RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-222ENST00000527718 PRKAR2AP13861 404 aaKnown RBP10.09□□□□□ -0.79
PABPC4-222ENST00000527718 NESP48681 1621 aa10.07□□□□□ -0.8
PABPC4-222ENST00000527718 WRNQ14191 1432 aaPredicted RBP eCLIP10.07□□□□□ -0.8
PABPC4-222ENST00000527718 LAMC3Q9Y6N6 1575 aa10.05□□□□□ -0.8
PABPC4-222ENST00000527718 CFTRP13569 1480 aa10.04□□□□□ -0.8
PABPC4-222ENST00000527718 CADPSQ9ULU8 1353 aa10.03□□□□□ -0.8
PABPC4-222ENST00000527718 ZNF692Q9BU19 519 aaPredicted RBP10.01□□□□□ -0.81
PABPC4-222ENST00000527718 ERCC6Q03468 1493 aa10□□□□□ -0.81
PABPC4-222ENST00000527718 CLEC11AQ9Y240 323 aa9.99□□□□□ -0.81
PABPC4-222ENST00000527718 PDS5BQ9NTI5 1447 aa9.97□□□□□ -0.81
PABPC4-222ENST00000527718 ABCC8Q09428 1581 aa9.97□□□□□ -0.81
PABPC4-222ENST00000527718 GABBR2O75899 941 aa9.95□□□□□ -0.82
PABPC4-222ENST00000527718 KIF21AQ7Z4S6 1674 aa9.95□□□□□ -0.82
PABPC4-222ENST00000527718 CSRNP3Q8WYN3 585 aa9.93□□□□□ -0.82
PABPC4-222ENST00000527718 PRDM2Q13029 1718 aa9.93□□□□□ -0.82
PABPC4-222ENST00000527718 TOP2BQ02880 1626 aa9.93□□□□□ -0.82
PABPC4-222ENST00000527718 FAM9AQ8IZU1 332 aaPredicted RBP9.91□□□□□ -0.82
PABPC4-222ENST00000527718 FANCD2Q9BXW9 1451 aa9.91□□□□□ -0.82
PABPC4-222ENST00000527718 THOC2Q8NI27 1593 aaKnown RBP9.89□□□□□ -0.83
PABPC4-222ENST00000527718 CEP164Q9UPV0 1460 aa9.89□□□□□ -0.83
PABPC4-222ENST00000527718 KIF27Q86VH2 1401 aa9.89□□□□□ -0.83
PABPC4-222ENST00000527718 BIVM-ERCC5R4GMW8 1640 aa9.89□□□□□ -0.83
PABPC4-222ENST00000527718 CHADLQ6NUI6 762 aa9.88□□□□□ -0.83
PABPC4-222ENST00000527718 CUX2O14529 1486 aa9.87□□□□□ -0.83
PABPC4-222ENST00000527718 GOLGA3Q08378 1498 aa9.86□□□□□ -0.83
PABPC4-222ENST00000527718 MRC2Q9UBG0 1479 aa9.86□□□□□ -0.83
PABPC4-222ENST00000527718 SYNJ1O43426 1573 aa9.86□□□□□ -0.83
PABPC4-222ENST00000527718 PRR29P0C7W0 189 aa9.85□□□□□ -0.83
PABPC4-222ENST00000527718 LOC105371045A0A1W2PR82 267 aa9.84□□□□□ -0.83
PABPC4-222ENST00000527718 SLC24A1O60721 1099 aa9.84□□□□□ -0.83
PABPC4-222ENST00000527718 LHX8Q68G74 356 aa9.84□□□□□ -0.83
PABPC4-222ENST00000527718 TNIKQ9UKE5 1360 aa9.84□□□□□ -0.83
PABPC4-222ENST00000527718 UBTFP17480 764 aaKnown RBP9.83□□□□□ -0.84
PABPC4-222ENST00000527718 WDR62O43379 1518 aa9.82□□□□□ -0.84
PABPC4-222ENST00000527718 URB2Q14146 1524 aaKnown RBP9.82□□□□□ -0.84
PABPC4-222ENST00000527718 SOGA1O94964 1423 aa9.82□□□□□ -0.84
PABPC4-222ENST00000527718 DNMBPQ6XZF7 1577 aa9.81□□□□□ -0.84
PABPC4-222ENST00000527718 CUX1P39880 1505 aa9.81□□□□□ -0.84
PABPC4-222ENST00000527718 KIF21BO75037 1637 aa9.8□□□□□ -0.84
PABPC4-222ENST00000527718 CLCN6P51797 869 aa9.79□□□□□ -0.84
PABPC4-222ENST00000527718 ERICH3Q5RHP9 1530 aa9.78□□□□□ -0.84
PABPC4-222ENST00000527718 POTEIP0CG38 1075 aa9.78□□□□□ -0.84
PABPC4-222ENST00000527718 FARP1Q9Y4F1 1045 aaPredicted RBP9.77□□□□□ -0.85
PABPC4-222ENST00000527718 TOPBP1Q92547 1522 aa9.76□□□□□ -0.85
PABPC4-222ENST00000527718 FGD5Q6ZNL6 1462 aa9.75□□□□□ -0.85
PABPC4-222ENST00000527718 CD44P16070 742 aaKnown RBP9.75□□□□□ -0.85
PABPC4-222ENST00000527718 CEP162Q5TB80 1403 aa9.73□□□□□ -0.85
PABPC4-222ENST00000527718 ABCA10Q8WWZ4 1543 aa9.72□□□□□ -0.85
PABPC4-222ENST00000527718 PRXQ9BXM0 1461 aa9.72□□□□□ -0.85
PABPC4-222ENST00000527718 TRIM26Q12899 539 aaPredicted RBP9.71□□□□□ -0.86
PABPC4-222ENST00000527718 WDR97A6NE52 1622 aa9.69□□□□□ -0.86
PABPC4-222ENST00000527718 POLA1P09884 1462 aaPredicted RBP9.69□□□□□ -0.86
PABPC4-222ENST00000527718 RAPGEF2Q9Y4G8 1499 aa9.69□□□□□ -0.86
PABPC4-222ENST00000527718 IFT140Q96RY7 1462 aa9.68□□□□□ -0.86
PABPC4-222ENST00000527718 CARMIL1Q5VZK9 1371 aa9.68□□□□□ -0.86
PABPC4-222ENST00000527718 ZNF579Q8NAF0 562 aaKnown RBP9.68□□□□□ -0.86
PABPC4-222ENST00000527718 EHMT2Q96KQ7 1210 aa9.68□□□□□ -0.86
PABPC4-222ENST00000527718 RUSC2Q8N2Y8 1516 aa9.67□□□□□ -0.86
PABPC4-222ENST00000527718 CLIP1P30622 1438 aa9.67□□□□□ -0.86
PABPC4-222ENST00000527718 IGF1RP08069 1367 aa9.66□□□□□ -0.86
PABPC4-222ENST00000527718 CUL7Q14999 1698 aa9.66□□□□□ -0.86
PABPC4-222ENST00000527718 TARBP1Q13395 1621 aaKnown RBP9.66□□□□□ -0.86
PABPC4-222ENST00000527718 ZNF608Q9ULD9 1512 aaPredicted RBP9.64□□□□□ -0.87
PABPC4-222ENST00000527718 RAD54L2Q9Y4B4 1467 aa9.64□□□□□ -0.87
PABPC4-222ENST00000527718 GAPVD1Q14C86 1478 aa9.63□□□□□ -0.87
PABPC4-222ENST00000527718 CREBZFQ9NS37 354 aa9.62□□□□□ -0.87
PABPC4-222ENST00000527718 EIF4G3O43432 1585 aaKnown RBP9.6□□□□□ -0.87
PABPC4-222ENST00000527718 VPS8Q8N3P4 1428 aa9.6□□□□□ -0.87
PABPC4-222ENST00000527718 FHAD1B1AJZ9 1412 aa9.59□□□□□ -0.87
PABPC4-222ENST00000527718 TDRD9Q8NDG6 1382 aaKnown RBP9.59□□□□□ -0.87
PABPC4-222ENST00000527718 AQRO60306 1485 aaKnown RBP eCLIP9.59□□□□□ -0.878e-11■■■■■ 43.3
PABPC4-222ENST00000527718 GRIN2BQ13224 1484 aa9.59□□□□□ -0.87
PABPC4-222ENST00000527718 PCGF6Q9BYE7 350 aa9.58□□□□□ -0.88
PABPC4-222ENST00000527718 STAG3Q9UJ98 1225 aa9.58□□□□□ -0.88
PABPC4-222ENST00000527718 EFCAB5A4FU69 1503 aa9.56□□□□□ -0.88
PABPC4-222ENST00000527718 ABCA5Q8WWZ7 1642 aa9.56□□□□□ -0.88
PABPC4-222ENST00000527718 ZEB1P37275 1124 aaPredicted RBP9.55□□□□□ -0.88
PABPC4-222ENST00000527718 DCBLD2Q96PD2 775 aa9.55□□□□□ -0.88
PABPC4-222ENST00000527718 ZRANB1Q9UGI0 708 aa9.54□□□□□ -0.88
PABPC4-222ENST00000527718 DNAJC5Q9H3Z4 198 aa9.53□□□□□ -0.88
PABPC4-222ENST00000527718 FMN1Q68DA7 1419 aa9.53□□□□□ -0.88
PABPC4-222ENST00000527718 MAGI1Q96QZ7 1491 aaPredicted RBP9.52□□□□□ -0.89
PABPC4-222ENST00000527718 GALR2O43603 387 aaPredicted RBP9.51□□□□□ -0.89
PABPC4-222ENST00000527718 PBRM1Q86U86 1689 aa9.51□□□□□ -0.89
PABPC4-222ENST00000527718 SNAPC4Q5SXM2 1469 aa9.49□□□□□ -0.89
PABPC4-222ENST00000527718 RANGAP1P46060 587 aaPredicted RBP9.49□□□□□ -0.89
PABPC4-222ENST00000527718 CHD1O14646 1710 aa9.48□□□□□ -0.89
PABPC4-222ENST00000527718 MAP3K1Q13233 1512 aa9.48□□□□□ -0.89
PABPC4-222ENST00000527718 MNX1P50219 401 aaPredicted RBP9.48□□□□□ -0.89
PABPC4-222ENST00000527718 CHMP7Q8WUX9 453 aaPredicted RBP9.47□□□□□ -0.89
PABPC4-222ENST00000527718 ARHGAP35Q9NRY4 1499 aa9.46□□□□□ -0.9
PABPC4-222ENST00000527718 ADAMTS12P58397 1594 aa9.46□□□□□ -0.9
PABPC4-222ENST00000527718 CTTNBP2Q8WZ74 1663 aa9.45□□□□□ -0.9
PABPC4-222ENST00000527718 SPDYE4A6NLX3 237 aa9.45□□□□□ -0.9
PABPC4-222ENST00000527718 OTUD5Q96G74 571 aa9.45□□□□□ -0.9
PABPC4-222ENST00000527718 SYNJ2O15056 1496 aa9.45□□□□□ -0.9
PABPC4-222ENST00000527718 ARAP1Q96P48 1450 aa9.44□□□□□ -0.9
PABPC4-222ENST00000527718 FYCO1Q9BQS8 1478 aa9.44□□□□□ -0.9
PABPC4-222ENST00000527718 KIAA0586Q9BVV6 1533 aa9.43□□□□□ -0.9
PABPC4-222ENST00000527718 CARMIL2Q6F5E8 1435 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms