RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 EIF4G1Q04637 1599 aaKnown RBP6.71□□□□□ -1.33
PTPN13-209ENST00000511467 THOC2Q8NI27 1593 aaKnown RBP6.71□□□□□ -1.34
PTPN13-209ENST00000511467 ANP32CO43423 234 aa6.71□□□□□ -1.34
PTPN13-209ENST00000511467 KANK1Q14678 1352 aa6.71□□□□□ -1.34
PTPN13-209ENST00000511467 TOP2BQ02880 1626 aa6.7□□□□□ -1.34
PTPN13-209ENST00000511467 BIVM-ERCC5R4GMW8 1640 aa6.7□□□□□ -1.34
PTPN13-209ENST00000511467 NEUROD1Q13562 356 aa6.7□□□□□ -1.34
PTPN13-209ENST00000511467 TSPY4P0CV99 314 aa6.69□□□□□ -1.34
PTPN13-209ENST00000511467 TSPY10P0CW01 314 aa6.69□□□□□ -1.34
PTPN13-209ENST00000511467 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.69□□□□□ -1.34
PTPN13-209ENST00000511467 TONSLQ96HA7 1378 aa6.69□□□□□ -1.34
PTPN13-209ENST00000511467 HRCP23327 699 aa6.69□□□□□ -1.34
PTPN13-209ENST00000511467 NCAPD3P42695 1498 aa6.68□□□□□ -1.34
PTPN13-209ENST00000511467 HECW1Q76N89 1606 aa6.68□□□□□ -1.34
PTPN13-209ENST00000511467 UACAQ9BZF9 1416 aa6.68□□□□□ -1.34
PTPN13-209ENST00000511467 DNMBPQ6XZF7 1577 aa6.68□□□□□ -1.34
PTPN13-209ENST00000511467 CACNA1FO60840 1977 aa6.67□□□□□ -1.34
PTPN13-209ENST00000511467 SETD5Q9C0A6 1442 aa6.66□□□□□ -1.34
PTPN13-209ENST00000511467 PLEKHH2Q8IVE3 1493 aa6.66□□□□□ -1.34
PTPN13-209ENST00000511467 CFAP74Q9C0B2 1584 aa6.66□□□□□ -1.34
PTPN13-209ENST00000511467 ARHGAP35Q9NRY4 1499 aa6.66□□□□□ -1.34
PTPN13-209ENST00000511467 MS4A1P11836 297 aa6.65□□□□□ -1.34
PTPN13-209ENST00000511467 CHMP7Q8WUX9 453 aaPredicted RBP6.65□□□□□ -1.35
PTPN13-209ENST00000511467 NESP48681 1621 aa6.65□□□□□ -1.35
PTPN13-209ENST00000511467 MAP3K1Q13233 1512 aa6.64□□□□□ -1.35
PTPN13-209ENST00000511467 PBRM1Q86U86 1689 aa6.64□□□□□ -1.35
PTPN13-209ENST00000511467 ATAD2BQ9ULI0 1458 aa6.64□□□□□ -1.35
PTPN13-209ENST00000511467 UPF2Q9HAU5 1272 aaKnown RBP6.63□□□□□ -1.35
PTPN13-209ENST00000511467 PHLDB1Q86UU1 1377 aa6.63□□□□□ -1.35
PTPN13-209ENST00000511467 ZNF316A6NFI3 1004 aaPredicted RBP6.63□□□□□ -1.35
PTPN13-209ENST00000511467 VPS8Q8N3P4 1428 aa6.63□□□□□ -1.35
PTPN13-209ENST00000511467 EIF3AQ14152 1382 aaKnown RBP6.63□□□□□ -1.35
PTPN13-209ENST00000511467 FAM50AQ14320 339 aaKnown RBP6.62□□□□□ -1.35
PTPN13-209ENST00000511467 CADPSQ9ULU8 1353 aa6.62□□□□□ -1.35
PTPN13-209ENST00000511467 RTL5Q5HYW3 569 aaPredicted RBP6.62□□□□□ -1.35
PTPN13-209ENST00000511467 RAPGEF2Q9Y4G8 1499 aa6.62□□□□□ -1.35
PTPN13-209ENST00000511467 PLEKHD1A6NEE1 506 aa6.62□□□□□ -1.35
PTPN13-209ENST00000511467 NGEFQ8N5V2 710 aa6.62□□□□□ -1.35
PTPN13-209ENST00000511467 ROCK2O75116 1388 aaKnown RBP6.61□□□□□ -1.35
PTPN13-209ENST00000511467 PLPPR3Q6T4P5 718 aa6.61□□□□□ -1.35
PTPN13-209ENST00000511467 CCDC88BA6NC98 1476 aa6.61□□□□□ -1.35
PTPN13-209ENST00000511467 PABPN1Q86U42 306 aaKnown RBP eCLIP6.6□□□□□ -1.35
PTPN13-209ENST00000511467 MROH2BQ7Z745 1585 aa6.6□□□□□ -1.35
PTPN13-209ENST00000511467 HDAC5Q9UQL6 1122 aa6.6□□□□□ -1.35
PTPN13-209ENST00000511467 FYCO1Q9BQS8 1478 aa6.6□□□□□ -1.35
PTPN13-209ENST00000511467 SETD1BQ9UPS6 1966 aaKnown RBP6.59□□□□□ -1.35
PTPN13-209ENST00000511467 ERICH6BQ5W0A0 696 aa6.59□□□□□ -1.35
PTPN13-209ENST00000511467 ANP32BQ92688 251 aaKnown RBP6.59□□□□□ -1.35
PTPN13-209ENST00000511467 WWC1Q8IX03 1113 aa6.59□□□□□ -1.35
PTPN13-209ENST00000511467 ADGBQ8N7X0 1667 aa6.59□□□□□ -1.36
PTPN13-209ENST00000511467 EIF4G2P78344 907 aaKnown RBP eCLIP6.58□□□□□ -1.36
PTPN13-209ENST00000511467 TRIM52Q96A61 297 aa6.58□□□□□ -1.36
PTPN13-209ENST00000511467 DIEXFQ68CQ4 756 aaKnown RBP6.58□□□□□ -1.36
PTPN13-209ENST00000511467 EHBP1L1Q8N3D4 1523 aa6.57□□□□□ -1.36
PTPN13-209ENST00000511467 IFT140Q96RY7 1462 aa6.57□□□□□ -1.36
PTPN13-209ENST00000511467 CECR2Q9BXF3 1484 aa6.57□□□□□ -1.36
PTPN13-209ENST00000511467 SYNJ1O43426 1573 aa6.57□□□□□ -1.36
PTPN13-209ENST00000511467 CUX2O14529 1486 aa6.57□□□□□ -1.36
PTPN13-209ENST00000511467 CARMIL1Q5VZK9 1371 aa6.57□□□□□ -1.36
PTPN13-209ENST00000511467 MAGI1Q96QZ7 1491 aaPredicted RBP6.56□□□□□ -1.36
PTPN13-209ENST00000511467 FANCD2Q9BXW9 1451 aa6.56□□□□□ -1.36
PTPN13-209ENST00000511467 CALD1Q05682 793 aaKnown RBP6.55□□□□□ -1.36
PTPN13-209ENST00000511467 AQRO60306 1485 aaKnown RBP eCLIP6.55□□□□□ -1.36
PTPN13-209ENST00000511467 KTN1Q86UP2 1357 aaKnown RBP6.55□□□□□ -1.36
PTPN13-209ENST00000511467 KIF1BO60333 1816 aa6.55□□□□□ -1.36
PTPN13-209ENST00000511467 CFTRP13569 1480 aa6.55□□□□□ -1.36
PTPN13-209ENST00000511467 SOGA1O94964 1423 aa6.55□□□□□ -1.36
PTPN13-209ENST00000511467 CCNB3Q8WWL7 1395 aa6.55□□□□□ -1.36
PTPN13-209ENST00000511467 MRC2Q9UBG0 1479 aa6.55□□□□□ -1.36
PTPN13-209ENST00000511467 GRIN2BQ13224 1484 aa6.54□□□□□ -1.36
PTPN13-209ENST00000511467 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.54□□□□□ -1.36
PTPN13-209ENST00000511467 PTMSP20962 102 aa6.54□□□□□ -1.36
PTPN13-209ENST00000511467 CFAP53Q96M91 514 aa6.54□□□□□ -1.36
PTPN13-209ENST00000511467 CHMP4CQ96CF2 233 aa6.53□□□□□ -1.36
PTPN13-209ENST00000511467 KIF14Q15058 1648 aa6.53□□□□□ -1.36
PTPN13-209ENST00000511467 MYH16Q9H6N6 1097 aa6.53□□□□□ -1.36
PTPN13-209ENST00000511467 CFAP43Q8NDM7 1665 aa6.53□□□□□ -1.36
PTPN13-209ENST00000511467 GAPVD1Q14C86 1478 aa6.53□□□□□ -1.36
PTPN13-209ENST00000511467 ANKRD30AQ9BXX3 1397 aa6.52□□□□□ -1.37
PTPN13-209ENST00000511467 STAG3Q9UJ98 1225 aa6.52□□□□□ -1.37
PTPN13-209ENST00000511467 IQGAP2Q13576 1575 aa6.52□□□□□ -1.37
PTPN13-209ENST00000511467 MYO5CQ9NQX4 1742 aa6.52□□□□□ -1.37
PTPN13-209ENST00000511467 ANP32AP39687 249 aaKnown RBP6.51□□□□□ -1.37
PTPN13-209ENST00000511467 DAPK1P53355 1430 aa6.51□□□□□ -1.37
PTPN13-209ENST00000511467 AAMPQ13685 434 aa6.5□□□□□ -1.37
PTPN13-209ENST00000511467 CFAP65Q6ZU64 1925 aaKnown RBP6.5□□□□□ -1.37
PTPN13-209ENST00000511467 IL27Q8NEV9 243 aa6.5□□□□□ -1.37
PTPN13-209ENST00000511467 SNAPC4Q5SXM2 1469 aa6.5□□□□□ -1.37
PTPN13-209ENST00000511467 CANXP27824 592 aaKnown RBP6.49□□□□□ -1.37
PTPN13-209ENST00000511467 FBLN2P98095 1184 aa6.49□□□□□ -1.37
PTPN13-209ENST00000511467 POLR1AO95602 1720 aaPredicted RBP6.49□□□□□ -1.37
PTPN13-209ENST00000511467 SYNJ2O15056 1496 aa6.49□□□□□ -1.37
PTPN13-209ENST00000511467 EIF2AK4Q9P2K8 1649 aaKnown RBP6.49□□□□□ -1.37
PTPN13-209ENST00000511467 CASC1Q6TDU7 716 aa6.48□□□□□ -1.37
PTPN13-209ENST00000511467 DDRGK1Q96HY6 314 aa6.48□□□□□ -1.37
PTPN13-209ENST00000511467 GCC2Q8IWJ2 1684 aa6.48□□□□□ -1.37
PTPN13-209ENST00000511467 RANGAP1P46060 587 aaPredicted RBP6.48□□□□□ -1.37
PTPN13-209ENST00000511467 MYOM3Q5VTT5 1437 aa6.47□□□□□ -1.37
PTPN13-209ENST00000511467 BICRAQ9NZM4 1560 aa6.47□□□□□ -1.37
PTPN13-209ENST00000511467 NPM2Q86SE8 214 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms