RNA–Protein interactions for RNA: ENST00000511155.1

XPC-207, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 4

Gene XPC, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-207ENST00000511155 NISCHQ9Y2I1 1504 aa17.72■□□□□ 0.43
XPC-207ENST00000511155 DNAJC5BQ9UF47 199 aa17.54■□□□□ 0.4
XPC-207ENST00000511155 ABCC9O60706 1549 aa17.52■□□□□ 0.39
XPC-207ENST00000511155 DNAJC5Q9H3Z4 198 aa16.79■□□□□ 0.28
XPC-207ENST00000511155 CCDC180Q9P1Z9 1646 aa16.29■□□□□ 0.2
XPC-207ENST00000511155 AEBP2Q6ZN18 517 aaPredicted RBP16.21■□□□□ 0.19
XPC-207ENST00000511155 PABPN1Q86U42 306 aaKnown RBP eCLIP16.18■□□□□ 0.18
XPC-207ENST00000511155 RB1CC1Q8TDY2 1594 aa16.06■□□□□ 0.16
XPC-207ENST00000511155 CECR2Q9BXF3 1484 aa15.85■□□□□ 0.13
XPC-207ENST00000511155 CHIC1Q5VXU3 224 aa15.8■□□□□ 0.12
XPC-207ENST00000511155 UNC13AQ9UPW8 1703 aa15.79■□□□□ 0.12
XPC-207ENST00000511155 BICRAQ9NZM4 1560 aa15.76■□□□□ 0.11
XPC-207ENST00000511155 CC2D2AQ9P2K1 1620 aa15.73■□□□□ 0.11
XPC-207ENST00000511155 NACADO15069 1562 aa15.68■□□□□ 0.1
XPC-207ENST00000511155 TRIM41Q8WV44 630 aa15.61■□□□□ 0.09
XPC-207ENST00000511155 DCAF8L2P0C7V8 631 aa15.49■□□□□ 0.07
XPC-207ENST00000511155 CUX2O14529 1486 aa15.44■□□□□ 0.06
XPC-207ENST00000511155 EIF4G1Q04637 1599 aaKnown RBP15.41■□□□□ 0.06
XPC-207ENST00000511155 SHROOM4Q9ULL8 1493 aa15.23■□□□□ 0.03
XPC-207ENST00000511155 ERCC6Q03468 1493 aa15.11■□□□□ 0.01
XPC-207ENST00000511155 MYO15BQ96JP2 1530 aa15.07■□□□□ 0
XPC-207ENST00000511155 SCRIBQ14160 1630 aa14.89□□□□□ -0.03
XPC-207ENST00000511155 NESP48681 1621 aa14.77□□□□□ -0.05
XPC-207ENST00000511155 THOC2Q8NI27 1593 aaKnown RBP14.77□□□□□ -0.05
XPC-207ENST00000511155 ILDR1Q86SU0 546 aaPredicted RBP14.6□□□□□ -0.07
XPC-207ENST00000511155 OSCARQ8IYS5 282 aa14.59□□□□□ -0.07
XPC-207ENST00000511155 SMARCA2P51531 1590 aa14.57□□□□□ -0.08
XPC-207ENST00000511155 BAZ1AQ9NRL2 1556 aaPredicted RBP14.57□□□□□ -0.08
XPC-207ENST00000511155 RIMBP3CA6NJZ7 1639 aa14.56□□□□□ -0.08
XPC-207ENST00000511155 RIMBP3BA6NNM3 1639 aa14.56□□□□□ -0.08
XPC-207ENST00000511155 RIMBP3Q9UFD9 1639 aa14.56□□□□□ -0.08
XPC-207ENST00000511155 NCAPD3P42695 1498 aa14.55□□□□□ -0.08
XPC-207ENST00000511155 TRHP20396 242 aaPredicted RBP14.54□□□□□ -0.08
XPC-207ENST00000511155 DCAF1Q9Y4B6 1507 aa14.5□□□□□ -0.09
XPC-207ENST00000511155 KIF21AQ7Z4S6 1674 aa14.48□□□□□ -0.09
XPC-207ENST00000511155 ZCCHC6Q5VYS8 1495 aaKnown RBP14.44□□□□□ -0.1
XPC-207ENST00000511155 ARHGEF11O15085 1522 aa14.39□□□□□ -0.11
XPC-207ENST00000511155 CYB5RLQ6IPT4 315 aa14.38□□□□□ -0.11
XPC-207ENST00000511155 ATAD2BQ9ULI0 1458 aa14.37□□□□□ -0.11
XPC-207ENST00000511155 LAMC3Q9Y6N6 1575 aa14.34□□□□□ -0.11
XPC-207ENST00000511155 PDS5BQ9NTI5 1447 aa14.29□□□□□ -0.12
XPC-207ENST00000511155 WDR62O43379 1518 aa14.29□□□□□ -0.12
XPC-207ENST00000511155 HMGXB3Q12766 1538 aa14.28□□□□□ -0.12
XPC-207ENST00000511155 MRC2Q9UBG0 1479 aa14.27□□□□□ -0.12
XPC-207ENST00000511155 ARAP1Q96P48 1450 aa14.19□□□□□ -0.14
XPC-207ENST00000511155 BAZ1BQ9UIG0 1483 aaKnown RBP14.12□□□□□ -0.15
XPC-207ENST00000511155 SMARCA4P51532 1647 aa14.05□□□□□ -0.16
XPC-207ENST00000511155 CADPSQ9ULU8 1353 aa14.05□□□□□ -0.16
XPC-207ENST00000511155 PELP1Q8IZL8 1130 aaKnown RBP14.03□□□□□ -0.16
XPC-207ENST00000511155 CEP164Q9UPV0 1460 aa13.98□□□□□ -0.17
XPC-207ENST00000511155 ZNF608Q9ULD9 1512 aaPredicted RBP13.94□□□□□ -0.18
XPC-207ENST00000511155 KDM4FA0A1W2PPD8 638 aa13.91□□□□□ -0.18
XPC-207ENST00000511155 URB2Q14146 1524 aaKnown RBP13.9□□□□□ -0.18
XPC-207ENST00000511155 FANCD2Q9BXW9 1451 aa13.9□□□□□ -0.18
XPC-207ENST00000511155 PEG3Q9GZU2 1588 aa13.9□□□□□ -0.18
XPC-207ENST00000511155 RSF1Q96T23 1441 aaPredicted RBP13.89□□□□□ -0.19
XPC-207ENST00000511155 PHF23Q9BUL5 403 aaPredicted RBP13.87□□□□□ -0.19
XPC-207ENST00000511155 CHD1O14646 1710 aa13.84□□□□□ -0.19
XPC-207ENST00000511155 SENP3Q9H4L4 574 aaPredicted RBP13.79□□□□□ -0.2
XPC-207ENST00000511155 MYT1Q01538 1121 aa13.76□□□□□ -0.21
XPC-207ENST00000511155 FBLN2P98095 1184 aa13.75□□□□□ -0.21
XPC-207ENST00000511155 IFT140Q96RY7 1462 aa13.74□□□□□ -0.21
XPC-207ENST00000511155 EIF4G3O43432 1585 aaKnown RBP13.73□□□□□ -0.21
XPC-207ENST00000511155 HRCP23327 699 aa13.72□□□□□ -0.21
XPC-207ENST00000511155 FBXO41Q8TF61 875 aa13.72□□□□□ -0.21
XPC-207ENST00000511155 LMTK3Q96Q04 1460 aa13.7□□□□□ -0.22
XPC-207ENST00000511155 MROH2BQ7Z745 1585 aa13.7□□□□□ -0.22
XPC-207ENST00000511155 AQRO60306 1485 aaKnown RBP eCLIP13.67□□□□□ -0.22
XPC-207ENST00000511155 CLASP1Q7Z460 1538 aa13.66□□□□□ -0.22
XPC-207ENST00000511155 ILDR2Q71H61 639 aa13.66□□□□□ -0.22
XPC-207ENST00000511155 CFTRP13569 1480 aa13.66□□□□□ -0.22
XPC-207ENST00000511155 SOCS7O14512 581 aa13.65□□□□□ -0.22
XPC-207ENST00000511155 ERCC6L2Q5T890 1561 aa13.65□□□□□ -0.22
XPC-207ENST00000511155 HECW2Q9P2P5 1572 aa13.63□□□□□ -0.23
XPC-207ENST00000511155 KIF13AQ9H1H9 1805 aa13.61□□□□□ -0.23
XPC-207ENST00000511155 GAPVD1Q14C86 1478 aa13.61□□□□□ -0.23
XPC-207ENST00000511155 TOPBP1Q92547 1522 aa13.52□□□□□ -0.25
XPC-207ENST00000511155 TARBP1Q13395 1621 aaKnown RBP13.5□□□□□ -0.25
XPC-207ENST00000511155 SYNJ1O43426 1573 aa13.48□□□□□ -0.25
XPC-207ENST00000511155 WIZO95785 1651 aa13.47□□□□□ -0.25
XPC-207ENST00000511155 SYNJ2O15056 1496 aa13.47□□□□□ -0.25
XPC-207ENST00000511155 ADGRL1O94910 1474 aa13.45□□□□□ -0.26
XPC-207ENST00000511155 SNAPC4Q5SXM2 1469 aa13.44□□□□□ -0.26
XPC-207ENST00000511155 KDM6BO15054 1643 aa13.43□□□□□ -0.26
XPC-207ENST00000511155 CHMP7Q8WUX9 453 aaPredicted RBP13.43□□□□□ -0.26
XPC-207ENST00000511155 FAM69CQ0P6D2 419 aa13.41□□□□□ -0.26
XPC-207ENST00000511155 DISP3Q9P2K9 1392 aa13.41□□□□□ -0.26
XPC-207ENST00000511155 TDRD9Q8NDG6 1382 aaKnown RBP13.4□□□□□ -0.26
XPC-207ENST00000511155 ABCC10Q5T3U5 1492 aa13.36□□□□□ -0.27
XPC-207ENST00000511155 PRDM2Q13029 1718 aa13.35□□□□□ -0.27
XPC-207ENST00000511155 RAD54L2Q9Y4B4 1467 aa13.35□□□□□ -0.27
XPC-207ENST00000511155 DNMBPQ6XZF7 1577 aa13.33□□□□□ -0.28
XPC-207ENST00000511155 POLA1P09884 1462 aaPredicted RBP13.32□□□□□ -0.28
XPC-207ENST00000511155 ABCC8Q09428 1581 aa13.3□□□□□ -0.28
XPC-207ENST00000511155 DIP2BQ9P265 1576 aa13.29□□□□□ -0.28
XPC-207ENST00000511155 MAGI1Q96QZ7 1491 aaPredicted RBP13.29□□□□□ -0.28
XPC-207ENST00000511155 TSPOAP1O95153 1857 aa13.27□□□□□ -0.29
XPC-207ENST00000511155 CEP170Q5SW79 1584 aa13.24□□□□□ -0.29
XPC-207ENST00000511155 SOGA1O94964 1423 aa13.22□□□□□ -0.29
XPC-207ENST00000511155 ZEB1P37275 1124 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms