RNA–Protein interactions for RNA: ENST00000513629.1

CDK7-210, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-210ENST00000513629 TRHP20396 242 aaPredicted RBP16.88■□□□□ 0.29
CDK7-210ENST00000513629 RIMBP3CA6NJZ7 1639 aa16.88■□□□□ 0.29
CDK7-210ENST00000513629 RIMBP3BA6NNM3 1639 aa16.88■□□□□ 0.29
CDK7-210ENST00000513629 RIMBP3Q9UFD9 1639 aa16.88■□□□□ 0.29
CDK7-210ENST00000513629 RAD54L2Q9Y4B4 1467 aa16.86■□□□□ 0.29
CDK7-210ENST00000513629 ARHGEF11O15085 1522 aa16.84■□□□□ 0.29
CDK7-210ENST00000513629 CHD1O14646 1710 aa16.83■□□□□ 0.28
CDK7-210ENST00000513629 SOGA1O94964 1423 aa16.83■□□□□ 0.28
CDK7-210ENST00000513629 FGD5Q6ZNL6 1462 aa16.83■□□□□ 0.28
CDK7-210ENST00000513629 CUX1P39880 1505 aa16.82■□□□□ 0.28
CDK7-210ENST00000513629 TDRD9Q8NDG6 1382 aaKnown RBP16.8■□□□□ 0.28
CDK7-210ENST00000513629 FBLN2P98095 1184 aa16.78■□□□□ 0.28
CDK7-210ENST00000513629 SUPT5HO00267 1087 aaKnown RBP16.77■□□□□ 0.28
CDK7-210ENST00000513629 SNAPC4Q5SXM2 1469 aa16.76■□□□□ 0.27
CDK7-210ENST00000513629 WDR97A6NE52 1622 aa16.76■□□□□ 0.27
CDK7-210ENST00000513629 GRIN2BQ13224 1484 aa16.69■□□□□ 0.26
CDK7-210ENST00000513629 MAGI1Q96QZ7 1491 aaPredicted RBP16.69■□□□□ 0.26
CDK7-210ENST00000513629 ARAP1Q96P48 1450 aa16.68■□□□□ 0.26
CDK7-210ENST00000513629 CYB5RLQ6IPT4 315 aa16.68■□□□□ 0.26
CDK7-210ENST00000513629 POLA2Q14181 598 aa16.67■□□□□ 0.26
CDK7-210ENST00000513629 CHMP7Q8WUX9 453 aaPredicted RBP16.65■□□□□ 0.26
CDK7-210ENST00000513629 CLASP1Q7Z460 1538 aa16.65■□□□□ 0.26
CDK7-210ENST00000513629 CACNB1Q02641 598 aaPredicted RBP16.64■□□□□ 0.25
CDK7-210ENST00000513629 SYNJ2O15056 1496 aa16.64■□□□□ 0.25
CDK7-210ENST00000513629 GAPVD1Q14C86 1478 aa16.64■□□□□ 0.25
CDK7-210ENST00000513629 SYNJ1O43426 1573 aa16.64■□□□□ 0.25
CDK7-210ENST00000513629 PBRM1Q86U86 1689 aa16.63■□□□□ 0.25
CDK7-210ENST00000513629 ABCA10Q8WWZ4 1543 aa16.62■□□□□ 0.25
CDK7-210ENST00000513629 ABCA5Q8WWZ7 1642 aa16.61■□□□□ 0.25
CDK7-210ENST00000513629 ABCB7O75027 752 aa16.61■□□□□ 0.25
CDK7-210ENST00000513629 DSG3P32926 999 aa16.57■□□□□ 0.24
CDK7-210ENST00000513629 WRNQ14191 1432 aaPredicted RBP eCLIP16.55■□□□□ 0.24
CDK7-210ENST00000513629 TOP2BQ02880 1626 aa16.54■□□□□ 0.24
CDK7-210ENST00000513629 BIVM-ERCC5R4GMW8 1640 aa16.54■□□□□ 0.24
CDK7-210ENST00000513629 FKBP8Q14318 412 aa16.51■□□□□ 0.23
CDK7-210ENST00000513629 ADAMTS12P58397 1594 aa16.51■□□□□ 0.23
CDK7-210ENST00000513629 MKRN4PQ13434 485 aaPredicted RBP16.5■□□□□ 0.23
CDK7-210ENST00000513629 GRIN2AQ12879 1464 aa16.48■□□□□ 0.23
CDK7-210ENST00000513629 CEP170Q5SW79 1584 aa16.43■□□□□ 0.22
CDK7-210ENST00000513629 FHAD1B1AJZ9 1412 aa16.43■□□□□ 0.22
CDK7-210ENST00000513629 NUP160Q12769 1436 aa16.43■□□□□ 0.22
CDK7-210ENST00000513629 ERICH3Q5RHP9 1530 aa16.41■□□□□ 0.22
CDK7-210ENST00000513629 ERCC6L2Q5T890 1561 aa16.4■□□□□ 0.22
CDK7-210ENST00000513629 ZBTB12Q9Y330 459 aaPredicted RBP16.4■□□□□ 0.22
CDK7-210ENST00000513629 SHROOM2Q13796 1616 aa16.34■□□□□ 0.21
CDK7-210ENST00000513629 RUSC2Q8N2Y8 1516 aa16.27■□□□□ 0.2
CDK7-210ENST00000513629 PRG4Q92954 1404 aaPredicted RBP16.26■□□□□ 0.19
CDK7-210ENST00000513629 SPDYE4A6NLX3 237 aa16.24■□□□□ 0.19
CDK7-210ENST00000513629 KIF27Q86VH2 1401 aa16.22■□□□□ 0.19
CDK7-210ENST00000513629 JPH4Q96JJ6 628 aa16.22■□□□□ 0.19
CDK7-210ENST00000513629 IGF1RP08069 1367 aa16.19■□□□□ 0.18
CDK7-210ENST00000513629 CUL7Q14999 1698 aa16.18■□□□□ 0.18
CDK7-210ENST00000513629 KIAA0586Q9BVV6 1533 aa16.14■□□□□ 0.18
CDK7-210ENST00000513629 CARMIL1Q5VZK9 1371 aa16.1■□□□□ 0.17
CDK7-210ENST00000513629 ADCY10Q96PN6 1610 aa16.09■□□□□ 0.17
CDK7-210ENST00000513629 KIF13AQ9H1H9 1805 aa16.09■□□□□ 0.17
CDK7-210ENST00000513629 MAPKBP1O60336 1514 aa16.05■□□□□ 0.16
CDK7-210ENST00000513629 NPM1P06748 294 aaKnown RBP eCLIP16.04■□□□□ 0.16
CDK7-210ENST00000513629 ABCC10Q5T3U5 1492 aa16.03■□□□□ 0.16
CDK7-210ENST00000513629 PROM2Q8N271 834 aa16.03■□□□□ 0.16
CDK7-210ENST00000513629 IQGAP2Q13576 1575 aa16.01■□□□□ 0.15
CDK7-210ENST00000513629 DIP2BQ9P265 1576 aa16.01■□□□□ 0.15
CDK7-210ENST00000513629 FAM69CQ0P6D2 419 aa16.01■□□□□ 0.15
CDK7-210ENST00000513629 TTBK1Q5TCY1 1321 aaPredicted RBP15.99■□□□□ 0.15
CDK7-210ENST00000513629 SPDYE2BA6NHP3 402 aa15.99■□□□□ 0.15
CDK7-210ENST00000513629 SPDYE6P0CI01 402 aa15.99■□□□□ 0.15
CDK7-210ENST00000513629 SPDYE2Q495Y8 402 aa15.99■□□□□ 0.15
CDK7-210ENST00000513629 PTPRGP23470 1445 aa15.99■□□□□ 0.15
CDK7-210ENST00000513629 CARMIL2Q6F5E8 1435 aa15.98■□□□□ 0.15
CDK7-210ENST00000513629 ZNF692Q9BU19 519 aaPredicted RBP15.97■□□□□ 0.15
CDK7-210ENST00000513629 TNIKQ9UKE5 1360 aa15.97■□□□□ 0.15
CDK7-210ENST00000513629 RAPGEF2Q9Y4G8 1499 aa15.96■□□□□ 0.14
CDK7-210ENST00000513629 DISP1Q96F81 1524 aa15.94■□□□□ 0.14
CDK7-210ENST00000513629 ABCC2Q92887 1545 aa15.93■□□□□ 0.14
CDK7-210ENST00000513629 SSUH2Q9Y2M2 353 aa15.92■□□□□ 0.14
CDK7-210ENST00000513629 UGGT2Q9NYU1 1516 aa15.9■□□□□ 0.14
CDK7-210ENST00000513629 UACAQ9BZF9 1416 aa15.88■□□□□ 0.13
CDK7-210ENST00000513629 KIAA0556O60303 1618 aa15.88■□□□□ 0.13
CDK7-210ENST00000513629 UHRF1BP1LA0JNW5 1464 aa15.88■□□□□ 0.13
CDK7-210ENST00000513629 TSPOAP1O95153 1857 aa15.88■□□□□ 0.13
CDK7-210ENST00000513629 KDM6BO15054 1643 aa15.87■□□□□ 0.13
CDK7-210ENST00000513629 ASXL2Q76L83 1435 aa15.87■□□□□ 0.13
CDK7-210ENST00000513629 PLB1Q6P1J6 1458 aa15.84■□□□□ 0.13
CDK7-210ENST00000513629 CTTNBP2Q8WZ74 1663 aa15.83■□□□□ 0.13
CDK7-210ENST00000513629 FBXO3Q9UK99 471 aa15.82■□□□□ 0.12
CDK7-210ENST00000513629 GLI2P10070 1586 aa15.81■□□□□ 0.12
CDK7-210ENST00000513629 KDM5BQ9UGL1 1544 aa15.81■□□□□ 0.12
CDK7-210ENST00000513629 ZCCHC11Q5TAX3 1644 aaKnown RBP15.8■□□□□ 0.12
CDK7-210ENST00000513629 PRXQ9BXM0 1461 aa15.8■□□□□ 0.12
CDK7-210ENST00000513629 PPRC1Q5VV67 1664 aaKnown RBP15.79■□□□□ 0.12
CDK7-210ENST00000513629 EPRSP07814 1512 aaKnown RBP15.78■□□□□ 0.12
CDK7-210ENST00000513629 GOLGA3Q08378 1498 aa15.77■□□□□ 0.11
CDK7-210ENST00000513629 RBM42Q9BTD8 480 aaKnown RBP15.75■□□□□ 0.11
CDK7-210ENST00000513629 MAP3K4Q9Y6R4 1608 aa15.74■□□□□ 0.11
CDK7-210ENST00000513629 WDR7Q9Y4E6 1490 aa15.72■□□□□ 0.11
CDK7-210ENST00000513629 ABCA8O94911 1581 aa15.72■□□□□ 0.11
CDK7-210ENST00000513629 TEX14Q8IWB6 1497 aa15.69■□□□□ 0.1
CDK7-210ENST00000513629 KDM4FA0A1W2PPD8 638 aa15.68■□□□□ 0.1
CDK7-210ENST00000513629 COL17A1Q9UMD9 1497 aaPredicted RBP15.67■□□□□ 0.1
CDK7-210ENST00000513629 VASPP50552 380 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms