RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 GALR2O43603 387 aaPredicted RBP13.05□□□□□ -0.32
ATM-208ENST00000525537 POTEB2H3BUK9 544 aa13.03□□□□□ -0.32
ATM-208ENST00000525537 VSIG10Q8N0Z9 540 aa13.03□□□□□ -0.32
ATM-208ENST00000525537 CREBZFQ9NS37 354 aa13.01□□□□□ -0.33
ATM-208ENST00000525537 POTEMA6NI47 508 aa12.99□□□□□ -0.33
ATM-208ENST00000525537 POTEGQ6S5H5 508 aa12.94□□□□□ -0.34
ATM-208ENST00000525537 TAOK2Q9UL54 1235 aa12.9□□□□□ -0.34
ATM-208ENST00000525537 PRKCSHP14314 528 aaPredicted RBP12.88□□□□□ -0.35
ATM-208ENST00000525537 BBXQ8WY36 941 aaPredicted RBP12.88□□□□□ -0.35
ATM-208ENST00000525537 PHF12Q96QT6 1004 aa12.88□□□□□ -0.35
ATM-208ENST00000525537 PELP1Q8IZL8 1130 aaKnown RBP12.87□□□□□ -0.35
ATM-208ENST00000525537 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.87□□□□□ -0.35
ATM-208ENST00000525537 STAG3Q9UJ98 1225 aa12.87□□□□□ -0.35
ATM-208ENST00000525537 SPOCK2Q92563 424 aa12.85□□□□□ -0.35
ATM-208ENST00000525537 PAK3O75914 559 aaPredicted RBP12.84□□□□□ -0.35
ATM-208ENST00000525537 ECM2O94769 699 aaPredicted RBP12.81□□□□□ -0.36
ATM-208ENST00000525537 KLHL34Q8N239 644 aa12.81□□□□□ -0.36
ATM-208ENST00000525537 PCDH10Q9P2E7 1040 aa12.81□□□□□ -0.36
ATM-208ENST00000525537 KDM2AQ9Y2K7 1162 aa12.79□□□□□ -0.36
ATM-208ENST00000525537 NPM1P06748 294 aaKnown RBP eCLIP12.76□□□□□ -0.37
ATM-208ENST00000525537 POTEJP0CG39 1038 aa12.76□□□□□ -0.37
ATM-208ENST00000525537 PAXIP1Q6ZW49 1069 aaPredicted RBP12.76□□□□□ -0.37
ATM-208ENST00000525537 METRNQ9UJH8 293 aa12.75□□□□□ -0.37
ATM-208ENST00000525537 ASTLQ6HA08 431 aaPredicted RBP12.74□□□□□ -0.37
ATM-208ENST00000525537 MNX1P50219 401 aaPredicted RBP12.72□□□□□ -0.37
ATM-208ENST00000525537 CFAP44Q96MT7 982 aa12.72□□□□□ -0.37
ATM-208ENST00000525537 ATMINO43313 823 aaPredicted RBP12.7□□□□□ -0.38
ATM-208ENST00000525537 C7P10643 843 aa12.7□□□□□ -0.38
ATM-208ENST00000525537 SLC39A7Q92504 469 aa12.7□□□□□ -0.38
ATM-208ENST00000525537 MS4A3Q96HJ5 214 aa12.7□□□□□ -0.38
ATM-208ENST00000525537 LCE2DQ5TA82 110 aaPredicted RBP12.69□□□□□ -0.38
ATM-208ENST00000525537 TPRNQ4KMQ1 711 aa12.68□□□□□ -0.38
ATM-208ENST00000525537 RGL2O15211 777 aa12.66□□□□□ -0.38
ATM-208ENST00000525537 MAMSTRQ6ZN01 415 aa12.66□□□□□ -0.38
ATM-208ENST00000525537 PLCD3Q8N3E9 789 aa12.64□□□□□ -0.39
ATM-208ENST00000525537 SPRYD3Q8NCJ5 442 aa12.64□□□□□ -0.39
ATM-208ENST00000525537 FAM163AQ96GL9 167 aaPredicted RBP12.59□□□□□ -0.39
ATM-208ENST00000525537 TSHZ2Q9NRE2 1034 aa12.58□□□□□ -0.4
ATM-208ENST00000525537 SCUBE2Q9NQ36 999 aa12.56□□□□□ -0.4
ATM-208ENST00000525537 ATN1P54259 1190 aaPredicted RBP12.55□□□□□ -0.4
ATM-208ENST00000525537 MIER1Q8N108 512 aa12.55□□□□□ -0.4
ATM-208ENST00000525537 POTEFA5A3E0 1075 aa12.5□□□□□ -0.41
ATM-208ENST00000525537 CHGAP10645 457 aaKnown RBP12.5□□□□□ -0.41
ATM-208ENST00000525537 CCDC61Q9Y6R9 512 aa12.48□□□□□ -0.41
ATM-208ENST00000525537 TSPYL2Q9H2G4 693 aaPredicted RBP12.47□□□□□ -0.41
ATM-208ENST00000525537 ZBTB47Q9UFB7 747 aaPredicted RBP12.47□□□□□ -0.41
ATM-208ENST00000525537 CIZ1Q9ULV3 898 aaPredicted RBP12.47□□□□□ -0.41
ATM-208ENST00000525537 DNAJC5Q9H3Z4 198 aa12.46□□□□□ -0.41
ATM-208ENST00000525537 TRIM41Q8WV44 630 aa12.44□□□□□ -0.42
ATM-208ENST00000525537 BMP2KQ9NSY1 1161 aaPredicted RBP12.44□□□□□ -0.42
ATM-208ENST00000525537 PLEKHG5O94827 1062 aa12.43□□□□□ -0.42
ATM-208ENST00000525537 KIF12Q96FN5 646 aa12.43□□□□□ -0.42
ATM-208ENST00000525537 TRPC6Q9Y210 931 aa12.41□□□□□ -0.42
ATM-208ENST00000525537 HS6ST3Q8IZP7 471 aa12.4□□□□□ -0.42
ATM-208ENST00000525537 NBR1Q14596 966 aa12.39□□□□□ -0.43
ATM-208ENST00000525537 CDAN1Q8IWY9 1227 aa12.37□□□□□ -0.43
ATM-208ENST00000525537 TIE1P35590 1138 aa12.35□□□□□ -0.43
ATM-208ENST00000525537 COLQQ9Y215 455 aaPredicted RBP12.34□□□□□ -0.43
ATM-208ENST00000525537 MAP3K13O43283 966 aa12.32□□□□□ -0.44
ATM-208ENST00000525537 SEC24BO95487 1268 aa12.28□□□□□ -0.44
ATM-208ENST00000525537 TTLL13PA6NNM8 815 aa12.27□□□□□ -0.45
ATM-208ENST00000525537 GSE1Q14687 1217 aa12.27□□□□□ -0.45
ATM-208ENST00000525537 RNF25Q96BH1 459 aaPredicted RBP12.27□□□□□ -0.45
ATM-208ENST00000525537 IER5LQ5T953 404 aa12.22□□□□□ -0.45
ATM-208ENST00000525537 RASEFQ8IZ41 740 aa12.22□□□□□ -0.45
ATM-208ENST00000525537 ST18O60284 1047 aa12.21□□□□□ -0.45
ATM-208ENST00000525537 NKX1-1Q15270 411 aaPredicted RBP12.2□□□□□ -0.46
ATM-208ENST00000525537 TRIM35Q9UPQ4 493 aa12.2□□□□□ -0.46
ATM-208ENST00000525537 SLAIN1Q8ND83 568 aa12.18□□□□□ -0.46
ATM-208ENST00000525537 RIOK3O14730 519 aaKnown RBP12.17□□□□□ -0.46
ATM-208ENST00000525537 GTPBP6O43824 516 aaPredicted RBP12.17□□□□□ -0.46
ATM-208ENST00000525537 NUBP1P53384 320 aa12.17□□□□□ -0.46
ATM-208ENST00000525537 MMRN1Q13201 1228 aa12.13□□□□□ -0.47
ATM-208ENST00000525537 SGIP1Q9BQI5 828 aa12.13□□□□□ -0.47
ATM-208ENST00000525537 DCAF8Q5TAQ9 597 aa12.11□□□□□ -0.47
ATM-208ENST00000525537 SPNS2Q8IVW8 549 aa12.1□□□□□ -0.47
ATM-208ENST00000525537 PCDHB13Q9Y5F0 798 aa12.1□□□□□ -0.47
ATM-208ENST00000525537 VGFO15240 615 aaPredicted RBP12.09□□□□□ -0.47
ATM-208ENST00000525537 TIMELESSQ9UNS1 1208 aa12.09□□□□□ -0.47
ATM-208ENST00000525537 STK25O00506 426 aa12.08□□□□□ -0.48
ATM-208ENST00000525537 TULP1O00294 542 aaPredicted RBP12.05□□□□□ -0.48
ATM-208ENST00000525537 GTF3C3Q9Y5Q9 886 aa12.05□□□□□ -0.48
ATM-208ENST00000525537 FAM212AQ96EL1 285 aa12.04□□□□□ -0.48
ATM-208ENST00000525537 RYDENQ9NUL5 291 aaKnown RBP12.04□□□□□ -0.48
ATM-208ENST00000525537 CHRM1P11229 460 aaPredicted RBP12.03□□□□□ -0.48
ATM-208ENST00000525537 PLCG2P16885 1265 aa12.03□□□□□ -0.48
ATM-208ENST00000525537 IFNL1Q8IU54 200 aa12.03□□□□□ -0.48
ATM-208ENST00000525537 TMEM121BQ9BXQ6 578 aaPredicted RBP12.03□□□□□ -0.48
ATM-208ENST00000525537 TMEM106CQ9BVX2 250 aa12.01□□□□□ -0.49
ATM-208ENST00000525537 IRX5P78411 483 aaPredicted RBP12□□□□□ -0.49
ATM-208ENST00000525537 ERICH6Q7L0X2 663 aa12□□□□□ -0.49
ATM-208ENST00000525537 TMEM132AQ24JP5 1023 aa11.96□□□□□ -0.49
ATM-208ENST00000525537 P3H3Q8IVL6 736 aa11.96□□□□□ -0.49
ATM-208ENST00000525537 BCL11BQ9C0K0 894 aaPredicted RBP11.96□□□□□ -0.49
ATM-208ENST00000525537 STK24Q9Y6E0 443 aa11.96□□□□□ -0.49
ATM-208ENST00000525537 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.94□□□□□ -0.5
ATM-208ENST00000525537 SNPHO15079 494 aa11.94□□□□□ -0.5
ATM-208ENST00000525537 MARVELD3Q96A59 401 aa11.94□□□□□ -0.5
ATM-208ENST00000525537 ZFP91Q96JP5 570 aaPredicted RBP11.94□□□□□ -0.5
ATM-208ENST00000525537 OCEL1Q9H607 264 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms