RNA–Protein interactions for RNA: ENST00000526913.5

KNL1-203, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,584 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-203ENST00000526913 PLCD3Q8N3E9 789 aa2.76□□□□□ -1.97
KNL1-203ENST00000526913 CAPN15O75808 1086 aa2.76□□□□□ -1.97
KNL1-203ENST00000526913 MIER1Q8N108 512 aa2.76□□□□□ -1.97
KNL1-203ENST00000526913 PABPN1Q86U42 306 aaKnown RBP eCLIP2.76□□□□□ -1.97
KNL1-203ENST00000526913 HRCP23327 699 aa2.76□□□□□ -1.97
KNL1-203ENST00000526913 TRIM26Q12899 539 aaPredicted RBP2.75□□□□□ -1.97
KNL1-203ENST00000526913 DSG3P32926 999 aa2.74□□□□□ -1.97
KNL1-203ENST00000526913 ZNF692Q9BU19 519 aaPredicted RBP2.74□□□□□ -1.97
KNL1-203ENST00000526913 C1orf115Q9H7X2 142 aa2.74□□□□□ -1.97
KNL1-203ENST00000526913 DHX30Q7L2E3 1194 aaKnown RBP eCLIP2.74□□□□□ -1.97
KNL1-203ENST00000526913 PODXL2Q9NZ53 605 aa2.73□□□□□ -1.97
KNL1-203ENST00000526913 SLC24A3Q9HC58 644 aa2.73□□□□□ -1.97
KNL1-203ENST00000526913 SSUH2Q9Y2M2 353 aa2.73□□□□□ -1.97
KNL1-203ENST00000526913 NUBP1P53384 320 aa2.72□□□□□ -1.97
KNL1-203ENST00000526913 LMOD2Q6P5Q4 547 aa2.72□□□□□ -1.97
KNL1-203ENST00000526913 STK25O00506 426 aa2.72□□□□□ -1.97
KNL1-203ENST00000526913 HOMEZQ8IX15 550 aa2.72□□□□□ -1.97
KNL1-203ENST00000526913 GPBP1L1Q9HC44 474 aaPredicted RBP2.72□□□□□ -1.97
KNL1-203ENST00000526913 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP2.71□□□□□ -1.98
KNL1-203ENST00000526913 SEMA3EO15041 775 aa2.71□□□□□ -1.98
KNL1-203ENST00000526913 ZFP91Q96JP5 570 aaPredicted RBP2.71□□□□□ -1.98
KNL1-203ENST00000526913 MNX1P50219 401 aaPredicted RBP2.71□□□□□ -1.98
KNL1-203ENST00000526913 BCL11BQ9C0K0 894 aaPredicted RBP2.71□□□□□ -1.98
KNL1-203ENST00000526913 RASEFQ8IZ41 740 aa2.71□□□□□ -1.98
KNL1-203ENST00000526913 ZC3H15Q8WU90 426 aaKnown RBP2.7□□□□□ -1.98
KNL1-203ENST00000526913 PPP1R37O75864 691 aa2.7□□□□□ -1.98
KNL1-203ENST00000526913 ARID3CA6NKF2 412 aa2.7□□□□□ -1.98
KNL1-203ENST00000526913 ZBTB12Q9Y330 459 aaPredicted RBP2.7□□□□□ -1.98
KNL1-203ENST00000526913 PYGBP11216 843 aa2.7□□□□□ -1.98
KNL1-203ENST00000526913 ARID3AQ99856 593 aa2.69□□□□□ -1.98
KNL1-203ENST00000526913 RIOK3O14730 519 aaKnown RBP2.69□□□□□ -1.98
KNL1-203ENST00000526913 NEUROD2Q15784 382 aa2.68□□□□□ -1.98
KNL1-203ENST00000526913 STK24Q9Y6E0 443 aa2.68□□□□□ -1.98
KNL1-203ENST00000526913 MFRPQ9BY79 579 aa2.66□□□□□ -1.98
KNL1-203ENST00000526913 IL27Q8NEV9 243 aa2.66□□□□□ -1.98
KNL1-203ENST00000526913 NECTIN2Q92692 538 aa2.66□□□□□ -1.98
KNL1-203ENST00000526913 DCAF8Q5TAQ9 597 aa2.66□□□□□ -1.98
KNL1-203ENST00000526913 CREBZFQ9NS37 354 aa2.66□□□□□ -1.98
KNL1-203ENST00000526913 STAG3Q9UJ98 1225 aa2.66□□□□□ -1.98
KNL1-203ENST00000526913 NCKAP5LQ9HCH0 1330 aa2.65□□□□□ -1.99
KNL1-203ENST00000526913 RBM26Q5T8P6 1007 aaKnown RBP2.65□□□□□ -1.99
KNL1-203ENST00000526913 MLLT3P42568 568 aaPredicted RBP2.64□□□□□ -1.99
KNL1-203ENST00000526913 MKRN3Q13064 507 aaKnown RBP2.64□□□□□ -1.99
KNL1-203ENST00000526913 PCDHB8Q9UN66 801 aa2.64□□□□□ -1.99
KNL1-203ENST00000526913 PCDHB13Q9Y5F0 798 aa2.64□□□□□ -1.99
KNL1-203ENST00000526913 SPDYE2BA6NHP3 402 aa2.64□□□□□ -1.99
KNL1-203ENST00000526913 SPDYE6P0CI01 402 aa2.64□□□□□ -1.99
KNL1-203ENST00000526913 SPDYE2Q495Y8 402 aa2.64□□□□□ -1.99
KNL1-203ENST00000526913 LCE2DQ5TA82 110 aaPredicted RBP2.64□□□□□ -1.99
KNL1-203ENST00000526913 ZMYND10O75800 440 aa2.63□□□□□ -1.99
KNL1-203ENST00000526913 POTEHQ6S545 545 aa2.63□□□□□ -1.99
KNL1-203ENST00000526913 TESPA1A2RU30 521 aaPredicted RBP2.62□□□□□ -1.99
KNL1-203ENST00000526913 VGFO15240 615 aaPredicted RBP2.62□□□□□ -1.99
KNL1-203ENST00000526913 FAM117AQ9C073 453 aa2.62□□□□□ -1.99
KNL1-203ENST00000526913 ZNF428Q96B54 188 aa2.62□□□□□ -1.99
KNL1-203ENST00000526913 PLEKHG3A1L390 1219 aa2.6□□□□□ -1.99
KNL1-203ENST00000526913 CHADLQ6NUI6 762 aa2.6□□□□□ -1.99
KNL1-203ENST00000526913 NPM2Q86SE8 214 aaKnown RBP2.6□□□□□ -1.99
KNL1-203ENST00000526913 KDM4CQ9H3R0 1056 aa2.6□□□□□ -1.99
KNL1-203ENST00000526913 CACNB1Q02641 598 aaPredicted RBP2.6□□□□□ -1.99
KNL1-203ENST00000526913 FBXO22Q8NEZ5 403 aa2.6□□□□□ -1.99
KNL1-203ENST00000526913 CLUAP1Q96AJ1 413 aa2.6□□□□□ -1.99
KNL1-203ENST00000526913 EVX2Q03828 476 aa2.6□□□□□ -1.99
KNL1-203ENST00000526913 AKT1S1Q96B36 256 aa2.6□□□□□ -1.99
KNL1-203ENST00000526913 MS4A4AQ96JQ5 239 aa2.6□□□□□ -1.99
KNL1-203ENST00000526913 PHF8Q9UPP1 1060 aa2.6□□□□□ -1.99
KNL1-203ENST00000526913 CLEC11AQ9Y240 323 aa2.59□□□□□ -1.99
KNL1-203ENST00000526913 LOC105371045A0A1W2PR82 267 aa2.59□□□□□ -1.99
KNL1-203ENST00000526913 CHRM1P11229 460 aaPredicted RBP2.59□□□□□ -1.99
KNL1-203ENST00000526913 FECHP22830 423 aa2.59□□□□□ -1.99
KNL1-203ENST00000526913 GSE1Q14687 1217 aa2.59□□□□□ -1.99
KNL1-203ENST00000526913 SGIP1Q9BQI5 828 aa2.59□□□□□ -1.99
KNL1-203ENST00000526913 FBXO31Q5XUX0 539 aaPredicted RBP2.59□□□□□ -1.99
KNL1-203ENST00000526913 P3H3Q8IVL6 736 aa2.59□□□□□ -2
KNL1-203ENST00000526913 TSPYL2Q9H2G4 693 aaPredicted RBP2.59□□□□□ -2
KNL1-203ENST00000526913 GPR37O15354 613 aa2.58□□□□□ -2
KNL1-203ENST00000526913 EFCAB3Q8N7B9 438 aa2.58□□□□□ -2
KNL1-203ENST00000526913 ZMYND15Q9H091 742 aa2.58□□□□□ -2
KNL1-203ENST00000526913 APBB1O00213 710 aa2.58□□□□□ -2
KNL1-203ENST00000526913 FAM212AQ96EL1 285 aa2.58□□□□□ -2
KNL1-203ENST00000526913 E2F4Q16254 413 aa2.58□□□□□ -2
KNL1-203ENST00000526913 ONECUT3O60422 494 aaPredicted RBP2.57□□□□□ -2
KNL1-203ENST00000526913 BARGINQ6ZT62 677 aa2.57□□□□□ -2
KNL1-203ENST00000526913 FXR2P51116 673 aaKnown RBP eCLIP2.57□□□□□ -2
KNL1-203ENST00000526913 CCDC82Q8N4S0 544 aa2.57□□□□□ -2
KNL1-203ENST00000526913 ARHGEF1Q92888 912 aaKnown RBP2.57□□□□□ -2
KNL1-203ENST00000526913 REPIN1Q9BWE0 567 aaKnown RBP2.57□□□□□ -2
KNL1-203ENST00000526913 TRPC6Q9Y210 931 aa2.57□□□□□ -2
KNL1-203ENST00000526913 PRIM1P49642 420 aaKnown RBP2.57□□□□□ -2
KNL1-203ENST00000526913 IFNL1Q8IU54 200 aa2.57□□□□□ -2
KNL1-203ENST00000526913 POM121Q96HA1 1249 aa2.57□□□□□ -2
KNL1-203ENST00000526913 LARP6Q9BRS8 491 aaKnown RBP2.57□□□□□ -2
KNL1-203ENST00000526913 WDR70Q9NW82 654 aa2.57□□□□□ -2
KNL1-203ENST00000526913 TRIM66O15016 1216 aa2.56□□□□□ -2
KNL1-203ENST00000526913 ZBTB47Q9UFB7 747 aaPredicted RBP2.56□□□□□ -2
KNL1-203ENST00000526913 EMILIN3Q9NT22 766 aa2.56□□□□□ -2
KNL1-203ENST00000526913 CARNS1A5YM72 827 aa2.56□□□□□ -2
KNL1-203ENST00000526913 PDE4DQ08499 809 aa2.56□□□□□ -2
KNL1-203ENST00000526913 CABP2Q9NPB3 220 aa2.55□□□□□ -2
KNL1-203ENST00000526913 IGSF3O75054 1194 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 616.1 ms