RNA–Protein interactions for RNA: ENST00000519560.5

SLIT3-206, Transcript of slit guidance ligand 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLIT3, Length 9,706 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-206ENST00000519560 DCAF8L2P0C7V8 631 aa22.78■■□□□ 1.24
SLIT3-206ENST00000519560 PELP1Q8IZL8 1130 aaKnown RBP22.55■■□□□ 1.2
SLIT3-206ENST00000519560 NISCHQ9Y2I1 1504 aa22.19■■□□□ 1.14
SLIT3-206ENST00000519560 SUPT5HO00267 1087 aaKnown RBP21.74■■□□□ 1.07
SLIT3-206ENST00000519560 ERICH6Q7L0X2 663 aa21.54■■□□□ 1.04
SLIT3-206ENST00000519560 CCER1Q8TC90 406 aaPredicted RBP21.45■■□□□ 1.02
SLIT3-206ENST00000519560 APLP2Q06481 763 aa21.41■■□□□ 1.02
SLIT3-206ENST00000519560 EHMT2Q96KQ7 1210 aa21.39■■□□□ 1.01
SLIT3-206ENST00000519560 CENPBP07199 599 aaPredicted RBP21.19■□□□□ 0.98
SLIT3-206ENST00000519560 MYT1Q01538 1121 aa21.19■□□□□ 0.98
SLIT3-206ENST00000519560 SHROOM4Q9ULL8 1493 aa21.15■□□□□ 0.98
SLIT3-206ENST00000519560 FAM9AQ8IZU1 332 aaPredicted RBP21.08■□□□□ 0.96
SLIT3-206ENST00000519560 NEFLP07196 543 aa20.87■□□□□ 0.93
SLIT3-206ENST00000519560 TTBK1Q5TCY1 1321 aaPredicted RBP20.82■□□□□ 0.92
SLIT3-206ENST00000519560 ZEB1P37275 1124 aaPredicted RBP20.81■□□□□ 0.92
SLIT3-206ENST00000519560 PCGF6Q9BYE7 350 aa20.81■□□□□ 0.92
SLIT3-206ENST00000519560 DAXXQ9UER7 740 aaPredicted RBP20.55■□□□□ 0.88
SLIT3-206ENST00000519560 YTHDC1Q96MU7 727 aaKnown RBP20.51■□□□□ 0.87
SLIT3-206ENST00000519560 RANGAP1P46060 587 aaPredicted RBP20.41■□□□□ 0.86
SLIT3-206ENST00000519560 ATP1B4Q9UN42 357 aaPredicted RBP20.36■□□□□ 0.85
SLIT3-206ENST00000519560 TRIM41Q8WV44 630 aa20.16■□□□□ 0.82
SLIT3-206ENST00000519560 UBTFP17480 764 aaKnown RBP20.14■□□□□ 0.81
SLIT3-206ENST00000519560 RTL5Q5HYW3 569 aaPredicted RBP20.04■□□□□ 0.8
SLIT3-206ENST00000519560 ZNF316A6NFI3 1004 aaPredicted RBP20.04■□□□□ 0.8
SLIT3-206ENST00000519560 POLR3GLQ9BT43 218 aa19.87■□□□□ 0.77
SLIT3-206ENST00000519560 CLSPNQ9HAW4 1339 aa19.81■□□□□ 0.76
SLIT3-206ENST00000519560 TRIM26Q12899 539 aaPredicted RBP19.77■□□□□ 0.75
SLIT3-206ENST00000519560 MYT1LQ9UL68 1186 aa19.71■□□□□ 0.75
SLIT3-206ENST00000519560 HRCP23327 699 aa19.7■□□□□ 0.74
SLIT3-206ENST00000519560 PPARGC1BQ86YN6 1023 aaKnown RBP19.7■□□□□ 0.74
SLIT3-206ENST00000519560 SLC4A1APQ9BWU0 796 aaKnown RBP19.61■□□□□ 0.73
SLIT3-206ENST00000519560 ITGAEP38570 1179 aa19.6■□□□□ 0.73
SLIT3-206ENST00000519560 CNGB1Q14028 1251 aaPredicted RBP19.6■□□□□ 0.73
SLIT3-206ENST00000519560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.54■□□□□ 0.72
SLIT3-206ENST00000519560 HNRNPUL2Q1KMD3 747 aaKnown RBP19.54■□□□□ 0.72
SLIT3-206ENST00000519560 CHIC1Q5VXU3 224 aa19.45■□□□□ 0.7
SLIT3-206ENST00000519560 ZBTB47Q9UFB7 747 aaPredicted RBP19.41■□□□□ 0.7
SLIT3-206ENST00000519560 DIEXFQ68CQ4 756 aaKnown RBP19.39■□□□□ 0.7
SLIT3-206ENST00000519560 CDK11AQ9UQ88 783 aaPredicted RBP19.31■□□□□ 0.68
SLIT3-206ENST00000519560 BCANQ96GW7 911 aa19.21■□□□□ 0.67
SLIT3-206ENST00000519560 CANXP27824 592 aaKnown RBP19.19■□□□□ 0.66
SLIT3-206ENST00000519560 ANP32AP39687 249 aaKnown RBP19.15■□□□□ 0.66
SLIT3-206ENST00000519560 ANP32BQ92688 251 aaKnown RBP19.15■□□□□ 0.66
SLIT3-206ENST00000519560 GLIPR1L2Q4G1C9 344 aa19.13■□□□□ 0.65
SLIT3-206ENST00000519560 ANP32CO43423 234 aa19.12■□□□□ 0.65
SLIT3-206ENST00000519560 GTF3C3Q9Y5Q9 886 aa19.1■□□□□ 0.65
SLIT3-206ENST00000519560 EIF5BO60841 1220 aaKnown RBP19.07■□□□□ 0.64
SLIT3-206ENST00000519560 FAM50AQ14320 339 aaKnown RBP19.06■□□□□ 0.64
SLIT3-206ENST00000519560 BCL11AQ9H165 835 aa19.05■□□□□ 0.64
SLIT3-206ENST00000519560 SLC24A1O60721 1099 aa19.04■□□□□ 0.64
SLIT3-206ENST00000519560 TRIM52Q96A61 297 aa19.02■□□□□ 0.64
SLIT3-206ENST00000519560 NEFMP07197 916 aa18.99■□□□□ 0.63
SLIT3-206ENST00000519560 LOC105371045A0A1W2PR82 267 aa18.99■□□□□ 0.63
SLIT3-206ENST00000519560 NEUROD1Q13562 356 aa18.98■□□□□ 0.63
SLIT3-206ENST00000519560 ZNF326Q5BKZ1 582 aaKnown RBP18.96■□□□□ 0.63
SLIT3-206ENST00000519560 HSP90AA1P07900 732 aaKnown RBP18.95■□□□□ 0.62
SLIT3-206ENST00000519560 NPM2Q86SE8 214 aaKnown RBP18.88■□□□□ 0.61
SLIT3-206ENST00000519560 UPF2Q9HAU5 1272 aaKnown RBP18.83■□□□□ 0.61
SLIT3-206ENST00000519560 CCDC180Q9P1Z9 1646 aa18.81■□□□□ 0.6
SLIT3-206ENST00000519560 DCAF1Q9Y4B6 1507 aa18.77■□□□□ 0.6
SLIT3-206ENST00000519560 ACIN1Q9UKV3 1341 aaKnown RBP18.67■□□□□ 0.58
SLIT3-206ENST00000519560 CDK11BP21127 795 aaKnown RBP18.62■□□□□ 0.57
SLIT3-206ENST00000519560 NBR1Q14596 966 aa18.57■□□□□ 0.56
SLIT3-206ENST00000519560 ARXQ96QS3 562 aa18.55■□□□□ 0.56
SLIT3-206ENST00000519560 FKBP8Q14318 412 aa18.53■□□□□ 0.56
SLIT3-206ENST00000519560 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.56
SLIT3-206ENST00000519560 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.49■□□□□ 0.55
SLIT3-206ENST00000519560 TNNT2P45379 298 aaPredicted RBP18.48■□□□□ 0.55
SLIT3-206ENST00000519560 CCDC136Q96JN2 1154 aa18.42■□□□□ 0.54
SLIT3-206ENST00000519560 HNRNPUQ00839 825 aaKnown RBP eCLIP18.41■□□□□ 0.54
SLIT3-206ENST00000519560 TONSLQ96HA7 1378 aa18.39■□□□□ 0.53
SLIT3-206ENST00000519560 MYH16Q9H6N6 1097 aa18.38■□□□□ 0.53
SLIT3-206ENST00000519560 TRIM44Q96DX7 344 aaPredicted RBP18.38■□□□□ 0.53
SLIT3-206ENST00000519560 FBLN2P98095 1184 aa18.34■□□□□ 0.53
SLIT3-206ENST00000519560 ESF1Q9H501 851 aaKnown RBP18.33■□□□□ 0.52
SLIT3-206ENST00000519560 ANP32EQ9BTT0 268 aa18.33■□□□□ 0.52
SLIT3-206ENST00000519560 BECN1Q14457 450 aa18.32■□□□□ 0.52
SLIT3-206ENST00000519560 FAM9BQ8IZU0 186 aa18.32■□□□□ 0.52
SLIT3-206ENST00000519560 NCLP19338 710 aaKnown RBP18.31■□□□□ 0.52
SLIT3-206ENST00000519560 GOLGA6L22H0YM25 854 aa18.28■□□□□ 0.52
SLIT3-206ENST00000519560 DDRGK1Q96HY6 314 aa18.27■□□□□ 0.52
SLIT3-206ENST00000519560 STAG3Q9UJ98 1225 aa18.27■□□□□ 0.51
SLIT3-206ENST00000519560 ZNF777Q9ULD5 760 aaPredicted RBP18.26■□□□□ 0.51
SLIT3-206ENST00000519560 WDR43Q15061 677 aaKnown RBP eCLIP18.25■□□□□ 0.51
SLIT3-206ENST00000519560 TMC1Q8TDI8 760 aa18.24■□□□□ 0.51
SLIT3-206ENST00000519560 ZRSR1Q15695 479 aaKnown RBP18.24■□□□□ 0.51
SLIT3-206ENST00000519560 PTMAP06454 111 aaKnown RBP18.21■□□□□ 0.51
SLIT3-206ENST00000519560 SALL2Q9Y467 1007 aaPredicted RBP18.21■□□□□ 0.51
SLIT3-206ENST00000519560 ARID3CA6NKF2 412 aa18.21■□□□□ 0.51
SLIT3-206ENST00000519560 DNTTIP2Q5QJE6 756 aaKnown RBP18.18■□□□□ 0.5
SLIT3-206ENST00000519560 CHGAP10645 457 aaKnown RBP18.14■□□□□ 0.49
SLIT3-206ENST00000519560 CSRNP3Q8WYN3 585 aa18.14■□□□□ 0.49
SLIT3-206ENST00000519560 DDX10Q13206 875 aaKnown RBP18.14■□□□□ 0.49
SLIT3-206ENST00000519560 EEA1Q15075 1411 aa18.13■□□□□ 0.49
SLIT3-206ENST00000519560 SCRIBQ14160 1630 aa18.13■□□□□ 0.49
SLIT3-206ENST00000519560 P3H3Q8IVL6 736 aa18.12■□□□□ 0.49
SLIT3-206ENST00000519560 CASC1Q6TDU7 716 aa18.11■□□□□ 0.49
SLIT3-206ENST00000519560 ERICH6BQ5W0A0 696 aa18.11■□□□□ 0.49
SLIT3-206ENST00000519560 MRS2Q9HD23 443 aa18.1■□□□□ 0.49
SLIT3-206ENST00000519560 NAP1L5Q96NT1 182 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms