RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 ZBTB7CA1YPR0 619 aa12.37□□□□□ -0.43
CTNND1-213ENST00000526357 TULP1O00294 542 aaPredicted RBP12.36□□□□□ -0.43
CTNND1-213ENST00000526357 ERICH6BQ5W0A0 696 aa12.33□□□□□ -0.44
CTNND1-213ENST00000526357 C14orf37Q86TY3 774 aa12.32□□□□□ -0.44
CTNND1-213ENST00000526357 KDM2AQ9Y2K7 1162 aa12.31□□□□□ -0.44
CTNND1-213ENST00000526357 NRDCO43847 1150 aa12.3□□□□□ -0.44
CTNND1-213ENST00000526357 PPM1GO15355 546 aaPredicted RBP12.3□□□□□ -0.44
CTNND1-213ENST00000526357 TSPY4P0CV99 314 aa12.29□□□□□ -0.44
CTNND1-213ENST00000526357 TSPY10P0CW01 314 aa12.29□□□□□ -0.44
CTNND1-213ENST00000526357 NAP1L5Q96NT1 182 aaPredicted RBP12.29□□□□□ -0.44
CTNND1-213ENST00000526357 CFAP53Q96M91 514 aa12.29□□□□□ -0.44
CTNND1-213ENST00000526357 IRX6P78412 446 aaPredicted RBP12.28□□□□□ -0.44
CTNND1-213ENST00000526357 CHIC2Q9UKJ5 165 aa12.27□□□□□ -0.45
CTNND1-213ENST00000526357 PPP1R15AO75807 674 aaPredicted RBP12.27□□□□□ -0.45
CTNND1-213ENST00000526357 TPRNQ4KMQ1 711 aa12.27□□□□□ -0.45
CTNND1-213ENST00000526357 HAP1P54257 671 aaPredicted RBP12.27□□□□□ -0.45
CTNND1-213ENST00000526357 FTSJ3Q8IY81 847 aaKnown RBP12.25□□□□□ -0.45
CTNND1-213ENST00000526357 ABCC9O60706 1549 aa12.24□□□□□ -0.45
CTNND1-213ENST00000526357 PLCB2Q00722 1185 aa12.24□□□□□ -0.45
CTNND1-213ENST00000526357 L1TD1Q5T7N2 865 aaKnown RBP12.23□□□□□ -0.45
CTNND1-213ENST00000526357 PLEKHG5O94827 1062 aa12.23□□□□□ -0.45
CTNND1-213ENST00000526357 EIF4G2P78344 907 aaKnown RBP eCLIP12.23□□□□□ -0.45
CTNND1-213ENST00000526357 CHMP4BQ9H444 224 aaKnown RBP12.23□□□□□ -0.45
CTNND1-213ENST00000526357 CHAF1AQ13111 956 aaPredicted RBP12.23□□□□□ -0.45
CTNND1-213ENST00000526357 CDCA8Q53HL2 280 aa12.21□□□□□ -0.46
CTNND1-213ENST00000526357 FGD1P98174 961 aa12.2□□□□□ -0.46
CTNND1-213ENST00000526357 NPHP1O15259 732 aa12.2□□□□□ -0.46
CTNND1-213ENST00000526357 HSP90AB1P08238 724 aaKnown RBP12.19□□□□□ -0.46
CTNND1-213ENST00000526357 MAPK8IP3Q9UPT6 1336 aa12.17□□□□□ -0.46
CTNND1-213ENST00000526357 GOLGA6L4A6NEF3 574 aa12.17□□□□□ -0.46
CTNND1-213ENST00000526357 OS9Q13438 667 aaPredicted RBP12.17□□□□□ -0.46
CTNND1-213ENST00000526357 CLSTN1O94985 981 aa12.16□□□□□ -0.46
CTNND1-213ENST00000526357 MS4A1P11836 297 aa12.16□□□□□ -0.46
CTNND1-213ENST00000526357 KNSTRNQ9Y448 316 aa12.16□□□□□ -0.46
CTNND1-213ENST00000526357 TAOK2Q9UL54 1235 aa12.16□□□□□ -0.46
CTNND1-213ENST00000526357 KCNJ4P48050 445 aa12.15□□□□□ -0.46
CTNND1-213ENST00000526357 GOLGA2Q08379 1002 aa12.15□□□□□ -0.46
CTNND1-213ENST00000526357 NUDCQ9Y266 331 aa12.15□□□□□ -0.46
CTNND1-213ENST00000526357 NAP1L2Q9ULW6 460 aaPredicted RBP12.15□□□□□ -0.47
CTNND1-213ENST00000526357 MTUS2Q5JR59 1369 aa12.15□□□□□ -0.47
CTNND1-213ENST00000526357 LAS1LQ9Y4W2 734 aaKnown RBP12.14□□□□□ -0.47
CTNND1-213ENST00000526357 MSNP26038 577 aaKnown RBP12.13□□□□□ -0.47
CTNND1-213ENST00000526357 KIAA2012Q0VF49 1180 aa12.12□□□□□ -0.47
CTNND1-213ENST00000526357 PNNQ9H307 717 aaKnown RBP12.12□□□□□ -0.47
CTNND1-213ENST00000526357 NCBP3Q53F19 620 aaKnown RBP12.11□□□□□ -0.47
CTNND1-213ENST00000526357 DRC7Q8IY82 874 aa12.11□□□□□ -0.47
CTNND1-213ENST00000526357 MIER1Q8N108 512 aa12.11□□□□□ -0.47
CTNND1-213ENST00000526357 MCCP23508 829 aa12.11□□□□□ -0.47
CTNND1-213ENST00000526357 HSCBQ8IWL3 235 aa12.1□□□□□ -0.47
CTNND1-213ENST00000526357 CFAP44Q96MT7 982 aa12.1□□□□□ -0.47
CTNND1-213ENST00000526357 SENP3Q9H4L4 574 aaPredicted RBP12.09□□□□□ -0.47
CTNND1-213ENST00000526357 NOP58Q9Y2X3 529 aaKnown RBP12.09□□□□□ -0.47
CTNND1-213ENST00000526357 HIRIP3Q9BW71 556 aaPredicted RBP12.08□□□□□ -0.48
CTNND1-213ENST00000526357 RGS3P49796 1198 aa12.07□□□□□ -0.48
CTNND1-213ENST00000526357 RTN4Q9NQC3 1192 aaKnown RBP12.07□□□□□ -0.48
CTNND1-213ENST00000526357 PPP4R2Q9NY27 417 aa12.07□□□□□ -0.48
CTNND1-213ENST00000526357 DCAF1Q9Y4B6 1507 aa12.07□□□□□ -0.48
CTNND1-213ENST00000526357 FRAT1Q92837 279 aaPredicted RBP12.06□□□□□ -0.48
CTNND1-213ENST00000526357 NOC3LQ8WTT2 800 aaKnown RBP12.06□□□□□ -0.48
CTNND1-213ENST00000526357 NEUROD2Q15784 382 aa12.06□□□□□ -0.48
CTNND1-213ENST00000526357 GNL2Q13823 731 aaKnown RBP12.05□□□□□ -0.48
CTNND1-213ENST00000526357 PTMSP20962 102 aa12.05□□□□□ -0.48
CTNND1-213ENST00000526357 RRP7BPQ9NSQ0 103 aa12.05□□□□□ -0.48
CTNND1-213ENST00000526357 CHMP7Q8WUX9 453 aaPredicted RBP12.04□□□□□ -0.48
CTNND1-213ENST00000526357 SUPT16HQ9Y5B9 1047 aaKnown RBP12.04□□□□□ -0.48
CTNND1-213ENST00000526357 ARID4BQ4LE39 1312 aaPredicted RBP12.04□□□□□ -0.48
CTNND1-213ENST00000526357 RGL3Q3MIN7 710 aa12.04□□□□□ -0.48
CTNND1-213ENST00000526357 RSF1Q96T23 1441 aaPredicted RBP12.03□□□□□ -0.48
CTNND1-213ENST00000526357 LMOD2Q6P5Q4 547 aa12.03□□□□□ -0.48
CTNND1-213ENST00000526357 POGKQ9P215 609 aa12.03□□□□□ -0.48
CTNND1-213ENST00000526357 AMER1Q5JTC6 1135 aaPredicted RBP12.02□□□□□ -0.48
CTNND1-213ENST00000526357 ISY1Q9ULR0 285 aaKnown RBP12.02□□□□□ -0.49
CTNND1-213ENST00000526357 CARD11Q9BXL7 1154 aa12.02□□□□□ -0.49
CTNND1-213ENST00000526357 PLEKHD1A6NEE1 506 aa12□□□□□ -0.49
CTNND1-213ENST00000526357 KCNH8Q96L42 1107 aa12□□□□□ -0.49
CTNND1-213ENST00000526357 HTATSF1O43719 755 aaKnown RBP11.99□□□□□ -0.49
CTNND1-213ENST00000526357 PRM3Q9NNZ6 103 aa11.99□□□□□ -0.49
CTNND1-213ENST00000526357 TPM4P67936 248 aa11.99□□□□□ -0.49
CTNND1-213ENST00000526357 TNNT3P45378 269 aaPredicted RBP11.98□□□□□ -0.49
CTNND1-213ENST00000526357 U2SURPO15042 1029 aaKnown RBP11.98□□□□□ -0.49
CTNND1-213ENST00000526357 USP35Q9P2H5 1018 aa11.98□□□□□ -0.49
CTNND1-213ENST00000526357 GOLGA6L1Q8N7Z2 621 aa11.97□□□□□ -0.49
CTNND1-213ENST00000526357 KIAA1211Q6ZU35 1233 aa11.96□□□□□ -0.5
CTNND1-213ENST00000526357 A0A0U1RQG5 324 aaPredicted RBP11.96□□□□□ -0.5
CTNND1-213ENST00000526357 GBP4Q96PP9 640 aa11.95□□□□□ -0.5
CTNND1-213ENST00000526357 SENP3-EIF4A1A0A087X0R7 540 aa11.95□□□□□ -0.5
CTNND1-213ENST00000526357 SYAP1Q96A49 352 aaPredicted RBP11.94□□□□□ -0.5
CTNND1-213ENST00000526357 CCDC34Q96HJ3 373 aa11.93□□□□□ -0.5
CTNND1-213ENST00000526357 CC2D1BQ5T0F9 858 aaKnown RBP11.93□□□□□ -0.5
CTNND1-213ENST00000526357 CCDC180Q9P1Z9 1646 aa11.93□□□□□ -0.5
CTNND1-213ENST00000526357 CLIP1P30622 1438 aa11.92□□□□□ -0.5
CTNND1-213ENST00000526357 SPRYD3Q8NCJ5 442 aa11.92□□□□□ -0.5
CTNND1-213ENST00000526357 RTF1Q92541 710 aaKnown RBP11.91□□□□□ -0.5
CTNND1-213ENST00000526357 HDGFP51858 240 aaKnown RBP11.91□□□□□ -0.5
CTNND1-213ENST00000526357 SCRIBQ14160 1630 aa11.9□□□□□ -0.5
CTNND1-213ENST00000526357 TMX4Q9H1E5 349 aaPredicted RBP11.9□□□□□ -0.5
CTNND1-213ENST00000526357 TMF1P82094 1093 aa11.9□□□□□ -0.51
CTNND1-213ENST00000526357 CFDP1Q9UEE9 299 aaPredicted RBP11.9□□□□□ -0.51
CTNND1-213ENST00000526357 IPO8O15397 1037 aaKnown RBP11.89□□□□□ -0.51
CTNND1-213ENST00000526357 DEKP35659 375 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms