RNA–Protein interactions for RNA: ENST00000511155.1

XPC-207, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 4

Gene XPC, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-207ENST00000511155 GRIN2BQ13224 1484 aa13.2□□□□□ -0.3
XPC-207ENST00000511155 MAPKBP1O60336 1514 aa13.18□□□□□ -0.3
XPC-207ENST00000511155 TOP2AP11388 1531 aaKnown RBP13.15□□□□□ -0.3
XPC-207ENST00000511155 SPATA31D1Q6ZQQ2 1576 aa13.15□□□□□ -0.3
XPC-207ENST00000511155 WDR97A6NE52 1622 aa13.14□□□□□ -0.31
XPC-207ENST00000511155 COL17A1Q9UMD9 1497 aaPredicted RBP13.13□□□□□ -0.31
XPC-207ENST00000511155 SHROOM2Q13796 1616 aa13.13□□□□□ -0.31
XPC-207ENST00000511155 NPM1P06748 294 aaKnown RBP eCLIP13.09□□□□□ -0.31
XPC-207ENST00000511155 PBRM1Q86U86 1689 aa13.08□□□□□ -0.31
XPC-207ENST00000511155 CCDC88BA6NC98 1476 aa13.08□□□□□ -0.32
XPC-207ENST00000511155 FGD5Q6ZNL6 1462 aa13.08□□□□□ -0.32
XPC-207ENST00000511155 PPRC1Q5VV67 1664 aaKnown RBP13.08□□□□□ -0.32
XPC-207ENST00000511155 CERKQ8TCT0 537 aa13.07□□□□□ -0.32
XPC-207ENST00000511155 PCGF6Q9BYE7 350 aa13.07□□□□□ -0.32
XPC-207ENST00000511155 NUP160Q12769 1436 aa13.06□□□□□ -0.32
XPC-207ENST00000511155 GRIN2AQ12879 1464 aa13.06□□□□□ -0.32
XPC-207ENST00000511155 TTBK1Q5TCY1 1321 aaPredicted RBP13.06□□□□□ -0.32
XPC-207ENST00000511155 ADCY10Q96PN6 1610 aa13.06□□□□□ -0.32
XPC-207ENST00000511155 PRG4Q92954 1404 aaPredicted RBP13.04□□□□□ -0.32
XPC-207ENST00000511155 TOP2BQ02880 1626 aa13.02□□□□□ -0.33
XPC-207ENST00000511155 TRIM26Q12899 539 aaPredicted RBP12.94□□□□□ -0.34
XPC-207ENST00000511155 PPARGC1BQ86YN6 1023 aaKnown RBP12.94□□□□□ -0.34
XPC-207ENST00000511155 JPH4Q96JJ6 628 aa12.94□□□□□ -0.34
XPC-207ENST00000511155 ABCA5Q8WWZ7 1642 aa12.92□□□□□ -0.34
XPC-207ENST00000511155 PCF11O94913 1555 aaKnown RBP12.91□□□□□ -0.34
XPC-207ENST00000511155 CUX1P39880 1505 aa12.91□□□□□ -0.34
XPC-207ENST00000511155 PTPRMP28827 1452 aa12.91□□□□□ -0.34
XPC-207ENST00000511155 ADAMTS12P58397 1594 aa12.9□□□□□ -0.34
XPC-207ENST00000511155 HSPA2P54652 639 aa12.89□□□□□ -0.35
XPC-207ENST00000511155 GLI2P10070 1586 aa12.89□□□□□ -0.35
XPC-207ENST00000511155 SCAF1Q9H7N4 1312 aaKnown RBP12.88□□□□□ -0.35
XPC-207ENST00000511155 KIF21BO75037 1637 aa12.85□□□□□ -0.35
XPC-207ENST00000511155 ABCA10Q8WWZ4 1543 aa12.83□□□□□ -0.35
XPC-207ENST00000511155 ASXL2Q76L83 1435 aa12.83□□□□□ -0.36
XPC-207ENST00000511155 SUPT5HO00267 1087 aaKnown RBP12.83□□□□□ -0.36
XPC-207ENST00000511155 ADAMTSL3P82987 1691 aa12.8□□□□□ -0.36
XPC-207ENST00000511155 PLPPR3Q6T4P5 718 aa12.8□□□□□ -0.36
XPC-207ENST00000511155 MAP3K4Q9Y6R4 1608 aa12.8□□□□□ -0.36
XPC-207ENST00000511155 FHAD1B1AJZ9 1412 aa12.79□□□□□ -0.36
XPC-207ENST00000511155 FOXD1Q16676 465 aa12.79□□□□□ -0.36
XPC-207ENST00000511155 PLB1Q6P1J6 1458 aa12.78□□□□□ -0.36
XPC-207ENST00000511155 TEX14Q8IWB6 1497 aa12.77□□□□□ -0.37
XPC-207ENST00000511155 EPRSP07814 1512 aaKnown RBP12.75□□□□□ -0.37
XPC-207ENST00000511155 RUSC2Q8N2Y8 1516 aa12.75□□□□□ -0.37
XPC-207ENST00000511155 CENPBP07199 599 aaPredicted RBP12.74□□□□□ -0.37
XPC-207ENST00000511155 ABCC2Q92887 1545 aa12.73□□□□□ -0.37
XPC-207ENST00000511155 ACIN1Q9UKV3 1341 aaKnown RBP12.71□□□□□ -0.37
XPC-207ENST00000511155 CUL7Q14999 1698 aa12.7□□□□□ -0.38
XPC-207ENST00000511155 MADDQ8WXG6 1647 aa12.7□□□□□ -0.38
XPC-207ENST00000511155 PTPRGP23470 1445 aa12.66□□□□□ -0.38
XPC-207ENST00000511155 KIAA0586Q9BVV6 1533 aa12.64□□□□□ -0.39
XPC-207ENST00000511155 BCORL1Q5H9F3 1711 aa12.64□□□□□ -0.39
XPC-207ENST00000511155 ERICH3Q5RHP9 1530 aa12.62□□□□□ -0.39
XPC-207ENST00000511155 RIMS1Q86UR5 1692 aaKnown RBP12.61□□□□□ -0.39
XPC-207ENST00000511155 MED1Q15648 1581 aaPredicted RBP12.59□□□□□ -0.39
XPC-207ENST00000511155 MAGI3Q5TCQ9 1506 aa12.57□□□□□ -0.4
XPC-207ENST00000511155 STRCQ7RTU9 1775 aa12.57□□□□□ -0.4
XPC-207ENST00000511155 UHRF1BP1LA0JNW5 1464 aa12.57□□□□□ -0.4
XPC-207ENST00000511155 LTBP4Q8N2S1 1624 aa12.55□□□□□ -0.4
XPC-207ENST00000511155 CD109Q6YHK3 1445 aa12.55□□□□□ -0.4
XPC-207ENST00000511155 KDM5BQ9UGL1 1544 aa12.55□□□□□ -0.4
XPC-207ENST00000511155 ARID4BQ4LE39 1312 aaPredicted RBP12.55□□□□□ -0.4
XPC-207ENST00000511155 WRNQ14191 1432 aaPredicted RBP eCLIP12.54□□□□□ -0.4
XPC-207ENST00000511155 YEATS2Q9ULM3 1422 aa12.54□□□□□ -0.4
XPC-207ENST00000511155 ZCCHC11Q5TAX3 1644 aaKnown RBP12.53□□□□□ -0.4
XPC-207ENST00000511155 TNIKQ9UKE5 1360 aa12.53□□□□□ -0.4
XPC-207ENST00000511155 UACAQ9BZF9 1416 aa12.53□□□□□ -0.4
XPC-207ENST00000511155 ARAP3Q8WWN8 1544 aa12.51□□□□□ -0.41
XPC-207ENST00000511155 DMRT2Q9Y5R5 561 aa12.5□□□□□ -0.41
XPC-207ENST00000511155 IQSEC2Q5JU85 1478 aa12.49□□□□□ -0.41
XPC-207ENST00000511155 WDR7Q9Y4E6 1490 aa12.49□□□□□ -0.41
XPC-207ENST00000511155 CLSPNQ9HAW4 1339 aa12.49□□□□□ -0.41
XPC-207ENST00000511155 RAPGEF3O95398 923 aa12.48□□□□□ -0.41
XPC-207ENST00000511155 CFAP43Q8NDM7 1665 aa12.48□□□□□ -0.41
XPC-207ENST00000511155 UBAP1LF5GYI3 381 aa12.47□□□□□ -0.41
XPC-207ENST00000511155 KCNH8Q96L42 1107 aa12.47□□□□□ -0.41
XPC-207ENST00000511155 GTF3C3Q9Y5Q9 886 aa12.47□□□□□ -0.41
XPC-207ENST00000511155 HSPA1LP34931 641 aa12.45□□□□□ -0.42
XPC-207ENST00000511155 NEUROD1Q13562 356 aa12.45□□□□□ -0.42
XPC-207ENST00000511155 PTPRTO14522 1441 aa12.43□□□□□ -0.42
XPC-207ENST00000511155 CARMIL2Q6F5E8 1435 aa12.41□□□□□ -0.42
XPC-207ENST00000511155 PREX1Q8TCU6 1659 aa12.41□□□□□ -0.42
XPC-207ENST00000511155 SIGLEC1Q9BZZ2 1709 aa12.4□□□□□ -0.42
XPC-207ENST00000511155 FRMPD1Q5SYB0 1578 aa12.39□□□□□ -0.43
XPC-207ENST00000511155 CEBPAP49715 358 aaPredicted RBP12.38□□□□□ -0.43
XPC-207ENST00000511155 SRCAPQ6ZRS2 3230 aa12.37□□□□□ -0.43
XPC-207ENST00000511155 RGS17Q9UGC6 210 aaPredicted RBP12.37□□□□□ -0.43
XPC-207ENST00000511155 DISP1Q96F81 1524 aa12.37□□□□□ -0.43
XPC-207ENST00000511155 TTC37Q6PGP7 1564 aa12.36□□□□□ -0.43
XPC-207ENST00000511155 LOC105371045A0A1W2PR82 267 aa12.36□□□□□ -0.43
XPC-207ENST00000511155 MLECQ14165 292 aa12.35□□□□□ -0.43
XPC-207ENST00000511155 DIEXFQ68CQ4 756 aaKnown RBP12.35□□□□□ -0.43
XPC-207ENST00000511155 BIVM-ERCC5R4GMW8 1640 aa12.35□□□□□ -0.43
XPC-207ENST00000511155 FER1L4A9Z1Z3 1794 aa12.33□□□□□ -0.44
XPC-207ENST00000511155 ARHGEF40Q8TER5 1519 aa12.32□□□□□ -0.44
XPC-207ENST00000511155 ZNF335Q9H4Z2 1342 aaPredicted RBP12.32□□□□□ -0.44
XPC-207ENST00000511155 PIP4K2BP78356 416 aa12.3□□□□□ -0.44
XPC-207ENST00000511155 PHLDB1Q86UU1 1377 aa12.29□□□□□ -0.44
XPC-207ENST00000511155 UHRF1BP1Q6BDS2 1440 aa12.28□□□□□ -0.44
XPC-207ENST00000511155 POGZQ7Z3K3 1410 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms