RNA–Protein interactions for RNA: ENST00000524543.5

TMEM41B-202, Transcript of transmembrane protein 41B, humanhuman

TSL 2

Gene TMEM41B, Length 3,848 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-202ENST00000524543 NESP48681 1621 aa16.73■□□□□ 0.27
TMEM41B-202ENST00000524543 KCNH8Q96L42 1107 aa16.73■□□□□ 0.27
TMEM41B-202ENST00000524543 VPS8Q8N3P4 1428 aa16.73■□□□□ 0.27
TMEM41B-202ENST00000524543 CLIP1P30622 1438 aa16.72■□□□□ 0.27
TMEM41B-202ENST00000524543 IGF1RP08069 1367 aa16.7■□□□□ 0.26
TMEM41B-202ENST00000524543 POLA1P09884 1462 aaPredicted RBP16.7■□□□□ 0.26
TMEM41B-202ENST00000524543 ARAP1Q96P48 1450 aa16.7■□□□□ 0.26
TMEM41B-202ENST00000524543 URB2Q14146 1524 aaKnown RBP16.7■□□□□ 0.26
TMEM41B-202ENST00000524543 KIF21AQ7Z4S6 1674 aa16.7■□□□□ 0.26
TMEM41B-202ENST00000524543 ABCA5Q8WWZ7 1642 aa16.69■□□□□ 0.26
TMEM41B-202ENST00000524543 CUL7Q14999 1698 aa16.68■□□□□ 0.26
TMEM41B-202ENST00000524543 CUX2O14529 1486 aa16.66■□□□□ 0.26
TMEM41B-202ENST00000524543 RANGAP1P46060 587 aaPredicted RBP16.64■□□□□ 0.25
TMEM41B-202ENST00000524543 MSH5O43196 834 aa16.64■□□□□ 0.25
TMEM41B-202ENST00000524543 TARBP1Q13395 1621 aaKnown RBP16.62■□□□□ 0.25
TMEM41B-202ENST00000524543 PDS5BQ9NTI5 1447 aa16.59■□□□□ 0.25
TMEM41B-202ENST00000524543 ARHGAP35Q9NRY4 1499 aa16.59■□□□□ 0.25
TMEM41B-202ENST00000524543 CTTNBP2Q8WZ74 1663 aa16.57■□□□□ 0.24
TMEM41B-202ENST00000524543 TRIM52Q96A61 297 aa16.57■□□□□ 0.24
TMEM41B-202ENST00000524543 MAP3K1Q13233 1512 aa16.56■□□□□ 0.24
TMEM41B-202ENST00000524543 RAD54L2Q9Y4B4 1467 aa16.56■□□□□ 0.24
TMEM41B-202ENST00000524543 DHX57Q6P158 1386 aaKnown RBP16.55■□□□□ 0.24
TMEM41B-202ENST00000524543 CDK11AQ9UQ88 783 aaPredicted RBP16.54■□□□□ 0.24
TMEM41B-202ENST00000524543 DDX10Q13206 875 aaKnown RBP16.54■□□□□ 0.24
TMEM41B-202ENST00000524543 CARMIL1Q5VZK9 1371 aa16.53■□□□□ 0.24
TMEM41B-202ENST00000524543 DEKP35659 375 aaKnown RBP16.52■□□□□ 0.24
TMEM41B-202ENST00000524543 DNAJC5BQ9UF47 199 aa16.51■□□□□ 0.23
TMEM41B-202ENST00000524543 MYT1LQ9UL68 1186 aa16.51■□□□□ 0.23
TMEM41B-202ENST00000524543 WDR62O43379 1518 aa16.48■□□□□ 0.23
TMEM41B-202ENST00000524543 FANCIQ9NVI1 1328 aa16.48■□□□□ 0.23
TMEM41B-202ENST00000524543 EFCAB5A4FU69 1503 aa16.48■□□□□ 0.23
TMEM41B-202ENST00000524543 PBRM1Q86U86 1689 aa16.48■□□□□ 0.23
TMEM41B-202ENST00000524543 CFAP43Q8NDM7 1665 aa16.47■□□□□ 0.23
TMEM41B-202ENST00000524543 SAMD9Q5K651 1589 aa16.46■□□□□ 0.23
TMEM41B-202ENST00000524543 MRC2Q9UBG0 1479 aa16.45■□□□□ 0.22
TMEM41B-202ENST00000524543 IRX6P78412 446 aaPredicted RBP16.43■□□□□ 0.22
TMEM41B-202ENST00000524543 ANO8Q9HCE9 1232 aaPredicted RBP16.42■□□□□ 0.22
TMEM41B-202ENST00000524543 AQRO60306 1485 aaKnown RBP eCLIP16.42■□□□□ 0.22
TMEM41B-202ENST00000524543 TIAM1Q13009 1591 aa16.41■□□□□ 0.22
TMEM41B-202ENST00000524543 GAPVD1Q14C86 1478 aa16.4■□□□□ 0.22
TMEM41B-202ENST00000524543 ANP32CO43423 234 aa16.4■□□□□ 0.22
TMEM41B-202ENST00000524543 NBR1Q14596 966 aa16.39■□□□□ 0.21
TMEM41B-202ENST00000524543 RRBP1Q9P2E9 1410 aaKnown RBP16.39■□□□□ 0.21
TMEM41B-202ENST00000524543 THOC2Q8NI27 1593 aaKnown RBP16.38■□□□□ 0.21
TMEM41B-202ENST00000524543 ADAMTS12P58397 1594 aa16.38■□□□□ 0.21
TMEM41B-202ENST00000524543 PCF11O94913 1555 aaKnown RBP16.35■□□□□ 0.21
TMEM41B-202ENST00000524543 HIRIP3Q9BW71 556 aaPredicted RBP16.34■□□□□ 0.21
TMEM41B-202ENST00000524543 FYCO1Q9BQS8 1478 aa16.33■□□□□ 0.2
TMEM41B-202ENST00000524543 LRRIQ1Q96JM4 1722 aa16.32■□□□□ 0.2
TMEM41B-202ENST00000524543 SNAPC4Q5SXM2 1469 aa16.31■□□□□ 0.2
TMEM41B-202ENST00000524543 IFT140Q96RY7 1462 aa16.31■□□□□ 0.2
TMEM41B-202ENST00000524543 FHAD1B1AJZ9 1412 aa16.3■□□□□ 0.2
TMEM41B-202ENST00000524543 CCER2I3L3R5 266 aa16.29■□□□□ 0.2
TMEM41B-202ENST00000524543 HNRNPUQ00839 825 aaKnown RBP eCLIP16.28■□□□□ 0.2
TMEM41B-202ENST00000524543 CASKIN1Q8WXD9 1431 aa16.28■□□□□ 0.2
TMEM41B-202ENST00000524543 LRRC9Q6ZRR7 1453 aa16.27■□□□□ 0.19
TMEM41B-202ENST00000524543 RTL5Q5HYW3 569 aaPredicted RBP16.26■□□□□ 0.19
TMEM41B-202ENST00000524543 SALL2Q9Y467 1007 aaPredicted RBP16.26■□□□□ 0.19
TMEM41B-202ENST00000524543 NOP58Q9Y2X3 529 aaKnown RBP16.25■□□□□ 0.19
TMEM41B-202ENST00000524543 TDRD9Q8NDG6 1382 aaKnown RBP16.25■□□□□ 0.19
TMEM41B-202ENST00000524543 KANK4Q5T7N3 995 aaPredicted RBP16.25■□□□□ 0.19
TMEM41B-202ENST00000524543 GRIN2BQ13224 1484 aa16.24■□□□□ 0.19
TMEM41B-202ENST00000524543 PPP1R15AO75807 674 aaPredicted RBP16.24■□□□□ 0.19
TMEM41B-202ENST00000524543 EIF4G3O43432 1585 aaKnown RBP16.23■□□□□ 0.19
TMEM41B-202ENST00000524543 CCDC136Q96JN2 1154 aa16.23■□□□□ 0.19
TMEM41B-202ENST00000524543 SIN3AQ96ST3 1273 aa16.21■□□□□ 0.19
TMEM41B-202ENST00000524543 UGGT2Q9NYU1 1516 aa16.21■□□□□ 0.19
TMEM41B-202ENST00000524543 RTN4Q9NQC3 1192 aaKnown RBP16.21■□□□□ 0.18
TMEM41B-202ENST00000524543 PPP4R2Q9NY27 417 aa16.2■□□□□ 0.18
TMEM41B-202ENST00000524543 ERICH6BQ5W0A0 696 aa16.19■□□□□ 0.18
TMEM41B-202ENST00000524543 IQGAP2Q13576 1575 aa16.19■□□□□ 0.18
TMEM41B-202ENST00000524543 FMN1Q68DA7 1419 aa16.19■□□□□ 0.18
TMEM41B-202ENST00000524543 FHOD3Q2V2M9 1422 aa16.17■□□□□ 0.18
TMEM41B-202ENST00000524543 B4GALNT3Q6L9W6 998 aa16.17■□□□□ 0.18
TMEM41B-202ENST00000524543 ARHGEF11O15085 1522 aa16.17■□□□□ 0.18
TMEM41B-202ENST00000524543 ZNF608Q9ULD9 1512 aaPredicted RBP16.17■□□□□ 0.18
TMEM41B-202ENST00000524543 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.16■□□□□ 0.186e-6■□□□□ 11
TMEM41B-202ENST00000524543 PAK3O75914 559 aaPredicted RBP16.16■□□□□ 0.18
TMEM41B-202ENST00000524543 CCNB3Q8WWL7 1395 aa16.14■□□□□ 0.17
TMEM41B-202ENST00000524543 RAB3GAP2Q9H2M9 1393 aa16.14■□□□□ 0.17
TMEM41B-202ENST00000524543 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.13■□□□□ 0.17
TMEM41B-202ENST00000524543 MAGI1Q96QZ7 1491 aaPredicted RBP16.12■□□□□ 0.17
TMEM41B-202ENST00000524543 IL27Q8NEV9 243 aa16.12■□□□□ 0.17
TMEM41B-202ENST00000524543 ANP32AP39687 249 aaKnown RBP16.11■□□□□ 0.17
TMEM41B-202ENST00000524543 KIAA0556O60303 1618 aa16.08■□□□□ 0.17
TMEM41B-202ENST00000524543 PHLDB1Q86UU1 1377 aa16.08■□□□□ 0.17
TMEM41B-202ENST00000524543 KIAA0586Q9BVV6 1533 aa16.08■□□□□ 0.16
TMEM41B-202ENST00000524543 ZBTB47Q9UFB7 747 aaPredicted RBP16.08■□□□□ 0.16
TMEM41B-202ENST00000524543 GRIN2AQ12879 1464 aa16.08■□□□□ 0.16
TMEM41B-202ENST00000524543 HECW1Q76N89 1606 aa16.08■□□□□ 0.16
TMEM41B-202ENST00000524543 DISP1Q96F81 1524 aa16.07■□□□□ 0.16
TMEM41B-202ENST00000524543 EHBP1L1Q8N3D4 1523 aa16.06■□□□□ 0.16
TMEM41B-202ENST00000524543 CCDC18Q5T9S5 1454 aa16.06■□□□□ 0.16
TMEM41B-202ENST00000524543 CEP170Q5SW79 1584 aa16.05■□□□□ 0.16
TMEM41B-202ENST00000524543 MAGI3Q5TCQ9 1506 aa16.05■□□□□ 0.16
TMEM41B-202ENST00000524543 FAM50AQ14320 339 aaKnown RBP16.04■□□□□ 0.16
TMEM41B-202ENST00000524543 SUPT6HQ7KZ85 1726 aaKnown RBP16.04■□□□□ 0.16
TMEM41B-202ENST00000524543 SYNJ2O15056 1496 aa16.03■□□□□ 0.16
TMEM41B-202ENST00000524543 MAPKBP1O60336 1514 aa16.02■□□□□ 0.16
TMEM41B-202ENST00000524543 NUP160Q12769 1436 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 513.5 ms