RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 SCAF1Q9H7N4 1312 aaKnown RBP11.12□□□□□ -0.63
CTNND1-230ENST00000532245 FANCD2Q9BXW9 1451 aa11.11□□□□□ -0.63
CTNND1-230ENST00000532245 C14orf37Q86TY3 774 aa11.11□□□□□ -0.63
CTNND1-230ENST00000532245 PLEKHG5O94827 1062 aa11.11□□□□□ -0.63
CTNND1-230ENST00000532245 TONSLQ96HA7 1378 aa11.1□□□□□ -0.63
CTNND1-230ENST00000532245 CYB5RLQ6IPT4 315 aa11.09□□□□□ -0.63
CTNND1-230ENST00000532245 CARMIL2Q6F5E8 1435 aa11.09□□□□□ -0.63
CTNND1-230ENST00000532245 OSCARQ8IYS5 282 aa11.08□□□□□ -0.64
CTNND1-230ENST00000532245 NEFMP07197 916 aa11.07□□□□□ -0.64
CTNND1-230ENST00000532245 DIEXFQ68CQ4 756 aaKnown RBP11.07□□□□□ -0.64
CTNND1-230ENST00000532245 ANP32CO43423 234 aa11.06□□□□□ -0.64
CTNND1-230ENST00000532245 ERICH6Q7L0X2 663 aa11.06□□□□□ -0.64
CTNND1-230ENST00000532245 TNIKQ9UKE5 1360 aa11.05□□□□□ -0.64
CTNND1-230ENST00000532245 RGL3Q3MIN7 710 aa11.05□□□□□ -0.64
CTNND1-230ENST00000532245 CCNB3Q8WWL7 1395 aa11.04□□□□□ -0.64
CTNND1-230ENST00000532245 DNAJC5BQ9UF47 199 aa11.03□□□□□ -0.64
CTNND1-230ENST00000532245 JPH4Q96JJ6 628 aa11.03□□□□□ -0.64
CTNND1-230ENST00000532245 ZBTB7CA1YPR0 619 aa11.01□□□□□ -0.65
CTNND1-230ENST00000532245 NCAPD3P42695 1498 aa10.99□□□□□ -0.65
CTNND1-230ENST00000532245 FHAD1B1AJZ9 1412 aa10.99□□□□□ -0.65
CTNND1-230ENST00000532245 CC2D2AQ9P2K1 1620 aa10.99□□□□□ -0.65
CTNND1-230ENST00000532245 GGT6Q6P531 493 aa10.99□□□□□ -0.65
CTNND1-230ENST00000532245 A0A0G2JS52 829 aa10.98□□□□□ -0.65
CTNND1-230ENST00000532245 BCL11AQ9H165 835 aa10.98□□□□□ -0.65
CTNND1-230ENST00000532245 HAP1P54257 671 aaPredicted RBP10.95□□□□□ -0.66
CTNND1-230ENST00000532245 NESP48681 1621 aa10.94□□□□□ -0.66
CTNND1-230ENST00000532245 ZNF316A6NFI3 1004 aaPredicted RBP10.94□□□□□ -0.66
CTNND1-230ENST00000532245 RAD54L2Q9Y4B4 1467 aa10.94□□□□□ -0.66
CTNND1-230ENST00000532245 CLSPNQ9HAW4 1339 aa10.94□□□□□ -0.66
CTNND1-230ENST00000532245 EFCAB2Q5VUJ9 269 aa10.93□□□□□ -0.66
CTNND1-230ENST00000532245 RAPGEF2Q9Y4G8 1499 aa10.92□□□□□ -0.66
CTNND1-230ENST00000532245 CANXP27824 592 aaKnown RBP10.92□□□□□ -0.66
CTNND1-230ENST00000532245 AQRO60306 1485 aaKnown RBP eCLIP10.92□□□□□ -0.662e-9■■■□□ 18.1
CTNND1-230ENST00000532245 TMC1Q8TDI8 760 aa10.91□□□□□ -0.66
CTNND1-230ENST00000532245 FGD5Q6ZNL6 1462 aa10.9□□□□□ -0.66
CTNND1-230ENST00000532245 LMOD2Q6P5Q4 547 aa10.9□□□□□ -0.66
CTNND1-230ENST00000532245 KANK1Q14678 1352 aa10.9□□□□□ -0.66
CTNND1-230ENST00000532245 HIRIP3Q9BW71 556 aaPredicted RBP10.9□□□□□ -0.67
CTNND1-230ENST00000532245 FHOD3Q2V2M9 1422 aa10.89□□□□□ -0.67
CTNND1-230ENST00000532245 PTPRGP23470 1445 aa10.89□□□□□ -0.67
CTNND1-230ENST00000532245 GAPVD1Q14C86 1478 aa10.89□□□□□ -0.67
CTNND1-230ENST00000532245 DAXXQ9UER7 740 aaPredicted RBP10.88□□□□□ -0.67
CTNND1-230ENST00000532245 FMN1Q68DA7 1419 aa10.88□□□□□ -0.67
CTNND1-230ENST00000532245 ZBTB47Q9UFB7 747 aaPredicted RBP10.88□□□□□ -0.67
CTNND1-230ENST00000532245 POGKQ9P215 609 aa10.87□□□□□ -0.67
CTNND1-230ENST00000532245 DDX10Q13206 875 aaKnown RBP10.87□□□□□ -0.67
CTNND1-230ENST00000532245 HNRNPMP52272 730 aaKnown RBP eCLIP10.86□□□□□ -0.675e-7■■■■□ 21
CTNND1-230ENST00000532245 KANK4Q5T7N3 995 aaPredicted RBP10.86□□□□□ -0.67
CTNND1-230ENST00000532245 FAM69CQ0P6D2 419 aa10.85□□□□□ -0.67
CTNND1-230ENST00000532245 SALL2Q9Y467 1007 aaPredicted RBP10.84□□□□□ -0.67
CTNND1-230ENST00000532245 KIF3BO15066 747 aa10.83□□□□□ -0.68
CTNND1-230ENST00000532245 HDGFP51858 240 aaKnown RBP10.83□□□□□ -0.68
CTNND1-230ENST00000532245 MRC2Q9UBG0 1479 aa10.83□□□□□ -0.68
CTNND1-230ENST00000532245 ARHGAP35Q9NRY4 1499 aa10.82□□□□□ -0.68
CTNND1-230ENST00000532245 RUSC2Q8N2Y8 1516 aa10.82□□□□□ -0.68
CTNND1-230ENST00000532245 ACIN1Q9UKV3 1341 aaKnown RBP10.81□□□□□ -0.68
CTNND1-230ENST00000532245 AEBP2Q6ZN18 517 aaPredicted RBP10.81□□□□□ -0.68
CTNND1-230ENST00000532245 EIF4G2P78344 907 aaKnown RBP eCLIP10.81□□□□□ -0.68
CTNND1-230ENST00000532245 SPAG9O60271 1321 aaKnown RBP10.81□□□□□ -0.68
CTNND1-230ENST00000532245 CARD11Q9BXL7 1154 aa10.81□□□□□ -0.68
CTNND1-230ENST00000532245 FAM9BQ8IZU0 186 aa10.8□□□□□ -0.68
CTNND1-230ENST00000532245 PPM1GO15355 546 aaPredicted RBP10.8□□□□□ -0.68
CTNND1-230ENST00000532245 SAFB2Q14151 953 aaKnown RBP eCLIP10.8□□□□□ -0.68
CTNND1-230ENST00000532245 VPS8Q8N3P4 1428 aa10.8□□□□□ -0.68
CTNND1-230ENST00000532245 SIN3AQ96ST3 1273 aa10.79□□□□□ -0.68
CTNND1-230ENST00000532245 IGF1RP08069 1367 aa10.79□□□□□ -0.68
CTNND1-230ENST00000532245 DCAF11Q8TEB1 546 aa10.78□□□□□ -0.68
CTNND1-230ENST00000532245 MYT1Q01538 1121 aa10.78□□□□□ -0.68
CTNND1-230ENST00000532245 CFTRP13569 1480 aa10.78□□□□□ -0.68
CTNND1-230ENST00000532245 WDR43Q15061 677 aaKnown RBP eCLIP10.78□□□□□ -0.683e-9■■■□□ 15.6
CTNND1-230ENST00000532245 BICRAQ9NZM4 1560 aa10.78□□□□□ -0.68
CTNND1-230ENST00000532245 STK26Q9P289 416 aa10.78□□□□□ -0.68
CTNND1-230ENST00000532245 WASHC2CQ9Y4E1 1318 aa10.78□□□□□ -0.68
CTNND1-230ENST00000532245 FOXD1Q16676 465 aa10.77□□□□□ -0.69
CTNND1-230ENST00000532245 PKD2Q13563 968 aa10.76□□□□□ -0.69
CTNND1-230ENST00000532245 GRIN2BQ13224 1484 aa10.76□□□□□ -0.69
CTNND1-230ENST00000532245 NPM2Q86SE8 214 aaKnown RBP10.75□□□□□ -0.69
CTNND1-230ENST00000532245 HMGXB3Q12766 1538 aa10.75□□□□□ -0.69
CTNND1-230ENST00000532245 NUTM2DQ5VT03 806 aaPredicted RBP10.75□□□□□ -0.69
CTNND1-230ENST00000532245 CCDC18Q5T9S5 1454 aa10.74□□□□□ -0.69
CTNND1-230ENST00000532245 IFT140Q96RY7 1462 aa10.74□□□□□ -0.69
CTNND1-230ENST00000532245 ANKRD30AQ9BXX3 1397 aa10.74□□□□□ -0.69
CTNND1-230ENST00000532245 NUP155O75694 1391 aa10.74□□□□□ -0.69
CTNND1-230ENST00000532245 SOX12O15370 315 aa10.73□□□□□ -0.69
CTNND1-230ENST00000532245 CDCA8Q53HL2 280 aa10.73□□□□□ -0.69
CTNND1-230ENST00000532245 SRPK2P78362 688 aaKnown RBP10.72□□□□□ -0.69
CTNND1-230ENST00000532245 KNSTRNQ9Y448 316 aa10.71□□□□□ -0.69
CTNND1-230ENST00000532245 EID1Q9Y6B2 187 aa10.71□□□□□ -0.69
CTNND1-230ENST00000532245 TNNT2P45379 298 aaPredicted RBP10.71□□□□□ -0.7
CTNND1-230ENST00000532245 PRG4Q92954 1404 aaPredicted RBP10.71□□□□□ -0.7
CTNND1-230ENST00000532245 HNRNPUQ00839 825 aaKnown RBP eCLIP10.71□□□□□ -0.7
CTNND1-230ENST00000532245 MRS2Q9HD23 443 aa10.7□□□□□ -0.7
CTNND1-230ENST00000532245 TOPBP1Q92547 1522 aa10.7□□□□□ -0.7
CTNND1-230ENST00000532245 RSPH4AQ5TD94 716 aa10.7□□□□□ -0.7
CTNND1-230ENST00000532245 ARXQ96QS3 562 aa10.7□□□□□ -0.7
CTNND1-230ENST00000532245 SNAPC4Q5SXM2 1469 aa10.68□□□□□ -0.7
CTNND1-230ENST00000532245 PAK3O75914 559 aaPredicted RBP10.67□□□□□ -0.7
CTNND1-230ENST00000532245 POLA1P09884 1462 aaPredicted RBP10.66□□□□□ -0.7
CTNND1-230ENST00000532245 CFAP53Q96M91 514 aa10.66□□□□□ -0.7
CTNND1-230ENST00000532245 SETD5Q9C0A6 1442 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms