RNA–Protein interactions for RNA: ENST00000534947.5

COPS7A-204, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-204ENST00000534947 CTTNBP2Q8WZ74 1663 aa27.82■■■□□ 2.04
COPS7A-204ENST00000534947 LRRC9Q6ZRR7 1453 aa27.8■■■□□ 2.04
COPS7A-204ENST00000534947 URB2Q14146 1524 aaKnown RBP27.78■■■□□ 2.04
COPS7A-204ENST00000534947 AQRO60306 1485 aaKnown RBP eCLIP27.77■■■□□ 2.04
COPS7A-204ENST00000534947 PDS5BQ9NTI5 1447 aa27.76■■■□□ 2.03
COPS7A-204ENST00000534947 PCF11O94913 1555 aaKnown RBP27.75■■■□□ 2.03
COPS7A-204ENST00000534947 ABCA5Q8WWZ7 1642 aa27.74■■■□□ 2.03
COPS7A-204ENST00000534947 FYCO1Q9BQS8 1478 aa27.74■■■□□ 2.03
COPS7A-204ENST00000534947 SCAF1Q9H7N4 1312 aaKnown RBP27.68■■■□□ 2.02
COPS7A-204ENST00000534947 CASKIN1Q8WXD9 1431 aa27.68■■■□□ 2.02
COPS7A-204ENST00000534947 ACIN1Q9UKV3 1341 aaKnown RBP27.67■■■□□ 2.02
COPS7A-204ENST00000534947 CENPBP07199 599 aaPredicted RBP27.66■■■□□ 2.02
COPS7A-204ENST00000534947 FMN1Q68DA7 1419 aa27.62■■■□□ 2.01
COPS7A-204ENST00000534947 GAPVD1Q14C86 1478 aa27.6■■■□□ 2.01
COPS7A-204ENST00000534947 FHOD3Q2V2M9 1422 aa27.6■■■□□ 2.01
COPS7A-204ENST00000534947 KIF21AQ7Z4S6 1674 aa27.59■■■□□ 2.01
COPS7A-204ENST00000534947 SAMD9Q5K651 1589 aa27.58■■■□□ 2.01
COPS7A-204ENST00000534947 PHLDB1Q86UU1 1377 aa27.57■■■□□ 2
COPS7A-204ENST00000534947 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.57■■■□□ 2
COPS7A-204ENST00000534947 TARBP1Q13395 1621 aaKnown RBP27.53■■■□□ 2
COPS7A-204ENST00000534947 RAB3GAP2Q9H2M9 1393 aa27.52■■■□□ 2
COPS7A-204ENST00000534947 SETD5Q9C0A6 1442 aa27.52■■■□□ 2
COPS7A-204ENST00000534947 SNAPC4Q5SXM2 1469 aa27.51■■□□□ 1.99
COPS7A-204ENST00000534947 NEUROD1Q13562 356 aa27.51■■□□□ 1.99
COPS7A-204ENST00000534947 THOC2Q8NI27 1593 aaKnown RBP27.5■■□□□ 1.99
COPS7A-204ENST00000534947 TDRD9Q8NDG6 1382 aaKnown RBP27.49■■□□□ 1.99
COPS7A-204ENST00000534947 P3H3Q8IVL6 736 aa27.47■■□□□ 1.99
COPS7A-204ENST00000534947 MAPKBP1O60336 1514 aa27.43■■□□□ 1.98
COPS7A-204ENST00000534947 ITGAEP38570 1179 aa27.41■■□□□ 1.98
COPS7A-204ENST00000534947 PBRM1Q86U86 1689 aa27.4■■□□□ 1.98
COPS7A-204ENST00000534947 GRIN2BQ13224 1484 aa27.38■■□□□ 1.97
COPS7A-204ENST00000534947 MIER1Q8N108 512 aa27.37■■□□□ 1.97
COPS7A-204ENST00000534947 FAM50AQ14320 339 aaKnown RBP27.34■■□□□ 1.97
COPS7A-204ENST00000534947 ATP1B4Q9UN42 357 aaPredicted RBP27.34■■□□□ 1.97
COPS7A-204ENST00000534947 MRC2Q9UBG0 1479 aa27.34■■□□□ 1.97
COPS7A-204ENST00000534947 FGD6Q6ZV73 1430 aa27.33■■□□□ 1.97
COPS7A-204ENST00000534947 LRRIQ1Q96JM4 1722 aa27.33■■□□□ 1.97
COPS7A-204ENST00000534947 DNAJC5BQ9UF47 199 aa27.31■■□□□ 1.96
COPS7A-204ENST00000534947 EHBP1L1Q8N3D4 1523 aa27.3■■□□□ 1.96
COPS7A-204ENST00000534947 ADAMTS12P58397 1594 aa27.3■■□□□ 1.96
COPS7A-204ENST00000534947 MTUS2Q5JR59 1369 aa27.29■■□□□ 1.96
COPS7A-204ENST00000534947 CCDC18Q5T9S5 1454 aa27.27■■□□□ 1.96
COPS7A-204ENST00000534947 SUPT6HQ7KZ85 1726 aaKnown RBP27.27■■□□□ 1.96
COPS7A-204ENST00000534947 TIMELESSQ9UNS1 1208 aa27.27■■□□□ 1.96
COPS7A-204ENST00000534947 IQGAP2Q13576 1575 aa27.25■■□□□ 1.95
COPS7A-204ENST00000534947 MYOM3Q5VTT5 1437 aa27.22■■□□□ 1.95
COPS7A-204ENST00000534947 NCOA2Q15596 1464 aa27.21■■□□□ 1.95
COPS7A-204ENST00000534947 PELP1Q8IZL8 1130 aaKnown RBP27.21■■□□□ 1.95
COPS7A-204ENST00000534947 GTF3C3Q9Y5Q9 886 aa27.21■■□□□ 1.95
COPS7A-204ENST00000534947 HECW1Q76N89 1606 aa27.21■■□□□ 1.95
COPS7A-204ENST00000534947 ARHGEF11O15085 1522 aa27.2■■□□□ 1.94
COPS7A-204ENST00000534947 IFT140Q96RY7 1462 aa27.18■■□□□ 1.94
COPS7A-204ENST00000534947 UGGT2Q9NYU1 1516 aa27.17■■□□□ 1.94
COPS7A-204ENST00000534947 WDR62O43379 1518 aa27.17■■□□□ 1.94
COPS7A-204ENST00000534947 HFM1A2PYH4 1435 aa27.16■■□□□ 1.94
COPS7A-204ENST00000534947 PTPN23Q9H3S7 1636 aa27.11■■□□□ 1.93
COPS7A-204ENST00000534947 TCOF1Q13428 1488 aaKnown RBP27.08■■□□□ 1.93
COPS7A-204ENST00000534947 UACAQ9BZF9 1416 aa27.07■■□□□ 1.92
COPS7A-204ENST00000534947 YTHDC1Q96MU7 727 aaKnown RBP27.07■■□□□ 1.92
COPS7A-204ENST00000534947 MAGI3Q5TCQ9 1506 aa27.06■■□□□ 1.92
COPS7A-204ENST00000534947 EPRSP07814 1512 aaKnown RBP27.05■■□□□ 1.92
COPS7A-204ENST00000534947 PTPRKQ15262 1439 aa27.05■■□□□ 1.92
COPS7A-204ENST00000534947 NAIPQ13075 1403 aa27.02■■□□□ 1.92
COPS7A-204ENST00000534947 KIAA0586Q9BVV6 1533 aa27.01■■□□□ 1.91
COPS7A-204ENST00000534947 AKNAQ7Z591 1439 aa27.01■■□□□ 1.91
COPS7A-204ENST00000534947 MIA2Q96PC5 1412 aa27■■□□□ 1.91
COPS7A-204ENST00000534947 SIN3AQ96ST3 1273 aa26.98■■□□□ 1.91
COPS7A-204ENST00000534947 GCC2Q8IWJ2 1684 aa26.98■■□□□ 1.91
COPS7A-204ENST00000534947 ZNF608Q9ULD9 1512 aaPredicted RBP26.97■■□□□ 1.91
COPS7A-204ENST00000534947 KIAA0556O60303 1618 aa26.95■■□□□ 1.91
COPS7A-204ENST00000534947 EIF4G3O43432 1585 aaKnown RBP26.93■■□□□ 1.9
COPS7A-204ENST00000534947 PPP1R15AO75807 674 aaPredicted RBP26.93■■□□□ 1.9
COPS7A-204ENST00000534947 GRIN2AQ12879 1464 aa26.91■■□□□ 1.9
COPS7A-204ENST00000534947 DISP1Q96F81 1524 aa26.89■■□□□ 1.9
COPS7A-204ENST00000534947 CDK13Q14004 1512 aaKnown RBP26.89■■□□□ 1.9
COPS7A-204ENST00000534947 MAGI1Q96QZ7 1491 aaPredicted RBP26.88■■□□□ 1.89
COPS7A-204ENST00000534947 TONSLQ96HA7 1378 aa26.84■■□□□ 1.89
COPS7A-204ENST00000534947 RAPGEF6Q8TEU7 1601 aa26.84■■□□□ 1.89
COPS7A-204ENST00000534947 NUP153P49790 1475 aaKnown RBP26.78■■□□□ 1.88
COPS7A-204ENST00000534947 ERCC6Q03468 1493 aa26.77■■□□□ 1.88
COPS7A-204ENST00000534947 SYNJ2O15056 1496 aa26.77■■□□□ 1.88
COPS7A-204ENST00000534947 ROCK1Q13464 1354 aa26.75■■□□□ 1.87
COPS7A-204ENST00000534947 DNMT1P26358 1616 aaKnown RBP26.74■■□□□ 1.87
COPS7A-204ENST00000534947 CDK11AQ9UQ88 783 aaPredicted RBP26.72■■□□□ 1.87
COPS7A-204ENST00000534947 KDM5BQ9UGL1 1544 aa26.71■■□□□ 1.87
COPS7A-204ENST00000534947 CEP170Q5SW79 1584 aa26.7■■□□□ 1.86
COPS7A-204ENST00000534947 DAPK1P53355 1430 aa26.67■■□□□ 1.86
COPS7A-204ENST00000534947 DENND4BO75064 1496 aaPredicted RBP26.67■■□□□ 1.86
COPS7A-204ENST00000534947 RRP7BPQ9NSQ0 103 aa26.66■■□□□ 1.86
COPS7A-204ENST00000534947 NUP160Q12769 1436 aa26.66■■□□□ 1.86
COPS7A-204ENST00000534947 ADCY10Q96PN6 1610 aa26.66■■□□□ 1.86
COPS7A-204ENST00000534947 KDM6BO15054 1643 aa26.65■■□□□ 1.86
COPS7A-204ENST00000534947 ITSN2Q9NZM3 1697 aa26.65■■□□□ 1.86
COPS7A-204ENST00000534947 DDX10Q13206 875 aaKnown RBP26.65■■□□□ 1.86
COPS7A-204ENST00000534947 TROQ12816 1431 aaPredicted RBP26.64■■□□□ 1.86
COPS7A-204ENST00000534947 CARMIL2Q6F5E8 1435 aa26.62■■□□□ 1.85
COPS7A-204ENST00000534947 CHIC2Q9UKJ5 165 aa26.61■■□□□ 1.85
COPS7A-204ENST00000534947 ABCC5O15440 1437 aa26.61■■□□□ 1.85
COPS7A-204ENST00000534947 CHMP7Q8WUX9 453 aaPredicted RBP26.6■■□□□ 1.85
COPS7A-204ENST00000534947 CCER2I3L3R5 266 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms