RNA–Protein interactions for RNA: ENST00000519336.1

LINC01339-203, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3 BASIC

Gene LINC01339, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-203ENST00000519336 FAM212AQ96EL1 285 aa11.3□□□□□ -0.6
LINC01339-203ENST00000519336 PITPNM1O00562 1244 aa11.28□□□□□ -0.6
LINC01339-203ENST00000519336 RNF25Q96BH1 459 aaPredicted RBP11.25□□□□□ -0.61
LINC01339-203ENST00000519336 MNX1P50219 401 aaPredicted RBP11.24□□□□□ -0.61
LINC01339-203ENST00000519336 RIOK3O14730 519 aaKnown RBP11.22□□□□□ -0.61
LINC01339-203ENST00000519336 RASEFQ8IZ41 740 aa11.22□□□□□ -0.61
LINC01339-203ENST00000519336 HS6ST3Q8IZP7 471 aa11.22□□□□□ -0.61
LINC01339-203ENST00000519336 TAOK2Q9UL54 1235 aa11.22□□□□□ -0.61
LINC01339-203ENST00000519336 TSHZ2Q9NRE2 1034 aa11.19□□□□□ -0.62
LINC01339-203ENST00000519336 BCANQ96GW7 911 aa11.18□□□□□ -0.62
LINC01339-203ENST00000519336 KDM2AQ9Y2K7 1162 aa11.18□□□□□ -0.62
LINC01339-203ENST00000519336 CHADLQ6NUI6 762 aa11.16□□□□□ -0.62
LINC01339-203ENST00000519336 STK25O00506 426 aa11.15□□□□□ -0.62
LINC01339-203ENST00000519336 PYGBP11216 843 aa11.15□□□□□ -0.62
LINC01339-203ENST00000519336 VGFO15240 615 aaPredicted RBP11.13□□□□□ -0.63
LINC01339-203ENST00000519336 CHRM1P11229 460 aaPredicted RBP11.11□□□□□ -0.63
LINC01339-203ENST00000519336 TSPYL2Q9H2G4 693 aaPredicted RBP11.1□□□□□ -0.63
LINC01339-203ENST00000519336 STK24Q9Y6E0 443 aa11.08□□□□□ -0.64
LINC01339-203ENST00000519336 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.06□□□□□ -0.64
LINC01339-203ENST00000519336 NKX1-1Q15270 411 aaPredicted RBP11.06□□□□□ -0.64
LINC01339-203ENST00000519336 ZFP91Q96JP5 570 aaPredicted RBP11.06□□□□□ -0.64
LINC01339-203ENST00000519336 BCL11BQ9C0K0 894 aaPredicted RBP11.05□□□□□ -0.64
LINC01339-203ENST00000519336 FARP1Q9Y4F1 1045 aaPredicted RBP11.05□□□□□ -0.64
LINC01339-203ENST00000519336 DNAJC5Q9H3Z4 198 aa11.04□□□□□ -0.64
LINC01339-203ENST00000519336 PRKAR2AP13861 404 aaKnown RBP11.03□□□□□ -0.64
LINC01339-203ENST00000519336 GTPBP6O43824 516 aaPredicted RBP11□□□□□ -0.65
LINC01339-203ENST00000519336 SGIP1Q9BQI5 828 aa10.98□□□□□ -0.65
LINC01339-203ENST00000519336 ZNF467Q7Z7K2 595 aaPredicted RBP10.96□□□□□ -0.65
LINC01339-203ENST00000519336 PRKCSHP14314 528 aaPredicted RBP10.95□□□□□ -0.66
LINC01339-203ENST00000519336 PAK3O75914 559 aaPredicted RBP10.93□□□□□ -0.66
LINC01339-203ENST00000519336 RYDENQ9NUL5 291 aaKnown RBP10.93□□□□□ -0.66
LINC01339-203ENST00000519336 PCDHB8Q9UN66 801 aa10.93□□□□□ -0.66
LINC01339-203ENST00000519336 PCDHB13Q9Y5F0 798 aa10.93□□□□□ -0.66
LINC01339-203ENST00000519336 FXR2P51116 673 aaKnown RBP eCLIP10.92□□□□□ -0.66
LINC01339-203ENST00000519336 PDAP1Q13442 181 aaKnown RBP10.9□□□□□ -0.66
LINC01339-203ENST00000519336 NBR1Q14596 966 aa10.9□□□□□ -0.66
LINC01339-203ENST00000519336 CHRDL2Q6WN34 429 aa10.89□□□□□ -0.67
LINC01339-203ENST00000519336 CCDC61Q9Y6R9 512 aa10.89□□□□□ -0.67
LINC01339-203ENST00000519336 TPRNQ4KMQ1 711 aa10.87□□□□□ -0.67
LINC01339-203ENST00000519336 PSEN1P49768 467 aa10.85□□□□□ -0.67
LINC01339-203ENST00000519336 PIP4P2Q8N4L2 257 aa10.85□□□□□ -0.67
LINC01339-203ENST00000519336 ZNF579Q8NAF0 562 aaKnown RBP10.84□□□□□ -0.67
LINC01339-203ENST00000519336 MAP3K13O43283 966 aa10.8□□□□□ -0.68
LINC01339-203ENST00000519336 IFNL1Q8IU54 200 aa10.8□□□□□ -0.68
LINC01339-203ENST00000519336 ZRANB1Q9UGI0 708 aa10.78□□□□□ -0.68
LINC01339-203ENST00000519336 KIF12Q96FN5 646 aa10.76□□□□□ -0.69
LINC01339-203ENST00000519336 CD44P16070 742 aaKnown RBP10.75□□□□□ -0.69
LINC01339-203ENST00000519336 CABP2Q9NPB3 220 aa10.75□□□□□ -0.69
LINC01339-203ENST00000519336 MFRPQ9BY79 579 aa10.74□□□□□ -0.69
LINC01339-203ENST00000519336 WDR70Q9NW82 654 aa10.74□□□□□ -0.69
LINC01339-203ENST00000519336 EFCAB3Q8N7B9 438 aa10.72□□□□□ -0.69
LINC01339-203ENST00000519336 PHF12Q96QT6 1004 aa10.71□□□□□ -0.69
LINC01339-203ENST00000519336 CADPS2Q86UW7 1296 aa10.7□□□□□ -0.7
LINC01339-203ENST00000519336 NLRP6P59044 892 aa10.68□□□□□ -0.7
LINC01339-203ENST00000519336 P3H3Q8IVL6 736 aa10.66□□□□□ -0.7
LINC01339-203ENST00000519336 PHF8Q9UPP1 1060 aa10.66□□□□□ -0.7
LINC01339-203ENST00000519336 SOX12O15370 315 aa10.65□□□□□ -0.7
LINC01339-203ENST00000519336 PPP1R37O75864 691 aa10.65□□□□□ -0.7
LINC01339-203ENST00000519336 GOLGA2Q08379 1002 aa10.65□□□□□ -0.7
LINC01339-203ENST00000519336 FBXO22Q8NEZ5 403 aa10.61□□□□□ -0.71
LINC01339-203ENST00000519336 TMEM106CQ9BVX2 250 aa10.61□□□□□ -0.71
LINC01339-203ENST00000519336 KCNV2Q8TDN2 545 aa10.59□□□□□ -0.71
LINC01339-203ENST00000519336 MS4A3Q96HJ5 214 aa10.58□□□□□ -0.72
LINC01339-203ENST00000519336 MKRN3Q13064 507 aaKnown RBP10.55□□□□□ -0.72
LINC01339-203ENST00000519336 TRPC6Q9Y210 931 aa10.55□□□□□ -0.72
LINC01339-203ENST00000519336 C19orf67A6NJJ6 358 aa10.53□□□□□ -0.72
LINC01339-203ENST00000519336 MS4A4AQ96JQ5 239 aa10.51□□□□□ -0.73
LINC01339-203ENST00000519336 E2F4Q16254 413 aa10.5□□□□□ -0.73
LINC01339-203ENST00000519336 LARP6Q9BRS8 491 aaKnown RBP10.49□□□□□ -0.73
LINC01339-203ENST00000519336 PDE4AP27815 886 aa10.47□□□□□ -0.73
LINC01339-203ENST00000519336 TULP1O00294 542 aaPredicted RBP10.46□□□□□ -0.73
LINC01339-203ENST00000519336 ARHGEF1Q92888 912 aaKnown RBP10.46□□□□□ -0.73
LINC01339-203ENST00000519336 NCKAP5LQ9HCH0 1330 aa10.45□□□□□ -0.74
LINC01339-203ENST00000519336 TTLL13PA6NNM8 815 aa10.45□□□□□ -0.74
LINC01339-203ENST00000519336 TIE1P35590 1138 aa10.45□□□□□ -0.74
LINC01339-203ENST00000519336 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.45□□□□□ -0.74
LINC01339-203ENST00000519336 HAX1O00165 279 aa10.44□□□□□ -0.74
LINC01339-203ENST00000519336 LMOD2Q6P5Q4 547 aa10.43□□□□□ -0.74
LINC01339-203ENST00000519336 GALR2O43603 387 aaPredicted RBP10.41□□□□□ -0.74
LINC01339-203ENST00000519336 DDX27Q96GQ7 796 aaKnown RBP10.41□□□□□ -0.74
LINC01339-203ENST00000519336 BMP2KQ9NSY1 1161 aaPredicted RBP10.41□□□□□ -0.74
LINC01339-203ENST00000519336 TRIM35Q9UPQ4 493 aa10.41□□□□□ -0.74
LINC01339-203ENST00000519336 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.4□□□□□ -0.74
LINC01339-203ENST00000519336 SEMA3EO15041 775 aa10.38□□□□□ -0.75
LINC01339-203ENST00000519336 CRISPLD2Q9H0B8 497 aa10.38□□□□□ -0.75
LINC01339-203ENST00000519336 MFSD10Q14728 455 aa10.36□□□□□ -0.75
LINC01339-203ENST00000519336 DPY19L2Q6NUT2 758 aa10.34□□□□□ -0.75
LINC01339-203ENST00000519336 EVX2Q03828 476 aa10.33□□□□□ -0.76
LINC01339-203ENST00000519336 TESPA1A2RU30 521 aaPredicted RBP10.31□□□□□ -0.76
LINC01339-203ENST00000519336 ATN1P54259 1190 aaPredicted RBP10.3□□□□□ -0.76
LINC01339-203ENST00000519336 PPP1R15BQ5SWA1 713 aa10.3□□□□□ -0.76
LINC01339-203ENST00000519336 G3V3G9 751 aa10.29□□□□□ -0.76
LINC01339-203ENST00000519336 SMYD5Q6GMV2 418 aa10.29□□□□□ -0.76
LINC01339-203ENST00000519336 ILDR1Q86SU0 546 aaPredicted RBP10.29□□□□□ -0.76
LINC01339-203ENST00000519336 GPHNQ9NQX3 736 aaPredicted RBP10.29□□□□□ -0.76
LINC01339-203ENST00000519336 CLCN6P51797 869 aa10.28□□□□□ -0.76
LINC01339-203ENST00000519336 MICALL2Q8IY33 904 aa10.27□□□□□ -0.77
LINC01339-203ENST00000519336 TMC2Q8TDI7 906 aa10.27□□□□□ -0.77
LINC01339-203ENST00000519336 CAMK2BQ13554 666 aa10.26□□□□□ -0.77
LINC01339-203ENST00000519336 ZC3H15Q8WU90 426 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms