RNA–Protein interactions for RNA: ENST00000519560.5

SLIT3-206, Transcript of slit guidance ligand 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLIT3, Length 9,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-206ENST00000519560 GOLGA6L6A8MZA4 724 aa18.07■□□□□ 0.48
SLIT3-206ENST00000519560 ABCC9O60706 1549 aa18.05■□□□□ 0.48
SLIT3-206ENST00000519560 SCAF1Q9H7N4 1312 aaKnown RBP18.02■□□□□ 0.48
SLIT3-206ENST00000519560 IRX6P78412 446 aaPredicted RBP18.01■□□□□ 0.47
SLIT3-206ENST00000519560 A0A0G2JS52 829 aa18.01■□□□□ 0.47
SLIT3-206ENST00000519560 PLPPR3Q6T4P5 718 aa18■□□□□ 0.47
SLIT3-206ENST00000519560 NRDCO43847 1150 aa17.96■□□□□ 0.47
SLIT3-206ENST00000519560 CHAF1AQ13111 956 aaPredicted RBP17.96■□□□□ 0.47
SLIT3-206ENST00000519560 PABPN1Q86U42 306 aaKnown RBP eCLIP17.94■□□□□ 0.46
SLIT3-206ENST00000519560 TPRNQ4KMQ1 711 aa17.94■□□□□ 0.46
SLIT3-206ENST00000519560 TULP1O00294 542 aaPredicted RBP17.94■□□□□ 0.46
SLIT3-206ENST00000519560 PPM1GO15355 546 aaPredicted RBP17.93■□□□□ 0.46
SLIT3-206ENST00000519560 FTSJ3Q8IY81 847 aaKnown RBP17.92■□□□□ 0.46
SLIT3-206ENST00000519560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.91■□□□□ 0.46
SLIT3-206ENST00000519560 KDM2AQ9Y2K7 1162 aa17.86■□□□□ 0.45
SLIT3-206ENST00000519560 GOLGA3Q08378 1498 aa17.85■□□□□ 0.45
SLIT3-206ENST00000519560 RTN4Q9NQC3 1192 aaKnown RBP17.85■□□□□ 0.45
SLIT3-206ENST00000519560 PLCB2Q00722 1185 aa17.84■□□□□ 0.45
SLIT3-206ENST00000519560 NACADO15069 1562 aa17.84■□□□□ 0.45
SLIT3-206ENST00000519560 C14orf37Q86TY3 774 aa17.83■□□□□ 0.45
SLIT3-206ENST00000519560 RB1CC1Q8TDY2 1594 aa17.83■□□□□ 0.45
SLIT3-206ENST00000519560 ZBTB7CA1YPR0 619 aa17.83■□□□□ 0.44
SLIT3-206ENST00000519560 NPM1P06748 294 aaKnown RBP eCLIP17.81■□□□□ 0.44
SLIT3-206ENST00000519560 CFAP53Q96M91 514 aa17.8■□□□□ 0.44
SLIT3-206ENST00000519560 LAS1LQ9Y4W2 734 aaKnown RBP17.8■□□□□ 0.44
SLIT3-206ENST00000519560 CLIP1P30622 1438 aa17.8■□□□□ 0.44
SLIT3-206ENST00000519560 MSNP26038 577 aaKnown RBP17.8■□□□□ 0.44
SLIT3-206ENST00000519560 CHIC2Q9UKJ5 165 aa17.8■□□□□ 0.44
SLIT3-206ENST00000519560 HSP90AB1P08238 724 aaKnown RBP17.8■□□□□ 0.44
SLIT3-206ENST00000519560 EIF4G2P78344 907 aaKnown RBP eCLIP17.79■□□□□ 0.44
SLIT3-206ENST00000519560 NOP58Q9Y2X3 529 aaKnown RBP17.79■□□□□ 0.44
SLIT3-206ENST00000519560 L1TD1Q5T7N2 865 aaKnown RBP17.78■□□□□ 0.44
SLIT3-206ENST00000519560 FGD1P98174 961 aa17.78■□□□□ 0.44
SLIT3-206ENST00000519560 MIER1Q8N108 512 aa17.78■□□□□ 0.44
SLIT3-206ENST00000519560 AMER1Q5JTC6 1135 aaPredicted RBP17.74■□□□□ 0.43
SLIT3-206ENST00000519560 CHMP4BQ9H444 224 aaKnown RBP17.74■□□□□ 0.43
SLIT3-206ENST00000519560 PPP1R15AO75807 674 aaPredicted RBP17.74■□□□□ 0.43
SLIT3-206ENST00000519560 MTUS2Q5JR59 1369 aa17.74■□□□□ 0.43
SLIT3-206ENST00000519560 GOLGA6L4A6NEF3 574 aa17.74■□□□□ 0.43
SLIT3-206ENST00000519560 TSPY4P0CV99 314 aa17.73■□□□□ 0.43
SLIT3-206ENST00000519560 TSPY10P0CW01 314 aa17.73■□□□□ 0.43
SLIT3-206ENST00000519560 KNSTRNQ9Y448 316 aa17.72■□□□□ 0.43
SLIT3-206ENST00000519560 DRC7Q8IY82 874 aa17.72■□□□□ 0.43
SLIT3-206ENST00000519560 TAOK2Q9UL54 1235 aa17.72■□□□□ 0.43
SLIT3-206ENST00000519560 CEP164Q9UPV0 1460 aa17.71■□□□□ 0.43
SLIT3-206ENST00000519560 KCNJ4P48050 445 aa17.71■□□□□ 0.42
SLIT3-206ENST00000519560 CEP162Q5TB80 1403 aa17.7■□□□□ 0.42
SLIT3-206ENST00000519560 CLSTN1O94985 981 aa17.7■□□□□ 0.42
SLIT3-206ENST00000519560 PLEKHG5O94827 1062 aa17.7■□□□□ 0.42
SLIT3-206ENST00000519560 CDCA8Q53HL2 280 aa17.7■□□□□ 0.42
SLIT3-206ENST00000519560 HSCBQ8IWL3 235 aa17.7■□□□□ 0.42
SLIT3-206ENST00000519560 OS9Q13438 667 aaPredicted RBP17.68■□□□□ 0.42
SLIT3-206ENST00000519560 NAP1L2Q9ULW6 460 aaPredicted RBP17.68■□□□□ 0.42
SLIT3-206ENST00000519560 MYO15BQ96JP2 1530 aa17.68■□□□□ 0.42
SLIT3-206ENST00000519560 RGS3P49796 1198 aa17.68■□□□□ 0.42
SLIT3-206ENST00000519560 KIAA2012Q0VF49 1180 aa17.67■□□□□ 0.42
SLIT3-206ENST00000519560 RSF1Q96T23 1441 aaPredicted RBP17.67■□□□□ 0.42
SLIT3-206ENST00000519560 MAPK8IP3Q9UPT6 1336 aa17.67■□□□□ 0.42
SLIT3-206ENST00000519560 NPHP1O15259 732 aa17.67■□□□□ 0.42
SLIT3-206ENST00000519560 HAP1P54257 671 aaPredicted RBP17.66■□□□□ 0.42
SLIT3-206ENST00000519560 HIRIP3Q9BW71 556 aaPredicted RBP17.66■□□□□ 0.42
SLIT3-206ENST00000519560 TNIKQ9UKE5 1360 aa17.66■□□□□ 0.42
SLIT3-206ENST00000519560 NOC3LQ8WTT2 800 aaKnown RBP17.66■□□□□ 0.42
SLIT3-206ENST00000519560 GOLGA2Q08379 1002 aa17.65■□□□□ 0.42
SLIT3-206ENST00000519560 SUPT16HQ9Y5B9 1047 aaKnown RBP17.64■□□□□ 0.41
SLIT3-206ENST00000519560 BAZ1AQ9NRL2 1556 aaPredicted RBP17.64■□□□□ 0.41
SLIT3-206ENST00000519560 MS4A1P11836 297 aa17.64■□□□□ 0.41
SLIT3-206ENST00000519560 NCBP3Q53F19 620 aaKnown RBP17.63■□□□□ 0.41
SLIT3-206ENST00000519560 MCCP23508 829 aa17.62■□□□□ 0.41
SLIT3-206ENST00000519560 PPP4R2Q9NY27 417 aa17.62■□□□□ 0.41
SLIT3-206ENST00000519560 PNNQ9H307 717 aaKnown RBP17.62■□□□□ 0.41
SLIT3-206ENST00000519560 GNL2Q13823 731 aaKnown RBP17.58■□□□□ 0.41
SLIT3-206ENST00000519560 TNNT3P45378 269 aaPredicted RBP17.58■□□□□ 0.4
SLIT3-206ENST00000519560 FRAT1Q92837 279 aaPredicted RBP17.58■□□□□ 0.4
SLIT3-206ENST00000519560 SENP3Q9H4L4 574 aaPredicted RBP17.58■□□□□ 0.4
SLIT3-206ENST00000519560 PTMSP20962 102 aa17.57■□□□□ 0.4
SLIT3-206ENST00000519560 NUDCQ9Y266 331 aa17.56■□□□□ 0.4
SLIT3-206ENST00000519560 ARID4BQ4LE39 1312 aaPredicted RBP17.55■□□□□ 0.4
SLIT3-206ENST00000519560 CFAP44Q96MT7 982 aa17.54■□□□□ 0.4
SLIT3-206ENST00000519560 NEUROD2Q15784 382 aa17.54■□□□□ 0.4
SLIT3-206ENST00000519560 DEKP35659 375 aaKnown RBP17.53■□□□□ 0.4
SLIT3-206ENST00000519560 TIMELESSQ9UNS1 1208 aa17.53■□□□□ 0.4
SLIT3-206ENST00000519560 RRP7BPQ9NSQ0 103 aa17.52■□□□□ 0.39
SLIT3-206ENST00000519560 GOLGA6L1Q8N7Z2 621 aa17.52■□□□□ 0.39
SLIT3-206ENST00000519560 WRNQ14191 1432 aaPredicted RBP eCLIP17.51■□□□□ 0.39
SLIT3-206ENST00000519560 SENP3-EIF4A1A0A087X0R7 540 aa17.49■□□□□ 0.39
SLIT3-206ENST00000519560 GBP4Q96PP9 640 aa17.49■□□□□ 0.39
SLIT3-206ENST00000519560 KIF27Q86VH2 1401 aa17.48■□□□□ 0.39
SLIT3-206ENST00000519560 SYAP1Q96A49 352 aaPredicted RBP17.48■□□□□ 0.39
SLIT3-206ENST00000519560 FHAD1B1AJZ9 1412 aa17.47■□□□□ 0.39
SLIT3-206ENST00000519560 ARID3AQ99856 593 aa17.46■□□□□ 0.39
SLIT3-206ENST00000519560 A0A0U1RQG5 324 aaPredicted RBP17.46■□□□□ 0.39
SLIT3-206ENST00000519560 CARD11Q9BXL7 1154 aa17.46■□□□□ 0.39
SLIT3-206ENST00000519560 SPRYD3Q8NCJ5 442 aa17.46■□□□□ 0.39
SLIT3-206ENST00000519560 USP35Q9P2H5 1018 aa17.45■□□□□ 0.38
SLIT3-206ENST00000519560 RGL3Q3MIN7 710 aa17.44■□□□□ 0.38
SLIT3-206ENST00000519560 KIAA1211Q6ZU35 1233 aa17.44■□□□□ 0.38
SLIT3-206ENST00000519560 ISY1Q9ULR0 285 aaKnown RBP17.43■□□□□ 0.38
SLIT3-206ENST00000519560 HTATSF1O43719 755 aaKnown RBP17.43■□□□□ 0.38
SLIT3-206ENST00000519560 TPM4P67936 248 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms