RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 TOPBP1Q92547 1522 aa13.23□□□□□ -0.29
PKP3-202ENST00000524646 CARMIL1Q5VZK9 1371 aa13.22□□□□□ -0.29
PKP3-202ENST00000524646 LAMC3Q9Y6N6 1575 aa13.22□□□□□ -0.29
PKP3-202ENST00000524646 FHAD1B1AJZ9 1412 aa13.22□□□□□ -0.29
PKP3-202ENST00000524646 ABCA5Q8WWZ7 1642 aa13.21□□□□□ -0.29
PKP3-202ENST00000524646 KANK4Q5T7N3 995 aaPredicted RBP13.21□□□□□ -0.29
PKP3-202ENST00000524646 LRRC9Q6ZRR7 1453 aa13.21□□□□□ -0.3
PKP3-202ENST00000524646 FYCO1Q9BQS8 1478 aa13.21□□□□□ -0.3
PKP3-202ENST00000524646 POLA1P09884 1462 aaPredicted RBP13.2□□□□□ -0.3
PKP3-202ENST00000524646 AQRO60306 1485 aaKnown RBP eCLIP13.18□□□□□ -0.36e-7■■□□□ 13.8
PKP3-202ENST00000524646 SAMD9Q5K651 1589 aa13.16□□□□□ -0.3
PKP3-202ENST00000524646 MAPKBP1O60336 1514 aa13.16□□□□□ -0.3
PKP3-202ENST00000524646 LRRIQ1Q96JM4 1722 aa13.14□□□□□ -0.31
PKP3-202ENST00000524646 RAD54L2Q9Y4B4 1467 aa13.14□□□□□ -0.31
PKP3-202ENST00000524646 THOC2Q8NI27 1593 aaKnown RBP13.14□□□□□ -0.31
PKP3-202ENST00000524646 NESP48681 1621 aa13.12□□□□□ -0.31
PKP3-202ENST00000524646 CASKIN1Q8WXD9 1431 aa13.12□□□□□ -0.31
PKP3-202ENST00000524646 URB2Q14146 1524 aaKnown RBP13.11□□□□□ -0.31
PKP3-202ENST00000524646 PBRM1Q86U86 1689 aa13.11□□□□□ -0.31
PKP3-202ENST00000524646 GTF3C3Q9Y5Q9 886 aa13.1□□□□□ -0.31
PKP3-202ENST00000524646 SNAPC4Q5SXM2 1469 aa13.1□□□□□ -0.31
PKP3-202ENST00000524646 RAB3GAP2Q9H2M9 1393 aa13.09□□□□□ -0.31
PKP3-202ENST00000524646 FHOD3Q2V2M9 1422 aa13.09□□□□□ -0.31
PKP3-202ENST00000524646 PHLDB1Q86UU1 1377 aa13.08□□□□□ -0.31
PKP3-202ENST00000524646 MIER1Q8N108 512 aa13.08□□□□□ -0.32
PKP3-202ENST00000524646 SETD5Q9C0A6 1442 aa13.06□□□□□ -0.32
PKP3-202ENST00000524646 SUPT6HQ7KZ85 1726 aaKnown RBP13.05□□□□□ -0.32
PKP3-202ENST00000524646 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.05□□□□□ -0.32
PKP3-202ENST00000524646 FMN1Q68DA7 1419 aa13.05□□□□□ -0.32
PKP3-202ENST00000524646 EHBP1L1Q8N3D4 1523 aa13.04□□□□□ -0.32
PKP3-202ENST00000524646 TARBP1Q13395 1621 aaKnown RBP13.04□□□□□ -0.32
PKP3-202ENST00000524646 GCC2Q8IWJ2 1684 aa13.02□□□□□ -0.33
PKP3-202ENST00000524646 YTHDC1Q96MU7 727 aaKnown RBP13.01□□□□□ -0.33
PKP3-202ENST00000524646 GRIN2BQ13224 1484 aa13.01□□□□□ -0.33
PKP3-202ENST00000524646 HECW1Q76N89 1606 aa13□□□□□ -0.33
PKP3-202ENST00000524646 PTPN23Q9H3S7 1636 aa13□□□□□ -0.33
PKP3-202ENST00000524646 ADAMTS12P58397 1594 aa13□□□□□ -0.33
PKP3-202ENST00000524646 GAPVD1Q14C86 1478 aa13□□□□□ -0.33
PKP3-202ENST00000524646 FGD6Q6ZV73 1430 aa12.99□□□□□ -0.33
PKP3-202ENST00000524646 PDS5BQ9NTI5 1447 aa12.97□□□□□ -0.33
PKP3-202ENST00000524646 ARHGEF11O15085 1522 aa12.95□□□□□ -0.34
PKP3-202ENST00000524646 UGGT2Q9NYU1 1516 aa12.95□□□□□ -0.34
PKP3-202ENST00000524646 ITGAEP38570 1179 aa12.95□□□□□ -0.34
PKP3-202ENST00000524646 CCDC18Q5T9S5 1454 aa12.95□□□□□ -0.34
PKP3-202ENST00000524646 IQGAP2Q13576 1575 aa12.94□□□□□ -0.34
PKP3-202ENST00000524646 NCOA2Q15596 1464 aa12.93□□□□□ -0.34
PKP3-202ENST00000524646 MYOM3Q5VTT5 1437 aa12.92□□□□□ -0.34
PKP3-202ENST00000524646 HFM1A2PYH4 1435 aa12.91□□□□□ -0.34
PKP3-202ENST00000524646 FAM50AQ14320 339 aaKnown RBP12.91□□□□□ -0.34
PKP3-202ENST00000524646 WDR62O43379 1518 aa12.9□□□□□ -0.34
PKP3-202ENST00000524646 P3H3Q8IVL6 736 aa12.9□□□□□ -0.34
PKP3-202ENST00000524646 MTUS2Q5JR59 1369 aa12.9□□□□□ -0.34
PKP3-202ENST00000524646 MAGI3Q5TCQ9 1506 aa12.89□□□□□ -0.35
PKP3-202ENST00000524646 TCOF1Q13428 1488 aaKnown RBP12.89□□□□□ -0.35
PKP3-202ENST00000524646 TDRD9Q8NDG6 1382 aaKnown RBP12.88□□□□□ -0.35
PKP3-202ENST00000524646 MRC2Q9UBG0 1479 aa12.87□□□□□ -0.35
PKP3-202ENST00000524646 UACAQ9BZF9 1416 aa12.87□□□□□ -0.35
PKP3-202ENST00000524646 TIMELESSQ9UNS1 1208 aa12.86□□□□□ -0.35
PKP3-202ENST00000524646 AKNAQ7Z591 1439 aa12.86□□□□□ -0.35
PKP3-202ENST00000524646 NAIPQ13075 1403 aa12.83□□□□□ -0.36
PKP3-202ENST00000524646 PTPRKQ15262 1439 aa12.83□□□□□ -0.36
PKP3-202ENST00000524646 ATP1B4Q9UN42 357 aaPredicted RBP12.83□□□□□ -0.36
PKP3-202ENST00000524646 KIAA0556O60303 1618 aa12.83□□□□□ -0.36
PKP3-202ENST00000524646 EPRSP07814 1512 aaKnown RBP12.82□□□□□ -0.36
PKP3-202ENST00000524646 KDM5BQ9UGL1 1544 aa12.81□□□□□ -0.36
PKP3-202ENST00000524646 CDK13Q14004 1512 aaKnown RBP12.79□□□□□ -0.36
PKP3-202ENST00000524646 EIF4G3O43432 1585 aaKnown RBP12.79□□□□□ -0.36
PKP3-202ENST00000524646 DNMT1P26358 1616 aaKnown RBP12.79□□□□□ -0.36
PKP3-202ENST00000524646 ADGBQ8N7X0 1667 aa12.79□□□□□ -0.36
PKP3-202ENST00000524646 ITSN2Q9NZM3 1697 aa12.79□□□□□ -0.36
PKP3-202ENST00000524646 IFT140Q96RY7 1462 aa12.78□□□□□ -0.36
PKP3-202ENST00000524646 RAPGEF6Q8TEU7 1601 aa12.78□□□□□ -0.36
PKP3-202ENST00000524646 POLR1AO95602 1720 aaPredicted RBP12.77□□□□□ -0.36
PKP3-202ENST00000524646 SIN3AQ96ST3 1273 aa12.77□□□□□ -0.37
PKP3-202ENST00000524646 TONSLQ96HA7 1378 aa12.77□□□□□ -0.37
PKP3-202ENST00000524646 MIA2Q96PC5 1412 aa12.77□□□□□ -0.37
PKP3-202ENST00000524646 KDM6BO15054 1643 aa12.77□□□□□ -0.37
PKP3-202ENST00000524646 CROCC2H7BZ55 1655 aa12.77□□□□□ -0.37
PKP3-202ENST00000524646 ADCY10Q96PN6 1610 aa12.76□□□□□ -0.37
PKP3-202ENST00000524646 PPP1R15AO75807 674 aaPredicted RBP12.72□□□□□ -0.37
PKP3-202ENST00000524646 DISP1Q96F81 1524 aa12.71□□□□□ -0.38
PKP3-202ENST00000524646 KIAA0586Q9BVV6 1533 aa12.71□□□□□ -0.38
PKP3-202ENST00000524646 DENND4BO75064 1496 aaPredicted RBP12.71□□□□□ -0.38
PKP3-202ENST00000524646 GRIN2AQ12879 1464 aa12.7□□□□□ -0.38
PKP3-202ENST00000524646 SUPT16HQ9Y5B9 1047 aaKnown RBP12.69□□□□□ -0.38
PKP3-202ENST00000524646 ZNF608Q9ULD9 1512 aaPredicted RBP12.68□□□□□ -0.38
PKP3-202ENST00000524646 NUP153P49790 1475 aaKnown RBP12.68□□□□□ -0.38
PKP3-202ENST00000524646 DAPK1P53355 1430 aa12.67□□□□□ -0.38
PKP3-202ENST00000524646 MAGI1Q96QZ7 1491 aaPredicted RBP12.66□□□□□ -0.38
PKP3-202ENST00000524646 CEP170Q5SW79 1584 aa12.66□□□□□ -0.38
PKP3-202ENST00000524646 CCER2I3L3R5 266 aa12.66□□□□□ -0.38
PKP3-202ENST00000524646 ROCK1Q13464 1354 aa12.66□□□□□ -0.38
PKP3-202ENST00000524646 DDX10Q13206 875 aaKnown RBP12.65□□□□□ -0.38
PKP3-202ENST00000524646 DNAJC5BQ9UF47 199 aa12.64□□□□□ -0.39
PKP3-202ENST00000524646 TEX14Q8IWB6 1497 aa12.63□□□□□ -0.39
PKP3-202ENST00000524646 KIF14Q15058 1648 aa12.62□□□□□ -0.39
PKP3-202ENST00000524646 CDC42BPAQ5VT25 1732 aa12.62□□□□□ -0.39
PKP3-202ENST00000524646 CAMSAP2Q08AD1 1489 aa12.61□□□□□ -0.39
PKP3-202ENST00000524646 MYT1Q01538 1121 aa12.61□□□□□ -0.39
PKP3-202ENST00000524646 KCNH8Q96L42 1107 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms