RNA–Protein interactions for RNA: ENST00000512701.6

TTC39B-208, Transcript of tetratricopeptide repeat domain 39B, human

APPRIS P3 TSL 2 BASIC

Gene TTC39B, Length 10,483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC39B-208	ENST00000512701	DEK	P35659	375 aa	Known RBP	10.27	□□□□□ -0.77
TTC39B-208	ENST00000512701	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	10.26	□□□□□ -0.77	9e-8	■□□□□ 10.2
TTC39B-208	ENST00000512701	SPRYD3	Q8NCJ5	442 aa		10.26	□□□□□ -0.77
TTC39B-208	ENST00000512701	CSRNP3	Q8WYN3	585 aa		10.25	□□□□□ -0.77
TTC39B-208	ENST00000512701	B4GALNT3	Q6L9W6	998 aa		10.23	□□□□□ -0.77
TTC39B-208	ENST00000512701	TRIM44	Q96DX7	344 aa	Predicted RBP	10.23	□□□□□ -0.77
TTC39B-208	ENST00000512701	RGS3	P49796	1198 aa		10.23	□□□□□ -0.77
TTC39B-208	ENST00000512701	DCAF1	Q9Y4B6	1507 aa		10.21	□□□□□ -0.77
TTC39B-208	ENST00000512701	PTMA	P06454	111 aa	Known RBP	10.21	□□□□□ -0.77
TTC39B-208	ENST00000512701	NOP58	Q9Y2X3	529 aa	Known RBP	10.21	□□□□□ -0.77
TTC39B-208	ENST00000512701	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	10.21	□□□□□ -0.77
TTC39B-208	ENST00000512701	WDR43	Q15061	677 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
TTC39B-208	ENST00000512701	DNTTIP2	Q5QJE6	756 aa	Known RBP	10.2	□□□□□ -0.78
TTC39B-208	ENST00000512701	TULP1	O00294	542 aa	Predicted RBP	10.19	□□□□□ -0.78
TTC39B-208	ENST00000512701	PLCB2	Q00722	1185 aa		10.17	□□□□□ -0.78
TTC39B-208	ENST00000512701	RRP7BP	Q9NSQ0	103 aa		10.16	□□□□□ -0.78
TTC39B-208	ENST00000512701		A0A0G2JS52	829 aa		10.15	□□□□□ -0.78
TTC39B-208	ENST00000512701	ABCC9	O60706	1549 aa		10.15	□□□□□ -0.78
TTC39B-208	ENST00000512701	NEUROD2	Q15784	382 aa		10.15	□□□□□ -0.78
TTC39B-208	ENST00000512701	DDRGK1	Q96HY6	314 aa		10.15	□□□□□ -0.79
TTC39B-208	ENST00000512701	BECN1	Q14457	450 aa		10.13	□□□□□ -0.79
TTC39B-208	ENST00000512701	RBM19	Q9Y4C8	960 aa	Known RBP	10.13	□□□□□ -0.79
TTC39B-208	ENST00000512701	STAG3	Q9UJ98	1225 aa		10.11	□□□□□ -0.79
TTC39B-208	ENST00000512701	SIN3A	Q96ST3	1273 aa		10.1	□□□□□ -0.79
TTC39B-208	ENST00000512701	TNNT2	P45379	298 aa	Predicted RBP	10.1	□□□□□ -0.79
TTC39B-208	ENST00000512701	GZF1	Q9H116	711 aa	Predicted RBP	10.09	□□□□□ -0.79
TTC39B-208	ENST00000512701	MYH16	Q9H6N6	1097 aa		10.09	□□□□□ -0.79
TTC39B-208	ENST00000512701	FRAT1	Q92837	279 aa	Predicted RBP	10.08	□□□□□ -0.8
TTC39B-208	ENST00000512701	ERICH6B	Q5W0A0	696 aa		10.08	□□□□□ -0.8
TTC39B-208	ENST00000512701	RGL3	Q3MIN7	710 aa		10.07	□□□□□ -0.8
TTC39B-208	ENST00000512701	PPP4R2	Q9NY27	417 aa		10.06	□□□□□ -0.8
TTC39B-208	ENST00000512701	PPM1G	O15355	546 aa	Predicted RBP	10.05	□□□□□ -0.8
TTC39B-208	ENST00000512701	CC2D1B	Q5T0F9	858 aa	Known RBP	10.05	□□□□□ -0.8
TTC39B-208	ENST00000512701	TSHZ2	Q9NRE2	1034 aa		10.05	□□□□□ -0.8
TTC39B-208	ENST00000512701	CDK11B	P21127	795 aa	Known RBP	10.04	□□□□□ -0.8
TTC39B-208	ENST00000512701	GOLGA6L22	H0YM25	854 aa		10.04	□□□□□ -0.8
TTC39B-208	ENST00000512701	C14orf37	Q86TY3	774 aa		10.03	□□□□□ -0.8
TTC39B-208	ENST00000512701	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.03	□□□□□ -0.8
TTC39B-208	ENST00000512701	HSP90AB1	P08238	724 aa	Known RBP	10.02	□□□□□ -0.81
TTC39B-208	ENST00000512701	SLK	Q9H2G2	1235 aa	Predicted RBP	10.02	□□□□□ -0.81
TTC39B-208	ENST00000512701	FTSJ3	Q8IY81	847 aa	Known RBP	10.02	□□□□□ -0.81
TTC39B-208	ENST00000512701	FOXD4L1	Q9NU39	408 aa		9.99	□□□□□ -0.81
TTC39B-208	ENST00000512701	NAP1L2	Q9ULW6	460 aa	Predicted RBP	9.99	□□□□□ -0.81
TTC39B-208	ENST00000512701	APBB1	O00213	710 aa		9.98	□□□□□ -0.81
TTC39B-208	ENST00000512701	SCRIB	Q14160	1630 aa		9.98	□□□□□ -0.81
TTC39B-208	ENST00000512701	CCDC180	Q9P1Z9	1646 aa		9.98	□□□□□ -0.81
TTC39B-208	ENST00000512701	TIMELESS	Q9UNS1	1208 aa		9.96	□□□□□ -0.81
TTC39B-208	ENST00000512701	SLC4A3	P48751	1232 aa		9.96	□□□□□ -0.82
TTC39B-208	ENST00000512701	KCNH8	Q96L42	1107 aa		9.96	□□□□□ -0.82
TTC39B-208	ENST00000512701	ZRSR1	Q15695	479 aa	Known RBP	9.95	□□□□□ -0.82
TTC39B-208	ENST00000512701	CLIP1	P30622	1438 aa		9.95	□□□□□ -0.82
TTC39B-208	ENST00000512701	ESF1	Q9H501	851 aa	Known RBP	9.95	□□□□□ -0.82
TTC39B-208	ENST00000512701	MSN	P26038	577 aa	Known RBP	9.94	□□□□□ -0.82
TTC39B-208	ENST00000512701	BAZ1B	Q9UIG0	1483 aa	Known RBP	9.93	□□□□□ -0.82
TTC39B-208	ENST00000512701	NCBP3	Q53F19	620 aa	Known RBP	9.93	□□□□□ -0.82
TTC39B-208	ENST00000512701	DRC7	Q8IY82	874 aa		9.93	□□□□□ -0.82
TTC39B-208	ENST00000512701	MTUS2	Q5JR59	1369 aa		9.92	□□□□□ -0.82
TTC39B-208	ENST00000512701	CEP162	Q5TB80	1403 aa		9.92	□□□□□ -0.82
TTC39B-208	ENST00000512701	FOXD4L5	Q5VV16	416 aa	Predicted RBP	9.92	□□□□□ -0.82
TTC39B-208	ENST00000512701	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	9.92	□□□□□ -0.82
TTC39B-208	ENST00000512701	HSCB	Q8IWL3	235 aa		9.91	□□□□□ -0.82
TTC39B-208	ENST00000512701	CARD11	Q9BXL7	1154 aa		9.91	□□□□□ -0.82
TTC39B-208	ENST00000512701	CASC1	Q6TDU7	716 aa		9.9	□□□□□ -0.82
TTC39B-208	ENST00000512701	NOL8	Q76FK4	1167 aa	Known RBP	9.9	□□□□□ -0.82
TTC39B-208	ENST00000512701	FOXD1	Q16676	465 aa		9.9	□□□□□ -0.82
TTC39B-208	ENST00000512701	KNSTRN	Q9Y448	316 aa		9.9	□□□□□ -0.82
TTC39B-208	ENST00000512701	VSIG10	Q8N0Z9	540 aa		9.89	□□□□□ -0.83
TTC39B-208	ENST00000512701	SOX12	O15370	315 aa		9.89	□□□□□ -0.83
TTC39B-208	ENST00000512701	ZCCHC6	Q5VYS8	1495 aa	Known RBP	9.89	□□□□□ -0.83
TTC39B-208	ENST00000512701	U2SURP	O15042	1029 aa	Known RBP	9.88	□□□□□ -0.83
TTC39B-208	ENST00000512701	PDE4C	Q08493	712 aa		9.88	□□□□□ -0.83
TTC39B-208	ENST00000512701	ANO8	Q9HCE9	1232 aa	Predicted RBP	9.87	□□□□□ -0.83
TTC39B-208	ENST00000512701	L1TD1	Q5T7N2	865 aa	Known RBP	9.87	□□□□□ -0.83
TTC39B-208	ENST00000512701	OS9	Q13438	667 aa	Predicted RBP	9.87	□□□□□ -0.83
TTC39B-208	ENST00000512701	BCL11B	Q9C0K0	894 aa	Predicted RBP	9.87	□□□□□ -0.83
TTC39B-208	ENST00000512701	PNN	Q9H307	717 aa	Known RBP	9.87	□□□□□ -0.83
TTC39B-208	ENST00000512701	FGD1	P98174	961 aa		9.86	□□□□□ -0.83
TTC39B-208	ENST00000512701	KCNJ4	P48050	445 aa		9.85	□□□□□ -0.83
TTC39B-208	ENST00000512701	MFAP1	P55081	439 aa	Known RBP	9.85	□□□□□ -0.83
TTC39B-208	ENST00000512701	SAFB2	Q14151	953 aa	Known RBP eCLIP	9.85	□□□□□ -0.83
TTC39B-208	ENST00000512701	CHAF1A	Q13111	956 aa	Predicted RBP	9.84	□□□□□ -0.83
TTC39B-208	ENST00000512701	HSPA5	P11021	654 aa	Known RBP	9.83	□□□□□ -0.84
TTC39B-208	ENST00000512701	TSPY4	P0CV99	314 aa		9.83	□□□□□ -0.84
TTC39B-208	ENST00000512701	TSPY10	P0CW01	314 aa		9.83	□□□□□ -0.84
TTC39B-208	ENST00000512701	PPP1R15A	O75807	674 aa	Predicted RBP	9.83	□□□□□ -0.84
TTC39B-208	ENST00000512701	MAPK8IP3	Q9UPT6	1336 aa		9.83	□□□□□ -0.84
TTC39B-208	ENST00000512701	GOLGA6L4	A6NEF3	574 aa		9.82	□□□□□ -0.84
TTC39B-208	ENST00000512701	CLSTN1	O94985	981 aa		9.82	□□□□□ -0.84
TTC39B-208	ENST00000512701	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	9.82	□□□□□ -0.84
TTC39B-208	ENST00000512701	FOXD4L3	Q6VB84	417 aa	Predicted RBP	9.82	□□□□□ -0.84
TTC39B-208	ENST00000512701	CFAP53	Q96M91	514 aa		9.82	□□□□□ -0.84
TTC39B-208	ENST00000512701	LMOD2	Q6P5Q4	547 aa		9.81	□□□□□ -0.84
TTC39B-208	ENST00000512701	IPO9	Q96P70	1041 aa	Known RBP	9.81	□□□□□ -0.84
TTC39B-208	ENST00000512701	GOLGA6L3	A6NEY3	463 aa		9.8	□□□□□ -0.84
TTC39B-208	ENST00000512701	CCDC146	Q8IYE0	955 aa		9.8	□□□□□ -0.84
TTC39B-208	ENST00000512701		A0A0U1RQG5	324 aa	Predicted RBP	9.8	□□□□□ -0.84
TTC39B-208	ENST00000512701	GOLGA6L6	A8MZA4	724 aa		9.8	□□□□□ -0.84
TTC39B-208	ENST00000512701	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	9.79	□□□□□ -0.84
TTC39B-208	ENST00000512701	PLIN1	O60240	522 aa		9.79	□□□□□ -0.84
TTC39B-208	ENST00000512701	HSP90AA2P	Q14568	343 aa	Predicted RBP	9.79	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms