RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 CEP162Q5TB80 1403 aa11.32□□□□□ -0.6
CTNND1-219ENST00000528621 CCDC136Q96JN2 1154 aa11.31□□□□□ -0.6
CTNND1-219ENST00000528621 BAZ1AQ9NRL2 1556 aaPredicted RBP11.3□□□□□ -0.6
CTNND1-219ENST00000528621 MRS2Q9HD23 443 aa11.3□□□□□ -0.6
CTNND1-219ENST00000528621 EIF4G2P78344 907 aaKnown RBP eCLIP11.3□□□□□ -0.6
CTNND1-219ENST00000528621 TNIKQ9UKE5 1360 aa11.29□□□□□ -0.6
CTNND1-219ENST00000528621 MYH16Q9H6N6 1097 aa11.29□□□□□ -0.6
CTNND1-219ENST00000528621 PLEKHD1A6NEE1 506 aa11.27□□□□□ -0.61
CTNND1-219ENST00000528621 CDCA8Q53HL2 280 aa11.27□□□□□ -0.61
CTNND1-219ENST00000528621 RRP7BPQ9NSQ0 103 aa11.26□□□□□ -0.61
CTNND1-219ENST00000528621 EIF5BO60841 1220 aaKnown RBP11.26□□□□□ -0.61
CTNND1-219ENST00000528621 PPP1R15AO75807 674 aaPredicted RBP11.24□□□□□ -0.61
CTNND1-219ENST00000528621 DDRGK1Q96HY6 314 aa11.23□□□□□ -0.61
CTNND1-219ENST00000528621 ZBTB7CA1YPR0 619 aa11.21□□□□□ -0.61
CTNND1-219ENST00000528621 KCNH8Q96L42 1107 aa11.21□□□□□ -0.61
CTNND1-219ENST00000528621 CFAP53Q96M91 514 aa11.2□□□□□ -0.62
CTNND1-219ENST00000528621 FHAD1B1AJZ9 1412 aa11.2□□□□□ -0.62
CTNND1-219ENST00000528621 MYO15BQ96JP2 1530 aa11.2□□□□□ -0.62
CTNND1-219ENST00000528621 MIER1Q8N108 512 aa11.18□□□□□ -0.62
CTNND1-219ENST00000528621 C14orf37Q86TY3 774 aa11.18□□□□□ -0.62
CTNND1-219ENST00000528621 BECN1Q14457 450 aa11.18□□□□□ -0.62
CTNND1-219ENST00000528621 ERCC6Q03468 1493 aa11.18□□□□□ -0.62
CTNND1-219ENST00000528621 NBR1Q14596 966 aa11.17□□□□□ -0.62
CTNND1-219ENST00000528621 ANP32EQ9BTT0 268 aa11.17□□□□□ -0.62
CTNND1-219ENST00000528621 HIRIP3Q9BW71 556 aaPredicted RBP11.17□□□□□ -0.62
CTNND1-219ENST00000528621 CFDP1Q9UEE9 299 aaPredicted RBP11.16□□□□□ -0.62
CTNND1-219ENST00000528621 IRX6P78412 446 aaPredicted RBP11.16□□□□□ -0.62
CTNND1-219ENST00000528621 A0A0G2JS52 829 aa11.14□□□□□ -0.63
CTNND1-219ENST00000528621 KNSTRNQ9Y448 316 aa11.14□□□□□ -0.63
CTNND1-219ENST00000528621 GLIPR1L2Q4G1C9 344 aa11.13□□□□□ -0.63
CTNND1-219ENST00000528621 EIF4G1Q04637 1599 aaKnown RBP11.13□□□□□ -0.63
CTNND1-219ENST00000528621 SENP3Q9H4L4 574 aaPredicted RBP11.13□□□□□ -0.63
CTNND1-219ENST00000528621 RGL3Q3MIN7 710 aa11.12□□□□□ -0.63
CTNND1-219ENST00000528621 CASC1Q6TDU7 716 aa11.12□□□□□ -0.63
CTNND1-219ENST00000528621 ARID4BQ4LE39 1312 aaPredicted RBP11.12□□□□□ -0.63
CTNND1-219ENST00000528621 NCLP19338 710 aaKnown RBP11.12□□□□□ -0.63
CTNND1-219ENST00000528621 CARD11Q9BXL7 1154 aa11.11□□□□□ -0.63
CTNND1-219ENST00000528621 CHMP4BQ9H444 224 aaKnown RBP11.11□□□□□ -0.63
CTNND1-219ENST00000528621 SMARCA2P51531 1590 aa11.11□□□□□ -0.63
CTNND1-219ENST00000528621 CCNB3Q8WWL7 1395 aa11.11□□□□□ -0.63
CTNND1-219ENST00000528621 KANK1Q14678 1352 aa11.11□□□□□ -0.63
CTNND1-219ENST00000528621 PNNQ9H307 717 aaKnown RBP11.1□□□□□ -0.63
CTNND1-219ENST00000528621 TIMELESSQ9UNS1 1208 aa11.1□□□□□ -0.63
CTNND1-219ENST00000528621 ARXQ96QS3 562 aa11.1□□□□□ -0.63
CTNND1-219ENST00000528621 GOLGA6L22H0YM25 854 aa11.09□□□□□ -0.63
CTNND1-219ENST00000528621 CDK11BP21127 795 aaKnown RBP11.09□□□□□ -0.63
CTNND1-219ENST00000528621 HAP1P54257 671 aaPredicted RBP11.08□□□□□ -0.64
CTNND1-219ENST00000528621 PLEKHG5O94827 1062 aa11.08□□□□□ -0.64
CTNND1-219ENST00000528621 NUDCQ9Y266 331 aa11.08□□□□□ -0.64
CTNND1-219ENST00000528621 MS4A1P11836 297 aa11.08□□□□□ -0.64
CTNND1-219ENST00000528621 MAPK8IP3Q9UPT6 1336 aa11.07□□□□□ -0.64
CTNND1-219ENST00000528621 FTSJ3Q8IY81 847 aaKnown RBP11.07□□□□□ -0.64
CTNND1-219ENST00000528621 CARMIL1Q5VZK9 1371 aa11.06□□□□□ -0.64
CTNND1-219ENST00000528621 ARHGAP35Q9NRY4 1499 aa11.06□□□□□ -0.64
CTNND1-219ENST00000528621 CUX2O14529 1486 aa11.05□□□□□ -0.64
CTNND1-219ENST00000528621 POGKQ9P215 609 aa11.04□□□□□ -0.64
CTNND1-219ENST00000528621 PPM1GO15355 546 aaPredicted RBP11.04□□□□□ -0.64
CTNND1-219ENST00000528621 HDGFP51858 240 aaKnown RBP11.03□□□□□ -0.64
CTNND1-219ENST00000528621 LAS1LQ9Y4W2 734 aaKnown RBP11.02□□□□□ -0.64
CTNND1-219ENST00000528621 TMF1P82094 1093 aa11.02□□□□□ -0.65
CTNND1-219ENST00000528621 SETD5Q9C0A6 1442 aa11.01□□□□□ -0.65
CTNND1-219ENST00000528621 TRIM44Q96DX7 344 aaPredicted RBP11.01□□□□□ -0.65
CTNND1-219ENST00000528621 CARMIL2Q6F5E8 1435 aa11.01□□□□□ -0.65
CTNND1-219ENST00000528621 PPP4R2Q9NY27 417 aa11□□□□□ -0.65
CTNND1-219ENST00000528621 TOP2AP11388 1531 aaKnown RBP11□□□□□ -0.65
CTNND1-219ENST00000528621 VPS8Q8N3P4 1428 aa11□□□□□ -0.65
CTNND1-219ENST00000528621 CC2D1BQ5T0F9 858 aaKnown RBP10.99□□□□□ -0.65
CTNND1-219ENST00000528621 PDS5BQ9NTI5 1447 aa10.99□□□□□ -0.65
CTNND1-219ENST00000528621 CCDC88BA6NC98 1476 aa10.99□□□□□ -0.65
CTNND1-219ENST00000528621 ZRSR1Q15695 479 aaKnown RBP10.99□□□□□ -0.65
CTNND1-219ENST00000528621 SUPT16HQ9Y5B9 1047 aaKnown RBP10.99□□□□□ -0.65
CTNND1-219ENST00000528621 CFAP44Q96MT7 982 aa10.98□□□□□ -0.65
CTNND1-219ENST00000528621 CECR2Q9BXF3 1484 aa10.98□□□□□ -0.65
CTNND1-219ENST00000528621 SIN3AQ96ST3 1273 aa10.98□□□□□ -0.65
CTNND1-219ENST00000528621 CCER2I3L3R5 266 aa10.97□□□□□ -0.65
CTNND1-219ENST00000528621 FMN1Q68DA7 1419 aa10.97□□□□□ -0.65
CTNND1-219ENST00000528621 NEUROD2Q15784 382 aa10.97□□□□□ -0.65
CTNND1-219ENST00000528621 PTMAP06454 111 aaKnown RBP10.94□□□□□ -0.66
CTNND1-219ENST00000528621 TNNT2P45379 298 aaPredicted RBP10.94□□□□□ -0.66
CTNND1-219ENST00000528621 SOGA1O94964 1423 aa10.94□□□□□ -0.66
CTNND1-219ENST00000528621 FRAT1Q92837 279 aaPredicted RBP10.94□□□□□ -0.66
CTNND1-219ENST00000528621 MROH2BQ7Z745 1585 aa10.94□□□□□ -0.66
CTNND1-219ENST00000528621 SENP3-EIF4A1A0A087X0R7 540 aa10.94□□□□□ -0.66
CTNND1-219ENST00000528621 DCAF11Q8TEB1 546 aa10.93□□□□□ -0.66
CTNND1-219ENST00000528621 U2SURPO15042 1029 aaKnown RBP10.93□□□□□ -0.66
CTNND1-219ENST00000528621 OS9Q13438 667 aaPredicted RBP10.93□□□□□ -0.66
CTNND1-219ENST00000528621 LMOD2Q6P5Q4 547 aa10.93□□□□□ -0.66
CTNND1-219ENST00000528621 ABCC8Q09428 1581 aa10.91□□□□□ -0.66
CTNND1-219ENST00000528621 EIF3AQ14152 1382 aaKnown RBP10.91□□□□□ -0.66
CTNND1-219ENST00000528621 HSP90AB1P08238 724 aaKnown RBP10.91□□□□□ -0.66
CTNND1-219ENST00000528621 GOLGA6L6A8MZA4 724 aa10.91□□□□□ -0.66
CTNND1-219ENST00000528621 KTN1Q86UP2 1357 aaKnown RBP10.9□□□□□ -0.66
CTNND1-219ENST00000528621 NPHP1O15259 732 aa10.9□□□□□ -0.66
CTNND1-219ENST00000528621 ANKRD30AQ9BXX3 1397 aa10.89□□□□□ -0.67
CTNND1-219ENST00000528621 ERICH6BQ5W0A0 696 aa10.89□□□□□ -0.67
CTNND1-219ENST00000528621 MORC1Q86VD1 984 aa10.89□□□□□ -0.67
CTNND1-219ENST00000528621 RGS3P49796 1198 aa10.89□□□□□ -0.67
CTNND1-219ENST00000528621 SRPK2P78362 688 aaKnown RBP10.89□□□□□ -0.67
CTNND1-219ENST00000528621 TPRNQ4KMQ1 711 aa10.89□□□□□ -0.67
CTNND1-219ENST00000528621 CALD1Q05682 793 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms