPO9Q96P70 1041 aaKnown RBP21.26■□□□□ 0.99
MCF2L-232ENST00000535094 MYOM3Q5VTT5 1437 aa21.26■□□□□ 0.99
MCF2L-232ENST00000535094 NEFMP07197 916 aa21.25■□□□□ 0.99
MCF2L-232ENST00000535094 RGL3Q3MIN7 710 aa21.25■□□□□ 0.99
MCF2L-232ENST00000535094 FANCD2Q9BXW9 1451 aa21.23■□□□□ 0.99
MCF2L-232ENST00000535094 FYCO1Q9BQS8 1478 aa21.22■□□□□ 0.99
MCF2L-232ENST00000535094 PKD2Q13563 968 aa21.22■□□□□ 0.99
MCF2L-232ENST00000535094 CFDP1Q9UEE9 299 aaPredicted RBP21.22■□□□□ 0.99
MCF2L-232ENST00000535094 EXOC6Q8TAG9 804 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms