RNA–Protein interactions for RNA: ENST00000517935.1

CDH12P3-201, Transcript of cadherin 12 pseudogene 3, humanhuman

BASIC

Gene CDH12P3, Length 295 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P3-201ENST00000517935 DNMBPQ6XZF7 1577 aa10.04□□□□□ -0.8
CDH12P3-201ENST00000517935 ADGRL1O94910 1474 aa10.04□□□□□ -0.8
CDH12P3-201ENST00000517935 SNAPC4Q5SXM2 1469 aa10.04□□□□□ -0.8
CDH12P3-201ENST00000517935 FAM69CQ0P6D2 419 aa10.03□□□□□ -0.8
CDH12P3-201ENST00000517935 WDR97A6NE52 1622 aa10.03□□□□□ -0.8
CDH12P3-201ENST00000517935 SYNJ2O15056 1496 aa10.03□□□□□ -0.8
CDH12P3-201ENST00000517935 ABCC10Q5T3U5 1492 aa10.03□□□□□ -0.8
CDH12P3-201ENST00000517935 WIZO95785 1651 aa10.02□□□□□ -0.8
CDH12P3-201ENST00000517935 TDRD9Q8NDG6 1382 aaKnown RBP10□□□□□ -0.81
CDH12P3-201ENST00000517935 DISP3Q9P2K9 1392 aa9.98□□□□□ -0.81
CDH12P3-201ENST00000517935 POLA1P09884 1462 aaPredicted RBP9.98□□□□□ -0.81
CDH12P3-201ENST00000517935 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.97□□□□□ -0.81
CDH12P3-201ENST00000517935 GRIN2BQ13224 1484 aa9.96□□□□□ -0.82
CDH12P3-201ENST00000517935 MAPKBP1O60336 1514 aa9.94□□□□□ -0.82
CDH12P3-201ENST00000517935 SOGA1O94964 1423 aa9.94□□□□□ -0.82
CDH12P3-201ENST00000517935 DIP2BQ9P265 1576 aa9.93□□□□□ -0.82
CDH12P3-201ENST00000517935 RAD54L2Q9Y4B4 1467 aa9.91□□□□□ -0.82
CDH12P3-201ENST00000517935 NPM1P06748 294 aaKnown RBP eCLIP9.91□□□□□ -0.82
CDH12P3-201ENST00000517935 CEP170Q5SW79 1584 aa9.9□□□□□ -0.82
CDH12P3-201ENST00000517935 SLC4A2P04920 1241 aa9.9□□□□□ -0.82
CDH12P3-201ENST00000517935 TOP2AP11388 1531 aaKnown RBP9.9□□□□□ -0.82
CDH12P3-201ENST00000517935 SHROOM2Q13796 1616 aa9.86□□□□□ -0.83
CDH12P3-201ENST00000517935 EHMT2Q96KQ7 1210 aa9.86□□□□□ -0.83
CDH12P3-201ENST00000517935 TOP2BQ02880 1626 aa9.85□□□□□ -0.83
CDH12P3-201ENST00000517935 FOXD4L1Q9NU39 408 aa9.84□□□□□ -0.83
CDH12P3-201ENST00000517935 NUP160Q12769 1436 aa9.82□□□□□ -0.84
CDH12P3-201ENST00000517935 GRIN2AQ12879 1464 aa9.81□□□□□ -0.84
CDH12P3-201ENST00000517935 TSPOAP1O95153 1857 aa9.8□□□□□ -0.84
CDH12P3-201ENST00000517935 CCDC88BA6NC98 1476 aa9.79□□□□□ -0.84
CDH12P3-201ENST00000517935 SPATA31D1Q6ZQQ2 1576 aa9.79□□□□□ -0.84
CDH12P3-201ENST00000517935 FGD5Q6ZNL6 1462 aa9.79□□□□□ -0.84
CDH12P3-201ENST00000517935 RNF39Q9H2S5 420 aa9.78□□□□□ -0.84
CDH12P3-201ENST00000517935 PBRM1Q86U86 1689 aa9.77□□□□□ -0.84
CDH12P3-201ENST00000517935 PRG4Q92954 1404 aaPredicted RBP9.77□□□□□ -0.85
CDH12P3-201ENST00000517935 ZBTB22O15209 634 aa9.77□□□□□ -0.85
CDH12P3-201ENST00000517935 CERKQ8TCT0 537 aa9.77□□□□□ -0.85
CDH12P3-201ENST00000517935 U3KPZ7 1027 aaPredicted RBP9.76□□□□□ -0.85
CDH12P3-201ENST00000517935 ADCY10Q96PN6 1610 aa9.74□□□□□ -0.85
CDH12P3-201ENST00000517935 COL17A1Q9UMD9 1497 aaPredicted RBP9.73□□□□□ -0.85
CDH12P3-201ENST00000517935 CSRNP3Q8WYN3 585 aa9.73□□□□□ -0.85
CDH12P3-201ENST00000517935 GLI2P10070 1586 aa9.72□□□□□ -0.85
CDH12P3-201ENST00000517935 MYCNP04198 464 aaPredicted RBP9.72□□□□□ -0.85
CDH12P3-201ENST00000517935 JPH4Q96JJ6 628 aa9.72□□□□□ -0.85
CDH12P3-201ENST00000517935 ABCA5Q8WWZ7 1642 aa9.71□□□□□ -0.86
CDH12P3-201ENST00000517935 PPRC1Q5VV67 1664 aaKnown RBP9.71□□□□□ -0.86
CDH12P3-201ENST00000517935 C1QBPQ07021 282 aaKnown RBP9.7□□□□□ -0.86
CDH12P3-201ENST00000517935 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.69□□□□□ -0.86
CDH12P3-201ENST00000517935 HNRNPUL2Q1KMD3 747 aaKnown RBP9.69□□□□□ -0.86
CDH12P3-201ENST00000517935 PCF11O94913 1555 aaKnown RBP9.68□□□□□ -0.86
CDH12P3-201ENST00000517935 ABCA10Q8WWZ4 1543 aa9.68□□□□□ -0.86
CDH12P3-201ENST00000517935 TEX14Q8IWB6 1497 aa9.68□□□□□ -0.86
CDH12P3-201ENST00000517935 ADAMTS12P58397 1594 aa9.67□□□□□ -0.86
CDH12P3-201ENST00000517935 PLB1Q6P1J6 1458 aa9.66□□□□□ -0.86
CDH12P3-201ENST00000517935 FHAD1B1AJZ9 1412 aa9.66□□□□□ -0.86
CDH12P3-201ENST00000517935 PTPRMP28827 1452 aa9.66□□□□□ -0.86
CDH12P3-201ENST00000517935 CUX1P39880 1505 aa9.65□□□□□ -0.86
CDH12P3-201ENST00000517935 SAMD1Q6SPF0 538 aaPredicted RBP9.63□□□□□ -0.87
CDH12P3-201ENST00000517935 ASXL2Q76L83 1435 aa9.62□□□□□ -0.87
CDH12P3-201ENST00000517935 APLP2Q06481 763 aa9.61□□□□□ -0.87
CDH12P3-201ENST00000517935 KIAA0586Q9BVV6 1533 aa9.61□□□□□ -0.87
CDH12P3-201ENST00000517935 MAP3K4Q9Y6R4 1608 aa9.6□□□□□ -0.87
CDH12P3-201ENST00000517935 ABCC2Q92887 1545 aa9.6□□□□□ -0.87
CDH12P3-201ENST00000517935 CACNB1Q02641 598 aaPredicted RBP9.59□□□□□ -0.87
CDH12P3-201ENST00000517935 ADAMTSL3P82987 1691 aa9.58□□□□□ -0.88
CDH12P3-201ENST00000517935 EPRSP07814 1512 aaKnown RBP9.56□□□□□ -0.88
CDH12P3-201ENST00000517935 ERICH3Q5RHP9 1530 aa9.56□□□□□ -0.88
CDH12P3-201ENST00000517935 RUSC2Q8N2Y8 1516 aa9.56□□□□□ -0.88
CDH12P3-201ENST00000517935 KIF21BO75037 1637 aa9.54□□□□□ -0.88
CDH12P3-201ENST00000517935 PTPRGP23470 1445 aa9.54□□□□□ -0.88
CDH12P3-201ENST00000517935 HSPA2P54652 639 aa9.52□□□□□ -0.89
CDH12P3-201ENST00000517935 UHRF1BP1LA0JNW5 1464 aa9.52□□□□□ -0.89
CDH12P3-201ENST00000517935 WRNQ14191 1432 aaPredicted RBP eCLIP9.51□□□□□ -0.89
CDH12P3-201ENST00000517935 CAPN15O75808 1086 aa9.5□□□□□ -0.89
CDH12P3-201ENST00000517935 ATXN8OSP0DMR3 200 aa9.5□□□□□ -0.89
CDH12P3-201ENST00000517935 IQSEC2Q5JU85 1478 aa9.49□□□□□ -0.89
CDH12P3-201ENST00000517935 SPINK5Q9NQ38 1064 aaPredicted RBP9.49□□□□□ -0.89
CDH12P3-201ENST00000517935 MAGI3Q5TCQ9 1506 aa9.49□□□□□ -0.89
CDH12P3-201ENST00000517935 KDM5BQ9UGL1 1544 aa9.46□□□□□ -0.89
CDH12P3-201ENST00000517935 ARAP3Q8WWN8 1544 aa9.46□□□□□ -0.9
CDH12P3-201ENST00000517935 MADDQ8WXG6 1647 aa9.45□□□□□ -0.9
CDH12P3-201ENST00000517935 CUL7Q14999 1698 aa9.45□□□□□ -0.9
CDH12P3-201ENST00000517935 BCORL1Q5H9F3 1711 aa9.45□□□□□ -0.9
CDH12P3-201ENST00000517935 TNIKQ9UKE5 1360 aa9.45□□□□□ -0.9
CDH12P3-201ENST00000517935 ZNF219Q9P2Y4 722 aaPredicted RBP9.44□□□□□ -0.9
CDH12P3-201ENST00000517935 CD109Q6YHK3 1445 aa9.44□□□□□ -0.9
CDH12P3-201ENST00000517935 UACAQ9BZF9 1416 aa9.44□□□□□ -0.9
CDH12P3-201ENST00000517935 YEATS2Q9ULM3 1422 aa9.44□□□□□ -0.9
CDH12P3-201ENST00000517935 CARMIL2Q6F5E8 1435 aa9.42□□□□□ -0.9
CDH12P3-201ENST00000517935 ATF5Q9Y2D1 282 aaPredicted RBP9.42□□□□□ -0.9
CDH12P3-201ENST00000517935 PHLDB1Q86UU1 1377 aa9.41□□□□□ -0.9
CDH12P3-201ENST00000517935 WDR7Q9Y4E6 1490 aa9.4□□□□□ -0.9
CDH12P3-201ENST00000517935 CFAP43Q8NDM7 1665 aa9.4□□□□□ -0.9
CDH12P3-201ENST00000517935 ARID4BQ4LE39 1312 aaPredicted RBP9.39□□□□□ -0.91
CDH12P3-201ENST00000517935 PTPRTO14522 1441 aa9.38□□□□□ -0.91
CDH12P3-201ENST00000517935 MED1Q15648 1581 aaPredicted RBP9.37□□□□□ -0.91
CDH12P3-201ENST00000517935 RIMS1Q86UR5 1692 aaKnown RBP9.37□□□□□ -0.91
CDH12P3-201ENST00000517935 ZCCHC11Q5TAX3 1644 aaKnown RBP9.37□□□□□ -0.91
CDH12P3-201ENST00000517935 LTBP4Q8N2S1 1624 aa9.37□□□□□ -0.91
CDH12P3-201ENST00000517935 TTBK1Q5TCY1 1321 aaPredicted RBP9.36□□□□□ -0.91
CDH12P3-201ENST00000517935 STRCQ7RTU9 1775 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms