RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 SETD5Q9C0A6 1442 aa15.82■□□□□ 0.12
NXF1-211ENST00000531709 MTUS2Q5JR59 1369 aa15.8■□□□□ 0.12
NXF1-211ENST00000531709 RRP7BPQ9NSQ0 103 aa15.79■□□□□ 0.12
NXF1-211ENST00000531709 ZNF326Q5BKZ1 582 aaKnown RBP15.78■□□□□ 0.12
NXF1-211ENST00000531709 FAM9BQ8IZU0 186 aa15.76■□□□□ 0.11
NXF1-211ENST00000531709 CDK11AQ9UQ88 783 aaPredicted RBP15.76■□□□□ 0.11
NXF1-211ENST00000531709 BICRAQ9NZM4 1560 aa15.75■□□□□ 0.11
NXF1-211ENST00000531709 UNC13AQ9UPW8 1703 aa15.74■□□□□ 0.11
NXF1-211ENST00000531709 PRXQ9BXM0 1461 aa15.73■□□□□ 0.11
NXF1-211ENST00000531709 ANP32EQ9BTT0 268 aa15.72■□□□□ 0.11
NXF1-211ENST00000531709 PPP1R15AO75807 674 aaPredicted RBP15.72■□□□□ 0.11
NXF1-211ENST00000531709 IGF1RP08069 1367 aa15.7■□□□□ 0.1
NXF1-211ENST00000531709 ARHGAP35Q9NRY4 1499 aa15.69■□□□□ 0.1
NXF1-211ENST00000531709 FHAD1B1AJZ9 1412 aa15.69■□□□□ 0.1
NXF1-211ENST00000531709 RRBP1Q9P2E9 1410 aaKnown RBP15.69■□□□□ 0.1
NXF1-211ENST00000531709 TOP2BQ02880 1626 aa15.69■□□□□ 0.1
NXF1-211ENST00000531709 FHOD3Q2V2M9 1422 aa15.68■□□□□ 0.1
NXF1-211ENST00000531709 PHLDB1Q86UU1 1377 aa15.67■□□□□ 0.1
NXF1-211ENST00000531709 SENP3-EIF4A1A0A087X0R7 540 aa15.67■□□□□ 0.1
NXF1-211ENST00000531709 ERICH3Q5RHP9 1530 aa15.65■□□□□ 0.1
NXF1-211ENST00000531709 TIMELESSQ9UNS1 1208 aa15.64■□□□□ 0.09
NXF1-211ENST00000531709 RBM19Q9Y4C8 960 aaKnown RBP15.64■□□□□ 0.09
NXF1-211ENST00000531709 CUX1P39880 1505 aa15.63■□□□□ 0.09
NXF1-211ENST00000531709 MRS2Q9HD23 443 aa15.63■□□□□ 0.09
NXF1-211ENST00000531709 EIF4G2P78344 907 aaKnown RBP eCLIP15.63■□□□□ 0.09
NXF1-211ENST00000531709 ZNF777Q9ULD5 760 aaPredicted RBP15.62■□□□□ 0.09
NXF1-211ENST00000531709 CCER2I3L3R5 266 aa15.62■□□□□ 0.09
NXF1-211ENST00000531709 FOXD1Q16676 465 aa15.61■□□□□ 0.09
NXF1-211ENST00000531709 CADPSQ9ULU8 1353 aa15.6■□□□□ 0.09
NXF1-211ENST00000531709 PEG3Q9GZU2 1588 aa15.6■□□□□ 0.09
NXF1-211ENST00000531709 NCAPD3P42695 1498 aa15.57■□□□□ 0.08
NXF1-211ENST00000531709 LRRC9Q6ZRR7 1453 aa15.57■□□□□ 0.08
NXF1-211ENST00000531709 HSPA5P11021 654 aaKnown RBP15.56■□□□□ 0.08
NXF1-211ENST00000531709 FBLN2P98095 1184 aa15.56■□□□□ 0.08
NXF1-211ENST00000531709 TDRD9Q8NDG6 1382 aaKnown RBP15.55■□□□□ 0.08
NXF1-211ENST00000531709 FGD5Q6ZNL6 1462 aa15.54■□□□□ 0.08
NXF1-211ENST00000531709 SLC4A1APQ9BWU0 796 aaKnown RBP15.53■□□□□ 0.08
NXF1-211ENST00000531709 CFTRP13569 1480 aa15.53■□□□□ 0.08
NXF1-211ENST00000531709 WDR97A6NE52 1622 aa15.52■□□□□ 0.08
NXF1-211ENST00000531709 SALL2Q9Y467 1007 aaPredicted RBP15.51■□□□□ 0.07
NXF1-211ENST00000531709 B4GALNT3Q6L9W6 998 aa15.5■□□□□ 0.07
NXF1-211ENST00000531709 RAD54L2Q9Y4B4 1467 aa15.5■□□□□ 0.07
NXF1-211ENST00000531709 FMN1Q68DA7 1419 aa15.46■□□□□ 0.06
NXF1-211ENST00000531709 TIAM1Q13009 1591 aa15.46■□□□□ 0.06
NXF1-211ENST00000531709 L3MBTL2Q969R5 705 aa15.45■□□□□ 0.06
NXF1-211ENST00000531709 KDM2AQ9Y2K7 1162 aa15.45■□□□□ 0.06
NXF1-211ENST00000531709 MPHOSPH9Q99550 1183 aa15.44■□□□□ 0.06
NXF1-211ENST00000531709 CCDC18Q5T9S5 1454 aa15.44■□□□□ 0.06
NXF1-211ENST00000531709 FANCD2Q9BXW9 1451 aa15.43■□□□□ 0.06
NXF1-211ENST00000531709 CCDC136Q96JN2 1154 aa15.43■□□□□ 0.06
NXF1-211ENST00000531709 BIVM-ERCC5R4GMW8 1640 aa15.43■□□□□ 0.06
NXF1-211ENST00000531709 NBR1Q14596 966 aa15.42■□□□□ 0.06
NXF1-211ENST00000531709 TMC1Q8TDI8 760 aa15.42■□□□□ 0.06
NXF1-211ENST00000531709 PPP4R2Q9NY27 417 aa15.41■□□□□ 0.06
NXF1-211ENST00000531709 FGD6Q6ZV73 1430 aa15.41■□□□□ 0.06
NXF1-211ENST00000531709 MAPKBP1O60336 1514 aa15.41■□□□□ 0.06
NXF1-211ENST00000531709 NPM2Q86SE8 214 aaKnown RBP15.4■□□□□ 0.06
NXF1-211ENST00000531709 RTL5Q5HYW3 569 aaPredicted RBP15.38■□□□□ 0.05
NXF1-211ENST00000531709 HMGXB3Q12766 1538 aa15.37■□□□□ 0.05
NXF1-211ENST00000531709 WASHC2AQ641Q2 1341 aa15.37■□□□□ 0.05
NXF1-211ENST00000531709 ANP32AP39687 249 aaKnown RBP15.35■□□□□ 0.05
NXF1-211ENST00000531709 BCL11AQ9H165 835 aa15.35■□□□□ 0.05
NXF1-211ENST00000531709 CFDP1Q9UEE9 299 aaPredicted RBP15.35■□□□□ 0.05
NXF1-211ENST00000531709 CCDC184Q52MB2 194 aa15.34■□□□□ 0.05
NXF1-211ENST00000531709 CASKIN1Q8WXD9 1431 aa15.34■□□□□ 0.05
NXF1-211ENST00000531709 UACAQ9BZF9 1416 aa15.34■□□□□ 0.05
NXF1-211ENST00000531709 PRKRIP1Q9H875 184 aaPredicted RBP15.33■□□□□ 0.04
NXF1-211ENST00000531709 PCF11O94913 1555 aaKnown RBP15.31■□□□□ 0.04
NXF1-211ENST00000531709 NESP48681 1621 aa15.29■□□□□ 0.04
NXF1-211ENST00000531709 MYOM3Q5VTT5 1437 aa15.29■□□□□ 0.04
NXF1-211ENST00000531709 NCOA2Q15596 1464 aa15.29■□□□□ 0.04
NXF1-211ENST00000531709 FYCO1Q9BQS8 1478 aa15.29■□□□□ 0.04
NXF1-211ENST00000531709 CARD11Q9BXL7 1154 aa15.28■□□□□ 0.04
NXF1-211ENST00000531709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.28■□□□□ 0.041e-7■■■□□ 16.1
NXF1-211ENST00000531709 MYT1LQ9UL68 1186 aa15.28■□□□□ 0.04
NXF1-211ENST00000531709 RGL3Q3MIN7 710 aa15.28■□□□□ 0.04
NXF1-211ENST00000531709 ZNF644Q9H582 1327 aaPredicted RBP15.27■□□□□ 0.04
NXF1-211ENST00000531709 DAXXQ9UER7 740 aaPredicted RBP15.27■□□□□ 0.03
NXF1-211ENST00000531709 TSPY4P0CV99 314 aa15.26■□□□□ 0.03
NXF1-211ENST00000531709 TSPY10P0CW01 314 aa15.26■□□□□ 0.03
NXF1-211ENST00000531709 CHMP7Q8WUX9 453 aaPredicted RBP15.26■□□□□ 0.03
NXF1-211ENST00000531709 PKD2Q13563 968 aa15.25■□□□□ 0.03
NXF1-211ENST00000531709 HFM1A2PYH4 1435 aa15.25■□□□□ 0.03
NXF1-211ENST00000531709 POLA1P09884 1462 aaPredicted RBP15.25■□□□□ 0.03
NXF1-211ENST00000531709 MAP3K1Q13233 1512 aa15.25■□□□□ 0.03
NXF1-211ENST00000531709 ZBTB47Q9UFB7 747 aaPredicted RBP15.24■□□□□ 0.03
NXF1-211ENST00000531709 NAIPQ13075 1403 aa15.24■□□□□ 0.03
NXF1-211ENST00000531709 C11orf95C9JLR9 678 aaPredicted RBP15.24■□□□□ 0.03
NXF1-211ENST00000531709 PTPRKQ15262 1439 aa15.23■□□□□ 0.03
NXF1-211ENST00000531709 NBPF8Q3BBV2 869 aa15.22■□□□□ 0.03
NXF1-211ENST00000531709 GAPVD1Q14C86 1478 aa15.21■□□□□ 0.03
NXF1-211ENST00000531709 DCAF11Q8TEB1 546 aa15.21■□□□□ 0.02
NXF1-211ENST00000531709 TOPBP1Q92547 1522 aa15.2■□□□□ 0.02
NXF1-211ENST00000531709 CCDC7Q96M83 1385 aa15.2■□□□□ 0.02
NXF1-211ENST00000531709 KIF7Q2M1P5 1343 aa15.2■□□□□ 0.02
NXF1-211ENST00000531709 MSH5O43196 834 aa15.19■□□□□ 0.02
NXF1-211ENST00000531709 ERICH6BQ5W0A0 696 aa15.19■□□□□ 0.02
NXF1-211ENST00000531709 NOP58Q9Y2X3 529 aaKnown RBP15.19■□□□□ 0.02
NXF1-211ENST00000531709 PLEKHD1A6NEE1 506 aa15.19■□□□□ 0.02
NXF1-211ENST00000531709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms