RNA–Protein interactions for RNA: ENST00000524109.1

HSPA9-213, Transcript of heat shock protein family A (Hsp70) member 9, humanhuman

TSL 5

Gene HSPA9, Length 1,175 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA9-213ENST00000524109 SPDYE6P0CI01 402 aa19.4■□□□□ 0.7
HSPA9-213ENST00000524109 SPDYE2Q495Y8 402 aa19.4■□□□□ 0.7
HSPA9-213ENST00000524109 PRDM2Q13029 1718 aa19.38■□□□□ 0.69
HSPA9-213ENST00000524109 RBM42Q9BTD8 480 aaKnown RBP19.37■□□□□ 0.69
HSPA9-213ENST00000524109 ZNF692Q9BU19 519 aaPredicted RBP19.36■□□□□ 0.69
HSPA9-213ENST00000524109 TOPBP1Q92547 1522 aa19.22■□□□□ 0.67
HSPA9-213ENST00000524109 ZNF608Q9ULD9 1512 aaPredicted RBP19.22■□□□□ 0.67
HSPA9-213ENST00000524109 IFT140Q96RY7 1462 aa19.18■□□□□ 0.66
HSPA9-213ENST00000524109 TRIM41Q8WV44 630 aa19.18■□□□□ 0.66
HSPA9-213ENST00000524109 SSUH2Q9Y2M2 353 aa19.18■□□□□ 0.66
HSPA9-213ENST00000524109 DNMBPQ6XZF7 1577 aa19.14■□□□□ 0.65
HSPA9-213ENST00000524109 ABCC8Q09428 1581 aa19.1■□□□□ 0.65
HSPA9-213ENST00000524109 AKT1S1Q96B36 256 aa19.1■□□□□ 0.65
HSPA9-213ENST00000524109 TARBP1Q13395 1621 aaKnown RBP19.08■□□□□ 0.65
HSPA9-213ENST00000524109 EIF4G3O43432 1585 aaKnown RBP19.08■□□□□ 0.65
HSPA9-213ENST00000524109 PROM2Q8N271 834 aa19.03■□□□□ 0.64
HSPA9-213ENST00000524109 POLA1P09884 1462 aaPredicted RBP19.03■□□□□ 0.64
HSPA9-213ENST00000524109 AQRO60306 1485 aaKnown RBP eCLIP19.02■□□□□ 0.634e-9■■■■■ 48.9
HSPA9-213ENST00000524109 RIMBP3CA6NJZ7 1639 aa19■□□□□ 0.63
HSPA9-213ENST00000524109 RIMBP3BA6NNM3 1639 aa19■□□□□ 0.63
HSPA9-213ENST00000524109 RIMBP3Q9UFD9 1639 aa19■□□□□ 0.63
HSPA9-213ENST00000524109 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
HSPA9-213ENST00000524109 ARHGEF11O15085 1522 aa18.94■□□□□ 0.62
HSPA9-213ENST00000524109 CHD1O14646 1710 aa18.94■□□□□ 0.62
HSPA9-213ENST00000524109 CUX1P39880 1505 aa18.92■□□□□ 0.62
HSPA9-213ENST00000524109 FGD5Q6ZNL6 1462 aa18.9■□□□□ 0.62
HSPA9-213ENST00000524109 SOGA1O94964 1423 aa18.9■□□□□ 0.62
HSPA9-213ENST00000524109 REM2Q8IYK8 340 aaPredicted RBP18.89■□□□□ 0.61
HSPA9-213ENST00000524109 FBXO3Q9UK99 471 aa18.89■□□□□ 0.61
HSPA9-213ENST00000524109 TDRD9Q8NDG6 1382 aaKnown RBP18.89■□□□□ 0.61
HSPA9-213ENST00000524109 SPDYE1Q8NFV5 336 aaPredicted RBP18.83■□□□□ 0.6
HSPA9-213ENST00000524109 STAG3Q9UJ98 1225 aa18.83■□□□□ 0.6
HSPA9-213ENST00000524109 SNAPC4Q5SXM2 1469 aa18.81■□□□□ 0.6
HSPA9-213ENST00000524109 WDR97A6NE52 1622 aa18.81■□□□□ 0.6
HSPA9-213ENST00000524109 SUPT5HO00267 1087 aaKnown RBP18.78■□□□□ 0.6
HSPA9-213ENST00000524109 CLEC11AQ9Y240 323 aa18.78■□□□□ 0.6
HSPA9-213ENST00000524109 ARAP1Q96P48 1450 aa18.77■□□□□ 0.59
HSPA9-213ENST00000524109 CLASP1Q7Z460 1538 aa18.74■□□□□ 0.59
HSPA9-213ENST00000524109 CYB5RLQ6IPT4 315 aa18.74■□□□□ 0.59
HSPA9-213ENST00000524109 GRIN2BQ13224 1484 aa18.73■□□□□ 0.59
HSPA9-213ENST00000524109 MAGI1Q96QZ7 1491 aaPredicted RBP18.73■□□□□ 0.59
HSPA9-213ENST00000524109 PBRM1Q86U86 1689 aa18.69■□□□□ 0.58
HSPA9-213ENST00000524109 ABCA10Q8WWZ4 1543 aa18.69■□□□□ 0.58
HSPA9-213ENST00000524109 ABCA5Q8WWZ7 1642 aa18.68■□□□□ 0.58
HSPA9-213ENST00000524109 SYNJ2O15056 1496 aa18.68■□□□□ 0.58
HSPA9-213ENST00000524109 GAPVD1Q14C86 1478 aa18.68■□□□□ 0.58
HSPA9-213ENST00000524109 PITPNM1O00562 1244 aa18.67■□□□□ 0.58
HSPA9-213ENST00000524109 CHMP7Q8WUX9 453 aaPredicted RBP18.66■□□□□ 0.58
HSPA9-213ENST00000524109 SYNJ1O43426 1573 aa18.65■□□□□ 0.58
HSPA9-213ENST00000524109 PRR29P0C7W0 189 aa18.61■□□□□ 0.57
HSPA9-213ENST00000524109 BIVM-ERCC5R4GMW8 1640 aa18.6■□□□□ 0.57
HSPA9-213ENST00000524109 TOP2BQ02880 1626 aa18.6■□□□□ 0.57
HSPA9-213ENST00000524109 WRNQ14191 1432 aaPredicted RBP eCLIP18.57■□□□□ 0.56
HSPA9-213ENST00000524109 VASPP50552 380 aaPredicted RBP18.56■□□□□ 0.56
HSPA9-213ENST00000524109 ADAMTS12P58397 1594 aa18.53■□□□□ 0.56
HSPA9-213ENST00000524109 GRIN2AQ12879 1464 aa18.52■□□□□ 0.55
HSPA9-213ENST00000524109 PLEKHG5O94827 1062 aa18.49■□□□□ 0.55
HSPA9-213ENST00000524109 MIER1Q8N108 512 aa18.49■□□□□ 0.55
HSPA9-213ENST00000524109 PLCD3Q8N3E9 789 aa18.49■□□□□ 0.55
HSPA9-213ENST00000524109 ERCC6L2Q5T890 1561 aa18.49■□□□□ 0.55
HSPA9-213ENST00000524109 CEP170Q5SW79 1584 aa18.48■□□□□ 0.55
HSPA9-213ENST00000524109 CHRDL2Q6WN34 429 aa18.48■□□□□ 0.55
HSPA9-213ENST00000524109 NUP160Q12769 1436 aa18.48■□□□□ 0.55
HSPA9-213ENST00000524109 ERICH3Q5RHP9 1530 aa18.44■□□□□ 0.54
HSPA9-213ENST00000524109 FHAD1B1AJZ9 1412 aa18.43■□□□□ 0.54
HSPA9-213ENST00000524109 SHROOM2Q13796 1616 aa18.41■□□□□ 0.54
HSPA9-213ENST00000524109 KLHL34Q8N239 644 aa18.33■□□□□ 0.52
HSPA9-213ENST00000524109 ZBTB47Q9UFB7 747 aaPredicted RBP18.3■□□□□ 0.52
HSPA9-213ENST00000524109 FXR2P51116 673 aaKnown RBP eCLIP18.28■□□□□ 0.522e-10■□□□□ 8.4
HSPA9-213ENST00000524109 IFNLR1Q8IU57 520 aaPredicted RBP18.28■□□□□ 0.52
HSPA9-213ENST00000524109 CREBZFQ9NS37 354 aa18.28■□□□□ 0.52
HSPA9-213ENST00000524109 RUSC2Q8N2Y8 1516 aa18.27■□□□□ 0.51
HSPA9-213ENST00000524109 PRG4Q92954 1404 aaPredicted RBP18.26■□□□□ 0.51
HSPA9-213ENST00000524109 PRKAR2AP13861 404 aaKnown RBP18.25■□□□□ 0.51
HSPA9-213ENST00000524109 CHADLQ6NUI6 762 aa18.24■□□□□ 0.51
HSPA9-213ENST00000524109 PIP4P2Q8N4L2 257 aa18.24■□□□□ 0.51
HSPA9-213ENST00000524109 IGF1RP08069 1367 aa18.23■□□□□ 0.51
HSPA9-213ENST00000524109 JPH4Q96JJ6 628 aa18.23■□□□□ 0.51
HSPA9-213ENST00000524109 KIF27Q86VH2 1401 aa18.18■□□□□ 0.5
HSPA9-213ENST00000524109 CUL7Q14999 1698 aa18.15■□□□□ 0.5
HSPA9-213ENST00000524109 KIF13AQ9H1H9 1805 aa18.15■□□□□ 0.5
HSPA9-213ENST00000524109 KIAA0586Q9BVV6 1533 aa18.14■□□□□ 0.49
HSPA9-213ENST00000524109 SPOCK2Q92563 424 aa18.12■□□□□ 0.49
HSPA9-213ENST00000524109 NPM1P06748 294 aaKnown RBP eCLIP18.11■□□□□ 0.49
HSPA9-213ENST00000524109 ADCY10Q96PN6 1610 aa18.1■□□□□ 0.49
HSPA9-213ENST00000524109 CARMIL1Q5VZK9 1371 aa18.07■□□□□ 0.48
HSPA9-213ENST00000524109 FARP1Q9Y4F1 1045 aaPredicted RBP18.07■□□□□ 0.48
HSPA9-213ENST00000524109 MNX1P50219 401 aaPredicted RBP18.06■□□□□ 0.48
HSPA9-213ENST00000524109 MAPKBP1O60336 1514 aa18.05■□□□□ 0.48
HSPA9-213ENST00000524109 ABCC10Q5T3U5 1492 aa18.02■□□□□ 0.48
HSPA9-213ENST00000524109 DIP2BQ9P265 1576 aa18■□□□□ 0.47
HSPA9-213ENST00000524109 AMER1Q5JTC6 1135 aaPredicted RBP18■□□□□ 0.47
HSPA9-213ENST00000524109 IQGAP2Q13576 1575 aa17.97■□□□□ 0.47
HSPA9-213ENST00000524109 FAM69CQ0P6D2 419 aa17.97■□□□□ 0.47
HSPA9-213ENST00000524109 PTPRGP23470 1445 aa17.95■□□□□ 0.46
HSPA9-213ENST00000524109 DISP1Q96F81 1524 aa17.94■□□□□ 0.46
HSPA9-213ENST00000524109 TNIKQ9UKE5 1360 aa17.91■□□□□ 0.46
HSPA9-213ENST00000524109 RAPGEF2Q9Y4G8 1499 aa17.91■□□□□ 0.46
HSPA9-213ENST00000524109 NUBP1P53384 320 aa17.9■□□□□ 0.46
HSPA9-213ENST00000524109 CARMIL2Q6F5E8 1435 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms