RNA–Protein interactions for RNA: ENST00000525222.1

ARHGEF12-203, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 5

Gene ARHGEF12, Length 2,795 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-203ENST00000525222 MIER1Q8N108 512 aa13.72□□□□□ -0.21
ARHGEF12-203ENST00000525222 CENPBP07199 599 aaPredicted RBP13.7□□□□□ -0.22
ARHGEF12-203ENST00000525222 YTHDC1Q96MU7 727 aaKnown RBP13.7□□□□□ -0.22
ARHGEF12-203ENST00000525222 TIAM1Q13009 1591 aa13.69□□□□□ -0.22
ARHGEF12-203ENST00000525222 POLA1P09884 1462 aaPredicted RBP13.69□□□□□ -0.22
ARHGEF12-203ENST00000525222 DNMBPQ6XZF7 1577 aa13.68□□□□□ -0.22
ARHGEF12-203ENST00000525222 TOPBP1Q92547 1522 aa13.68□□□□□ -0.22
ARHGEF12-203ENST00000525222 GTF3C3Q9Y5Q9 886 aa13.68□□□□□ -0.22
ARHGEF12-203ENST00000525222 CLSPNQ9HAW4 1339 aa13.66□□□□□ -0.22
ARHGEF12-203ENST00000525222 ABCA10Q8WWZ4 1543 aa13.65□□□□□ -0.22
ARHGEF12-203ENST00000525222 ATP1B4Q9UN42 357 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF12-203ENST00000525222 LRRC9Q6ZRR7 1453 aa13.64□□□□□ -0.23
ARHGEF12-203ENST00000525222 DNAJC5BQ9UF47 199 aa13.64□□□□□ -0.23
ARHGEF12-203ENST00000525222 FHOD3Q2V2M9 1422 aa13.64□□□□□ -0.23
ARHGEF12-203ENST00000525222 PHLDB1Q86UU1 1377 aa13.63□□□□□ -0.23
ARHGEF12-203ENST00000525222 PCF11O94913 1555 aaKnown RBP13.63□□□□□ -0.23
ARHGEF12-203ENST00000525222 MAP3K1Q13233 1512 aa13.62□□□□□ -0.23
ARHGEF12-203ENST00000525222 RAB3GAP2Q9H2M9 1393 aa13.61□□□□□ -0.23
ARHGEF12-203ENST00000525222 URB2Q14146 1524 aaKnown RBP13.6□□□□□ -0.23
ARHGEF12-203ENST00000525222 FHAD1B1AJZ9 1412 aa13.6□□□□□ -0.23
ARHGEF12-203ENST00000525222 FAM50AQ14320 339 aaKnown RBP13.59□□□□□ -0.23
ARHGEF12-203ENST00000525222 TDRD9Q8NDG6 1382 aaKnown RBP13.57□□□□□ -0.24
ARHGEF12-203ENST00000525222 CFAP43Q8NDM7 1665 aa13.57□□□□□ -0.24
ARHGEF12-203ENST00000525222 CUL7Q14999 1698 aa13.55□□□□□ -0.24
ARHGEF12-203ENST00000525222 MAPKBP1O60336 1514 aa13.55□□□□□ -0.24
ARHGEF12-203ENST00000525222 LAMC3Q9Y6N6 1575 aa13.55□□□□□ -0.24
ARHGEF12-203ENST00000525222 CTTNBP2Q8WZ74 1663 aa13.54□□□□□ -0.24
ARHGEF12-203ENST00000525222 SETD5Q9C0A6 1442 aa13.53□□□□□ -0.24
ARHGEF12-203ENST00000525222 WDR97A6NE52 1622 aa13.53□□□□□ -0.24
ARHGEF12-203ENST00000525222 EFCAB5A4FU69 1503 aa13.53□□□□□ -0.24
ARHGEF12-203ENST00000525222 FYCO1Q9BQS8 1478 aa13.52□□□□□ -0.24
ARHGEF12-203ENST00000525222 CASKIN1Q8WXD9 1431 aa13.52□□□□□ -0.24
ARHGEF12-203ENST00000525222 KCNA4P22459 653 aa13.51□□□□□ -0.25
ARHGEF12-203ENST00000525222 ABCA5Q8WWZ7 1642 aa13.49□□□□□ -0.25
ARHGEF12-203ENST00000525222 GAPVD1Q14C86 1478 aa13.49□□□□□ -0.25
ARHGEF12-203ENST00000525222 SIN3AQ96ST3 1273 aa13.49□□□□□ -0.25
ARHGEF12-203ENST00000525222 AQRO60306 1485 aaKnown RBP eCLIP13.48□□□□□ -0.252e-8■■■■□ 25
ARHGEF12-203ENST00000525222 SNAPC4Q5SXM2 1469 aa13.48□□□□□ -0.25
ARHGEF12-203ENST00000525222 KIF21AQ7Z4S6 1674 aa13.48□□□□□ -0.25
ARHGEF12-203ENST00000525222 PDS5BQ9NTI5 1447 aa13.47□□□□□ -0.25
ARHGEF12-203ENST00000525222 FMN1Q68DA7 1419 aa13.46□□□□□ -0.25
ARHGEF12-203ENST00000525222 LRRIQ1Q96JM4 1722 aa13.44□□□□□ -0.26
ARHGEF12-203ENST00000525222 SAMD9Q5K651 1589 aa13.43□□□□□ -0.26
ARHGEF12-203ENST00000525222 PELP1Q8IZL8 1130 aaKnown RBP13.43□□□□□ -0.26
ARHGEF12-203ENST00000525222 MTUS2Q5JR59 1369 aa13.42□□□□□ -0.26
ARHGEF12-203ENST00000525222 FGD6Q6ZV73 1430 aa13.42□□□□□ -0.26
ARHGEF12-203ENST00000525222 TARBP1Q13395 1621 aaKnown RBP13.41□□□□□ -0.26
ARHGEF12-203ENST00000525222 PTPRKQ15262 1439 aa13.4□□□□□ -0.26
ARHGEF12-203ENST00000525222 GRIN2BQ13224 1484 aa13.39□□□□□ -0.27
ARHGEF12-203ENST00000525222 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.38□□□□□ -0.27
ARHGEF12-203ENST00000525222 PIAS4Q8N2W9 510 aaPredicted RBP13.37□□□□□ -0.27
ARHGEF12-203ENST00000525222 NCOA2Q15596 1464 aa13.37□□□□□ -0.27
ARHGEF12-203ENST00000525222 KCNH8Q96L42 1107 aa13.36□□□□□ -0.27
ARHGEF12-203ENST00000525222 HIRIP3Q9BW71 556 aaPredicted RBP13.35□□□□□ -0.27
ARHGEF12-203ENST00000525222 MAGI3Q5TCQ9 1506 aa13.35□□□□□ -0.27
ARHGEF12-203ENST00000525222 CCDC18Q5T9S5 1454 aa13.34□□□□□ -0.27
ARHGEF12-203ENST00000525222 MYOM3Q5VTT5 1437 aa13.34□□□□□ -0.27
ARHGEF12-203ENST00000525222 PBRM1Q86U86 1689 aa13.33□□□□□ -0.28
ARHGEF12-203ENST00000525222 ARID3CA6NKF2 412 aa13.33□□□□□ -0.28
ARHGEF12-203ENST00000525222 DDX10Q13206 875 aaKnown RBP13.32□□□□□ -0.28
ARHGEF12-203ENST00000525222 HFM1A2PYH4 1435 aa13.31□□□□□ -0.28
ARHGEF12-203ENST00000525222 SUPT6HQ7KZ85 1726 aaKnown RBP13.31□□□□□ -0.28
ARHGEF12-203ENST00000525222 PTPN23Q9H3S7 1636 aa13.31□□□□□ -0.28
ARHGEF12-203ENST00000525222 PPP1R15AO75807 674 aaPredicted RBP13.31□□□□□ -0.28
ARHGEF12-203ENST00000525222 EHBP1L1Q8N3D4 1523 aa13.3□□□□□ -0.28
ARHGEF12-203ENST00000525222 THOC2Q8NI27 1593 aaKnown RBP13.3□□□□□ -0.28
ARHGEF12-203ENST00000525222 NAIPQ13075 1403 aa13.29□□□□□ -0.28
ARHGEF12-203ENST00000525222 ADAMTS12P58397 1594 aa13.29□□□□□ -0.28
ARHGEF12-203ENST00000525222 UGGT2Q9NYU1 1516 aa13.29□□□□□ -0.28
ARHGEF12-203ENST00000525222 IQGAP2Q13576 1575 aa13.29□□□□□ -0.28
ARHGEF12-203ENST00000525222 MRC2Q9UBG0 1479 aa13.28□□□□□ -0.28
ARHGEF12-203ENST00000525222 CHIC2Q9UKJ5 165 aa13.28□□□□□ -0.28
ARHGEF12-203ENST00000525222 ZNF608Q9ULD9 1512 aaPredicted RBP13.28□□□□□ -0.28
ARHGEF12-203ENST00000525222 UACAQ9BZF9 1416 aa13.27□□□□□ -0.28
ARHGEF12-203ENST00000525222 TIMELESSQ9UNS1 1208 aa13.27□□□□□ -0.28
ARHGEF12-203ENST00000525222 CDK13Q14004 1512 aaKnown RBP13.27□□□□□ -0.28
ARHGEF12-203ENST00000525222 PPP4R3CPQ6ZMV5 832 aa13.27□□□□□ -0.29
ARHGEF12-203ENST00000525222 RRP7BPQ9NSQ0 103 aa13.27□□□□□ -0.29
ARHGEF12-203ENST00000525222 ARHGEF11O15085 1522 aa13.27□□□□□ -0.29
ARHGEF12-203ENST00000525222 EPRSP07814 1512 aaKnown RBP13.25□□□□□ -0.29
ARHGEF12-203ENST00000525222 TONSLQ96HA7 1378 aa13.25□□□□□ -0.29
ARHGEF12-203ENST00000525222 HECW1Q76N89 1606 aa13.24□□□□□ -0.29
ARHGEF12-203ENST00000525222 WDR62O43379 1518 aa13.21□□□□□ -0.29
ARHGEF12-203ENST00000525222 KDM6BO15054 1643 aa13.21□□□□□ -0.3
ARHGEF12-203ENST00000525222 TCOF1Q13428 1488 aaKnown RBP13.2□□□□□ -0.3
ARHGEF12-203ENST00000525222 SUPT16HQ9Y5B9 1047 aaKnown RBP13.2□□□□□ -0.3
ARHGEF12-203ENST00000525222 DENND4BO75064 1496 aaPredicted RBP13.19□□□□□ -0.3
ARHGEF12-203ENST00000525222 IFT140Q96RY7 1462 aa13.18□□□□□ -0.3
ARHGEF12-203ENST00000525222 KDM5BQ9UGL1 1544 aa13.18□□□□□ -0.3
ARHGEF12-203ENST00000525222 TRIM52Q96A61 297 aa13.18□□□□□ -0.3
ARHGEF12-203ENST00000525222 DISP1Q96F81 1524 aa13.17□□□□□ -0.3
ARHGEF12-203ENST00000525222 GCC2Q8IWJ2 1684 aa13.15□□□□□ -0.3
ARHGEF12-203ENST00000525222 ZNF644Q9H582 1327 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF12-203ENST00000525222 KIAA0556O60303 1618 aa13.15□□□□□ -0.3
ARHGEF12-203ENST00000525222 KIAA0586Q9BVV6 1533 aa13.15□□□□□ -0.31
ARHGEF12-203ENST00000525222 MIA2Q96PC5 1412 aa13.14□□□□□ -0.31
ARHGEF12-203ENST00000525222 EIF4G3O43432 1585 aaKnown RBP13.14□□□□□ -0.31
ARHGEF12-203ENST00000525222 NCBP3Q53F19 620 aaKnown RBP13.14□□□□□ -0.31
ARHGEF12-203ENST00000525222 NUP153P49790 1475 aaKnown RBP13.13□□□□□ -0.31
ARHGEF12-203ENST00000525222 GRIN2AQ12879 1464 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms