RNA–Protein interactions for RNA: ENST00000517935.1

CDH12P3-201, Transcript of cadherin 12 pseudogene 3, humanhuman

BASIC

Gene CDH12P3, Length 295 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P3-201ENST00000517935 AEBP2Q6ZN18 517 aaPredicted RBP15.67■□□□□ 0.1
CDH12P3-201ENST00000517935 CHIC1Q5VXU3 224 aa15.32■□□□□ 0.04
CDH12P3-201ENST00000517935 PHF23Q9BUL5 403 aaPredicted RBP13.44□□□□□ -0.26
CDH12P3-201ENST00000517935 SENP3Q9H4L4 574 aaPredicted RBP13.36□□□□□ -0.27
CDH12P3-201ENST00000517935 NISCHQ9Y2I1 1504 aa13.34□□□□□ -0.27
CDH12P3-201ENST00000517935 ABCC9O60706 1549 aa13□□□□□ -0.33
CDH12P3-201ENST00000517935 DNAJC5BQ9UF47 199 aa12.91□□□□□ -0.34
CDH12P3-201ENST00000517935 DNAJC5Q9H3Z4 198 aa12.53□□□□□ -0.4
CDH12P3-201ENST00000517935 PLPPR3Q6T4P5 718 aa12.46□□□□□ -0.41
CDH12P3-201ENST00000517935 FOXD1Q16676 465 aa12.37□□□□□ -0.43
CDH12P3-201ENST00000517935 CCDC180Q9P1Z9 1646 aa12.33□□□□□ -0.44
CDH12P3-201ENST00000517935 RB1CC1Q8TDY2 1594 aa12.12□□□□□ -0.47
CDH12P3-201ENST00000517935 PABPN1Q86U42 306 aaKnown RBP eCLIP11.97□□□□□ -0.49
CDH12P3-201ENST00000517935 ADRA2BP18089 450 aa11.88□□□□□ -0.51
CDH12P3-201ENST00000517935 PPP6R1Q9UPN7 881 aa11.87□□□□□ -0.51
CDH12P3-201ENST00000517935 NACADO15069 1562 aa11.87□□□□□ -0.51
CDH12P3-201ENST00000517935 CECR2Q9BXF3 1484 aa11.85□□□□□ -0.51
CDH12P3-201ENST00000517935 BICRAQ9NZM4 1560 aa11.75□□□□□ -0.53
CDH12P3-201ENST00000517935 CC2D2AQ9P2K1 1620 aa11.73□□□□□ -0.53
CDH12P3-201ENST00000517935 UNC13AQ9UPW8 1703 aa11.72□□□□□ -0.53
CDH12P3-201ENST00000517935 PIAS4Q8N2W9 510 aaPredicted RBP11.69□□□□□ -0.54
CDH12P3-201ENST00000517935 SHROOM4Q9ULL8 1493 aa11.65□□□□□ -0.54
CDH12P3-201ENST00000517935 CUX2O14529 1486 aa11.63□□□□□ -0.55
CDH12P3-201ENST00000517935 EIF4G1Q04637 1599 aaKnown RBP11.54□□□□□ -0.56
CDH12P3-201ENST00000517935 TRIM41Q8WV44 630 aa11.53□□□□□ -0.56
CDH12P3-201ENST00000517935 DCAF8L2P0C7V8 631 aa11.52□□□□□ -0.57
CDH12P3-201ENST00000517935 MYO15BQ96JP2 1530 aa11.51□□□□□ -0.57
CDH12P3-201ENST00000517935 MSH5O43196 834 aa11.46□□□□□ -0.57
CDH12P3-201ENST00000517935 ERCC6Q03468 1493 aa11.32□□□□□ -0.6
CDH12P3-201ENST00000517935 SCRIBQ14160 1630 aa11.13□□□□□ -0.63
CDH12P3-201ENST00000517935 DCAF1Q9Y4B6 1507 aa11.04□□□□□ -0.64
CDH12P3-201ENST00000517935 THOC2Q8NI27 1593 aaKnown RBP11.01□□□□□ -0.65
CDH12P3-201ENST00000517935 NCAPD3P42695 1498 aa10.98□□□□□ -0.65
CDH12P3-201ENST00000517935 PPP4R3CPQ6ZMV5 832 aa10.97□□□□□ -0.65
CDH12P3-201ENST00000517935 OSCARQ8IYS5 282 aa10.97□□□□□ -0.65
CDH12P3-201ENST00000517935 SCAF1Q9H7N4 1312 aaKnown RBP10.93□□□□□ -0.66
CDH12P3-201ENST00000517935 NESP48681 1621 aa10.93□□□□□ -0.66
CDH12P3-201ENST00000517935 BAZ1AQ9NRL2 1556 aaPredicted RBP10.89□□□□□ -0.67
CDH12P3-201ENST00000517935 ZCCHC6Q5VYS8 1495 aaKnown RBP10.87□□□□□ -0.67
CDH12P3-201ENST00000517935 LAMC3Q9Y6N6 1575 aa10.83□□□□□ -0.68
CDH12P3-201ENST00000517935 RIMBP3CA6NJZ7 1639 aa10.83□□□□□ -0.68
CDH12P3-201ENST00000517935 RIMBP3BA6NNM3 1639 aa10.83□□□□□ -0.68
CDH12P3-201ENST00000517935 RIMBP3Q9UFD9 1639 aa10.83□□□□□ -0.68
CDH12P3-201ENST00000517935 TRHP20396 242 aaPredicted RBP10.82□□□□□ -0.68
CDH12P3-201ENST00000517935 SMARCA2P51531 1590 aa10.82□□□□□ -0.68
CDH12P3-201ENST00000517935 PDS5BQ9NTI5 1447 aa10.81□□□□□ -0.68
CDH12P3-201ENST00000517935 HMGXB3Q12766 1538 aa10.8□□□□□ -0.68
CDH12P3-201ENST00000517935 ILDR1Q86SU0 546 aaPredicted RBP10.79□□□□□ -0.68
CDH12P3-201ENST00000517935 MAPK8IP2Q13387 824 aaPredicted RBP10.78□□□□□ -0.68
CDH12P3-201ENST00000517935 ATAD2BQ9ULI0 1458 aa10.78□□□□□ -0.68
CDH12P3-201ENST00000517935 KIF21AQ7Z4S6 1674 aa10.76□□□□□ -0.69
CDH12P3-201ENST00000517935 ARHGEF11O15085 1522 aa10.74□□□□□ -0.69
CDH12P3-201ENST00000517935 WDR62O43379 1518 aa10.73□□□□□ -0.69
CDH12P3-201ENST00000517935 MRC2Q9UBG0 1479 aa10.72□□□□□ -0.69
CDH12P3-201ENST00000517935 NCBP3Q53F19 620 aaKnown RBP10.71□□□□□ -0.69
CDH12P3-201ENST00000517935 CYB5RLQ6IPT4 315 aa10.7□□□□□ -0.7
CDH12P3-201ENST00000517935 CNKSR2Q8WXI2 1034 aa10.67□□□□□ -0.7
CDH12P3-201ENST00000517935 KCNA4P22459 653 aa10.65□□□□□ -0.7
CDH12P3-201ENST00000517935 DMRT2Q9Y5R5 561 aa10.65□□□□□ -0.7
CDH12P3-201ENST00000517935 BAZ1BQ9UIG0 1483 aaKnown RBP10.62□□□□□ -0.71
CDH12P3-201ENST00000517935 CADPSQ9ULU8 1353 aa10.59□□□□□ -0.71
CDH12P3-201ENST00000517935 ARAP1Q96P48 1450 aa10.56□□□□□ -0.72
CDH12P3-201ENST00000517935 SMARCA4P51532 1647 aa10.55□□□□□ -0.72
CDH12P3-201ENST00000517935 PEG3Q9GZU2 1588 aa10.52□□□□□ -0.73
CDH12P3-201ENST00000517935 CEP164Q9UPV0 1460 aa10.51□□□□□ -0.73
CDH12P3-201ENST00000517935 RSF1Q96T23 1441 aaPredicted RBP10.5□□□□□ -0.73
CDH12P3-201ENST00000517935 NPM3O75607 178 aaKnown RBP10.5□□□□□ -0.73
CDH12P3-201ENST00000517935 RNF216Q9NWF9 866 aaPredicted RBP10.46□□□□□ -0.73
CDH12P3-201ENST00000517935 POTEDQ86YR6 584 aa10.45□□□□□ -0.74
CDH12P3-201ENST00000517935 FANCD2Q9BXW9 1451 aa10.42□□□□□ -0.74
CDH12P3-201ENST00000517935 HOXD11P31277 338 aaPredicted RBP10.41□□□□□ -0.74
CDH12P3-201ENST00000517935 URB2Q14146 1524 aaKnown RBP10.37□□□□□ -0.75
CDH12P3-201ENST00000517935 IFT140Q96RY7 1462 aa10.36□□□□□ -0.75
CDH12P3-201ENST00000517935 ZNF608Q9ULD9 1512 aaPredicted RBP10.36□□□□□ -0.75
CDH12P3-201ENST00000517935 KDM4FA0A1W2PPD8 638 aa10.31□□□□□ -0.76
CDH12P3-201ENST00000517935 CHD1O14646 1710 aa10.3□□□□□ -0.76
CDH12P3-201ENST00000517935 CFTRP13569 1480 aa10.3□□□□□ -0.76
CDH12P3-201ENST00000517935 FBXO41Q8TF61 875 aa10.29□□□□□ -0.76
CDH12P3-201ENST00000517935 EIF4G3O43432 1585 aaKnown RBP10.26□□□□□ -0.77
CDH12P3-201ENST00000517935 ERCC6L2Q5T890 1561 aa10.26□□□□□ -0.77
CDH12P3-201ENST00000517935 FBLN2P98095 1184 aa10.25□□□□□ -0.77
CDH12P3-201ENST00000517935 DCAF8L1A6NGE4 600 aa10.24□□□□□ -0.77
CDH12P3-201ENST00000517935 CLASP1Q7Z460 1538 aa10.23□□□□□ -0.77
CDH12P3-201ENST00000517935 LMTK3Q96Q04 1460 aa10.22□□□□□ -0.77
CDH12P3-201ENST00000517935 MROH2BQ7Z745 1585 aa10.22□□□□□ -0.77
CDH12P3-201ENST00000517935 SOCS7O14512 581 aa10.21□□□□□ -0.77
CDH12P3-201ENST00000517935 GAPVD1Q14C86 1478 aa10.19□□□□□ -0.78
CDH12P3-201ENST00000517935 AQRO60306 1485 aaKnown RBP eCLIP10.17□□□□□ -0.78
CDH12P3-201ENST00000517935 SLC4A1APQ9BWU0 796 aaKnown RBP10.17□□□□□ -0.78
CDH12P3-201ENST00000517935 SYNJ1O43426 1573 aa10.16□□□□□ -0.78
CDH12P3-201ENST00000517935 ABCC8Q09428 1581 aa10.15□□□□□ -0.78
CDH12P3-201ENST00000517935 TOPBP1Q92547 1522 aa10.14□□□□□ -0.79
CDH12P3-201ENST00000517935 HECW2Q9P2P5 1572 aa10.14□□□□□ -0.79
CDH12P3-201ENST00000517935 KIF13AQ9H1H9 1805 aa10.11□□□□□ -0.79
CDH12P3-201ENST00000517935 TARBP1Q13395 1621 aaKnown RBP10.11□□□□□ -0.79
CDH12P3-201ENST00000517935 CHMP7Q8WUX9 453 aaPredicted RBP10.1□□□□□ -0.79
CDH12P3-201ENST00000517935 MAGI1Q96QZ7 1491 aaPredicted RBP10.05□□□□□ -0.8
CDH12P3-201ENST00000517935 PRDM2Q13029 1718 aa10.05□□□□□ -0.8
CDH12P3-201ENST00000517935 KDM6BO15054 1643 aa10.05□□□□□ -0.8
CDH12P3-201ENST00000517935 ILDR2Q71H61 639 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms