RNA–Protein interactions for RNA: ENST00000514315.2

HMGCR-212, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 3

Gene HMGCR, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-212ENST00000514315 SYNJ1O43426 1573 aa13.19□□□□□ -0.3
HMGCR-212ENST00000514315 MAGI1Q96QZ7 1491 aaPredicted RBP13.17□□□□□ -0.3
HMGCR-212ENST00000514315 GAPVD1Q14C86 1478 aa13.16□□□□□ -0.3
HMGCR-212ENST00000514315 WDR97A6NE52 1622 aa13.16□□□□□ -0.3
HMGCR-212ENST00000514315 SYNJ2O15056 1496 aa13.16□□□□□ -0.3
HMGCR-212ENST00000514315 CUX1P39880 1505 aa13.15□□□□□ -0.3
HMGCR-212ENST00000514315 GRIN2BQ13224 1484 aa13.15□□□□□ -0.3
HMGCR-212ENST00000514315 U3KPZ7 1027 aaPredicted RBP13.14□□□□□ -0.31
HMGCR-212ENST00000514315 ERCC6L2Q5T890 1561 aa13.14□□□□□ -0.31
HMGCR-212ENST00000514315 PBRM1Q86U86 1689 aa13.12□□□□□ -0.31
HMGCR-212ENST00000514315 KIF13AQ9H1H9 1805 aa13.09□□□□□ -0.31
HMGCR-212ENST00000514315 ABCA5Q8WWZ7 1642 aa13.03□□□□□ -0.32
HMGCR-212ENST00000514315 SLC4A2P04920 1241 aa13.03□□□□□ -0.32
HMGCR-212ENST00000514315 ABCA10Q8WWZ4 1543 aa13.02□□□□□ -0.33
HMGCR-212ENST00000514315 CEP170Q5SW79 1584 aa13.02□□□□□ -0.33
HMGCR-212ENST00000514315 SHROOM2Q13796 1616 aa13□□□□□ -0.33
HMGCR-212ENST00000514315 GRIN2AQ12879 1464 aa13□□□□□ -0.33
HMGCR-212ENST00000514315 NUP160Q12769 1436 aa12.98□□□□□ -0.33
HMGCR-212ENST00000514315 CAPN15O75808 1086 aa12.96□□□□□ -0.33
HMGCR-212ENST00000514315 KDM4FA0A1W2PPD8 638 aa12.95□□□□□ -0.34
HMGCR-212ENST00000514315 ADAMTS12P58397 1594 aa12.93□□□□□ -0.34
HMGCR-212ENST00000514315 APLP2Q06481 763 aa12.92□□□□□ -0.34
HMGCR-212ENST00000514315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.91□□□□□ -0.34
HMGCR-212ENST00000514315 HNRNPUL2Q1KMD3 747 aaKnown RBP12.91□□□□□ -0.34
HMGCR-212ENST00000514315 JPH4Q96JJ6 628 aa12.91□□□□□ -0.34
HMGCR-212ENST00000514315 SPINK5Q9NQ38 1064 aaPredicted RBP12.91□□□□□ -0.34
HMGCR-212ENST00000514315 FAM69CQ0P6D2 419 aa12.89□□□□□ -0.35
HMGCR-212ENST00000514315 FHAD1B1AJZ9 1412 aa12.88□□□□□ -0.35
HMGCR-212ENST00000514315 PRG4Q92954 1404 aaPredicted RBP12.88□□□□□ -0.35
HMGCR-212ENST00000514315 ILDR1Q86SU0 546 aaPredicted RBP12.88□□□□□ -0.35
HMGCR-212ENST00000514315 ABCC10Q5T3U5 1492 aa12.87□□□□□ -0.35
HMGCR-212ENST00000514315 WRNQ14191 1432 aaPredicted RBP eCLIP12.87□□□□□ -0.35
HMGCR-212ENST00000514315 TSPOAP1O95153 1857 aa12.85□□□□□ -0.35
HMGCR-212ENST00000514315 BIVM-ERCC5R4GMW8 1640 aa12.84□□□□□ -0.35
HMGCR-212ENST00000514315 TOP2BQ02880 1626 aa12.83□□□□□ -0.36
HMGCR-212ENST00000514315 ERICH3Q5RHP9 1530 aa12.83□□□□□ -0.36
HMGCR-212ENST00000514315 DIP2BQ9P265 1576 aa12.82□□□□□ -0.36
HMGCR-212ENST00000514315 DSG3P32926 999 aa12.82□□□□□ -0.36
HMGCR-212ENST00000514315 SAMD1Q6SPF0 538 aaPredicted RBP12.81□□□□□ -0.36
HMGCR-212ENST00000514315 MAPKBP1O60336 1514 aa12.81□□□□□ -0.36
HMGCR-212ENST00000514315 ADCY10Q96PN6 1610 aa12.8□□□□□ -0.36
HMGCR-212ENST00000514315 NPM1P06748 294 aaKnown RBP eCLIP12.79□□□□□ -0.36
HMGCR-212ENST00000514315 SLC4A1APQ9BWU0 796 aaKnown RBP12.78□□□□□ -0.36
HMGCR-212ENST00000514315 KDM6BO15054 1643 aa12.77□□□□□ -0.36
HMGCR-212ENST00000514315 ZNF219Q9P2Y4 722 aaPredicted RBP12.77□□□□□ -0.37
HMGCR-212ENST00000514315 RUSC2Q8N2Y8 1516 aa12.76□□□□□ -0.37
HMGCR-212ENST00000514315 PPRC1Q5VV67 1664 aaKnown RBP12.71□□□□□ -0.37
HMGCR-212ENST00000514315 SUPT5HO00267 1087 aaKnown RBP12.71□□□□□ -0.37
HMGCR-212ENST00000514315 MYCNP04198 464 aaPredicted RBP12.71□□□□□ -0.37
HMGCR-212ENST00000514315 KIAA0586Q9BVV6 1533 aa12.68□□□□□ -0.38
HMGCR-212ENST00000514315 COL17A1Q9UMD9 1497 aaPredicted RBP12.68□□□□□ -0.38
HMGCR-212ENST00000514315 IGF1RP08069 1367 aa12.68□□□□□ -0.38
HMGCR-212ENST00000514315 POTEHQ6S545 545 aa12.67□□□□□ -0.38
HMGCR-212ENST00000514315 PTPRGP23470 1445 aa12.63□□□□□ -0.39
HMGCR-212ENST00000514315 ADGRL1O94910 1474 aa12.63□□□□□ -0.39
HMGCR-212ENST00000514315 GLI2P10070 1586 aa12.62□□□□□ -0.39
HMGCR-212ENST00000514315 ABCB7O75027 752 aa12.61□□□□□ -0.39
HMGCR-212ENST00000514315 ASXL2Q76L83 1435 aa12.61□□□□□ -0.39
HMGCR-212ENST00000514315 TTBK1Q5TCY1 1321 aaPredicted RBP12.61□□□□□ -0.39
HMGCR-212ENST00000514315 CUL7Q14999 1698 aa12.61□□□□□ -0.39
HMGCR-212ENST00000514315 FOXD4L1Q9NU39 408 aa12.6□□□□□ -0.39
HMGCR-212ENST00000514315 ABCC2Q92887 1545 aa12.59□□□□□ -0.39
HMGCR-212ENST00000514315 HECW2Q9P2P5 1572 aa12.58□□□□□ -0.4
HMGCR-212ENST00000514315 PLB1Q6P1J6 1458 aa12.57□□□□□ -0.4
HMGCR-212ENST00000514315 TNIKQ9UKE5 1360 aa12.56□□□□□ -0.4
HMGCR-212ENST00000514315 MAP3K4Q9Y6R4 1608 aa12.56□□□□□ -0.4
HMGCR-212ENST00000514315 UHRF1BP1LA0JNW5 1464 aa12.54□□□□□ -0.4
HMGCR-212ENST00000514315 EPRSP07814 1512 aaKnown RBP12.53□□□□□ -0.4
HMGCR-212ENST00000514315 CARMIL1Q5VZK9 1371 aa12.53□□□□□ -0.4
HMGCR-212ENST00000514315 KIF27Q86VH2 1401 aa12.52□□□□□ -0.41
HMGCR-212ENST00000514315 UACAQ9BZF9 1416 aa12.52□□□□□ -0.41
HMGCR-212ENST00000514315 DISP1Q96F81 1524 aa12.52□□□□□ -0.41
HMGCR-212ENST00000514315 KDM5BQ9UGL1 1544 aa12.51□□□□□ -0.41
HMGCR-212ENST00000514315 CARMIL2Q6F5E8 1435 aa12.5□□□□□ -0.41
HMGCR-212ENST00000514315 ZCCHC11Q5TAX3 1644 aaKnown RBP12.48□□□□□ -0.41
HMGCR-212ENST00000514315 IQGAP2Q13576 1575 aa12.47□□□□□ -0.41
HMGCR-212ENST00000514315 TEX14Q8IWB6 1497 aa12.44□□□□□ -0.42
HMGCR-212ENST00000514315 FBXO41Q8TF61 875 aa12.43□□□□□ -0.42
HMGCR-212ENST00000514315 ZBTB22O15209 634 aa12.42□□□□□ -0.42
HMGCR-212ENST00000514315 POLA2Q14181 598 aa12.42□□□□□ -0.42
HMGCR-212ENST00000514315 UGGT2Q9NYU1 1516 aa12.42□□□□□ -0.42
HMGCR-212ENST00000514315 MAGI3Q5TCQ9 1506 aa12.39□□□□□ -0.43
HMGCR-212ENST00000514315 KCNH8Q96L42 1107 aa12.39□□□□□ -0.43
HMGCR-212ENST00000514315 KIF21BO75037 1637 aa12.39□□□□□ -0.43
HMGCR-212ENST00000514315 WDR7Q9Y4E6 1490 aa12.39□□□□□ -0.43
HMGCR-212ENST00000514315 CFAP43Q8NDM7 1665 aa12.38□□□□□ -0.43
HMGCR-212ENST00000514315 CD109Q6YHK3 1445 aa12.38□□□□□ -0.43
HMGCR-212ENST00000514315 KIAA0556O60303 1618 aa12.38□□□□□ -0.43
HMGCR-212ENST00000514315 ADAMTSL3P82987 1691 aa12.35□□□□□ -0.43
HMGCR-212ENST00000514315 RAPGEF2Q9Y4G8 1499 aa12.34□□□□□ -0.43
HMGCR-212ENST00000514315 ABCA8O94911 1581 aa12.33□□□□□ -0.44
HMGCR-212ENST00000514315 ARAP3Q8WWN8 1544 aa12.32□□□□□ -0.44
HMGCR-212ENST00000514315 RBM42Q9BTD8 480 aaKnown RBP12.32□□□□□ -0.44
HMGCR-212ENST00000514315 ATF5Q9Y2D1 282 aaPredicted RBP12.31□□□□□ -0.44
HMGCR-212ENST00000514315 PTPRMP28827 1452 aa12.31□□□□□ -0.44
HMGCR-212ENST00000514315 CTTNBP2Q8WZ74 1663 aa12.29□□□□□ -0.44
HMGCR-212ENST00000514315 RAPGEF3O95398 923 aa12.28□□□□□ -0.44
HMGCR-212ENST00000514315 ATP10BO94823 1461 aa12.26□□□□□ -0.45
HMGCR-212ENST00000514315 BCORL1Q5H9F3 1711 aa12.25□□□□□ -0.45
HMGCR-212ENST00000514315 ZBTB12Q9Y330 459 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms