RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 CIZ1Q9ULV3 898 aaPredicted RBP13.65□□□□□ -0.22
CHD1-206ENST00000511067 MNX1P50219 401 aaPredicted RBP13.62□□□□□ -0.23
CHD1-206ENST00000511067 GSE1Q14687 1217 aa13.6□□□□□ -0.23
CHD1-206ENST00000511067 RGL2O15211 777 aa13.59□□□□□ -0.23
CHD1-206ENST00000511067 PAK3O75914 559 aaPredicted RBP13.59□□□□□ -0.23
CHD1-206ENST00000511067 ZRANB1Q9UGI0 708 aa13.58□□□□□ -0.24
CHD1-206ENST00000511067 GABBR2O75899 941 aa13.57□□□□□ -0.24
CHD1-206ENST00000511067 NUBP1P53384 320 aa13.57□□□□□ -0.24
CHD1-206ENST00000511067 BBXQ8WY36 941 aaPredicted RBP13.56□□□□□ -0.24
CHD1-206ENST00000511067 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.52□□□□□ -0.25
CHD1-206ENST00000511067 ZNF579Q8NAF0 562 aaKnown RBP13.5□□□□□ -0.25
CHD1-206ENST00000511067 CLCN6P51797 869 aa13.49□□□□□ -0.25
CHD1-206ENST00000511067 FAM212AQ96EL1 285 aa13.48□□□□□ -0.25
CHD1-206ENST00000511067 DCAF8Q5TAQ9 597 aa13.46□□□□□ -0.25
CHD1-206ENST00000511067 HAP1P54257 671 aaPredicted RBP13.45□□□□□ -0.26
CHD1-206ENST00000511067 TSPYL2Q9H2G4 693 aaPredicted RBP13.42□□□□□ -0.26
CHD1-206ENST00000511067 PHF12Q96QT6 1004 aa13.4□□□□□ -0.26
CHD1-206ENST00000511067 TAOK2Q9UL54 1235 aa13.4□□□□□ -0.26
CHD1-206ENST00000511067 CHGAP10645 457 aaKnown RBP13.39□□□□□ -0.27
CHD1-206ENST00000511067 RASEFQ8IZ41 740 aa13.38□□□□□ -0.27
CHD1-206ENST00000511067 RNF25Q96BH1 459 aaPredicted RBP13.38□□□□□ -0.27
CHD1-206ENST00000511067 CHRM1P11229 460 aaPredicted RBP13.37□□□□□ -0.27
CHD1-206ENST00000511067 HS6ST3Q8IZP7 471 aa13.37□□□□□ -0.27
CHD1-206ENST00000511067 RIOK3O14730 519 aaKnown RBP13.35□□□□□ -0.27
CHD1-206ENST00000511067 PAXIP1Q6ZW49 1069 aaPredicted RBP13.35□□□□□ -0.27
CHD1-206ENST00000511067 VSIG10Q8N0Z9 540 aa13.34□□□□□ -0.27
CHD1-206ENST00000511067 DNAJC5Q9H3Z4 198 aa13.33□□□□□ -0.28
CHD1-206ENST00000511067 SPRYD3Q8NCJ5 442 aa13.32□□□□□ -0.28
CHD1-206ENST00000511067 DCBLD2Q96PD2 775 aa13.32□□□□□ -0.28
CHD1-206ENST00000511067 GALR2O43603 387 aaPredicted RBP13.31□□□□□ -0.28
CHD1-206ENST00000511067 CFAP44Q96MT7 982 aa13.3□□□□□ -0.28
CHD1-206ENST00000511067 CCDC61Q9Y6R9 512 aa13.3□□□□□ -0.28
CHD1-206ENST00000511067 VGFO15240 615 aaPredicted RBP13.27□□□□□ -0.29
CHD1-206ENST00000511067 POTEIP0CG38 1075 aa13.24□□□□□ -0.29
CHD1-206ENST00000511067 SGIP1Q9BQI5 828 aa13.24□□□□□ -0.29
CHD1-206ENST00000511067 MS4A3Q96HJ5 214 aa13.23□□□□□ -0.29
CHD1-206ENST00000511067 KIF12Q96FN5 646 aa13.21□□□□□ -0.29
CHD1-206ENST00000511067 PYGBP11216 843 aa13.2□□□□□ -0.3
CHD1-206ENST00000511067 STK25O00506 426 aa13.17□□□□□ -0.3
CHD1-206ENST00000511067 MAP3K13O43283 966 aa13.15□□□□□ -0.3
CHD1-206ENST00000511067 ZNF467Q7Z7K2 595 aaPredicted RBP13.13□□□□□ -0.31
CHD1-206ENST00000511067 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.12□□□□□ -0.31
CHD1-206ENST00000511067 NKX1-1Q15270 411 aaPredicted RBP13.12□□□□□ -0.31
CHD1-206ENST00000511067 ZFP91Q96JP5 570 aaPredicted RBP13.12□□□□□ -0.31
CHD1-206ENST00000511067 KDM2AQ9Y2K7 1162 aa13.12□□□□□ -0.31
CHD1-206ENST00000511067 TSHZ2Q9NRE2 1034 aa13.11□□□□□ -0.31
CHD1-206ENST00000511067 BCL11BQ9C0K0 894 aaPredicted RBP13.1□□□□□ -0.31
CHD1-206ENST00000511067 PCDHB13Q9Y5F0 798 aa13.09□□□□□ -0.31
CHD1-206ENST00000511067 BCANQ96GW7 911 aa13.08□□□□□ -0.32
CHD1-206ENST00000511067 RYDENQ9NUL5 291 aaKnown RBP13.08□□□□□ -0.32
CHD1-206ENST00000511067 STK24Q9Y6E0 443 aa13.08□□□□□ -0.32
CHD1-206ENST00000511067 GTPBP6O43824 516 aaPredicted RBP13.06□□□□□ -0.32
CHD1-206ENST00000511067 LHX8Q68G74 356 aa13.06□□□□□ -0.32
CHD1-206ENST00000511067 ASTLQ6HA08 431 aaPredicted RBP13.06□□□□□ -0.32
CHD1-206ENST00000511067 ATMINO43313 823 aaPredicted RBP13.04□□□□□ -0.32
CHD1-206ENST00000511067 PDAP1Q13442 181 aaKnown RBP13.03□□□□□ -0.32
CHD1-206ENST00000511067 TRPC6Q9Y210 931 aa13.02□□□□□ -0.33
CHD1-206ENST00000511067 TIE1P35590 1138 aa13□□□□□ -0.33
CHD1-206ENST00000511067 IFNL1Q8IU54 200 aa13□□□□□ -0.33
CHD1-206ENST00000511067 PELP1Q8IZL8 1130 aaKnown RBP13□□□□□ -0.33
CHD1-206ENST00000511067 BMP2KQ9NSY1 1161 aaPredicted RBP13□□□□□ -0.33
CHD1-206ENST00000511067 ATN1P54259 1190 aaPredicted RBP12.98□□□□□ -0.33
CHD1-206ENST00000511067 SLC39A7Q92504 469 aa12.96□□□□□ -0.33
CHD1-206ENST00000511067 PCDHB8Q9UN66 801 aa12.96□□□□□ -0.33
CHD1-206ENST00000511067 C7P10643 843 aa12.94□□□□□ -0.34
CHD1-206ENST00000511067 METRNQ9UJH8 293 aa12.94□□□□□ -0.34
CHD1-206ENST00000511067 TTLL13PA6NNM8 815 aa12.93□□□□□ -0.34
CHD1-206ENST00000511067 PSEN1P49768 467 aa12.92□□□□□ -0.34
CHD1-206ENST00000511067 TMEM106CQ9BVX2 250 aa12.89□□□□□ -0.35
CHD1-206ENST00000511067 TRIM35Q9UPQ4 493 aa12.87□□□□□ -0.35
CHD1-206ENST00000511067 POTEB2H3BUK9 544 aa12.81□□□□□ -0.36
CHD1-206ENST00000511067 SEC24BO95487 1268 aa12.8□□□□□ -0.36
CHD1-206ENST00000511067 IER5LQ5T953 404 aa12.79□□□□□ -0.36
CHD1-206ENST00000511067 MFRPQ9BY79 579 aa12.79□□□□□ -0.36
CHD1-206ENST00000511067 SOX12O15370 315 aa12.76□□□□□ -0.37
CHD1-206ENST00000511067 NBR1Q14596 966 aa12.75□□□□□ -0.37
CHD1-206ENST00000511067 CABP2Q9NPB3 220 aa12.75□□□□□ -0.37
CHD1-206ENST00000511067 POTEFA5A3E0 1075 aa12.74□□□□□ -0.37
CHD1-206ENST00000511067 NLRP6P59044 892 aa12.74□□□□□ -0.37
CHD1-206ENST00000511067 EFCAB3Q8N7B9 438 aa12.73□□□□□ -0.37
CHD1-206ENST00000511067 COLQQ9Y215 455 aaPredicted RBP12.73□□□□□ -0.37
CHD1-206ENST00000511067 GOLGA2Q08379 1002 aa12.72□□□□□ -0.37
CHD1-206ENST00000511067 OTUD5Q96G74 571 aa12.72□□□□□ -0.37
CHD1-206ENST00000511067 MAMSTRQ6ZN01 415 aa12.71□□□□□ -0.37
CHD1-206ENST00000511067 PLCG2P16885 1265 aa12.7□□□□□ -0.38
CHD1-206ENST00000511067 FBXO22Q8NEZ5 403 aa12.7□□□□□ -0.38
CHD1-206ENST00000511067 POTEJP0CG39 1038 aa12.67□□□□□ -0.38
CHD1-206ENST00000511067 MKRN3Q13064 507 aaKnown RBP12.66□□□□□ -0.38
CHD1-206ENST00000511067 P3H3Q8IVL6 736 aa12.66□□□□□ -0.38
CHD1-206ENST00000511067 SCUBE2Q9NQ36 999 aa12.66□□□□□ -0.38
CHD1-206ENST00000511067 IRX5P78411 483 aaPredicted RBP12.65□□□□□ -0.38
CHD1-206ENST00000511067 PHF8Q9UPP1 1060 aa12.65□□□□□ -0.38
CHD1-206ENST00000511067 CADPS2Q86UW7 1296 aa12.64□□□□□ -0.39
CHD1-206ENST00000511067 OCEL1Q9H607 264 aa12.63□□□□□ -0.39
CHD1-206ENST00000511067 WDR70Q9NW82 654 aa12.63□□□□□ -0.39
CHD1-206ENST00000511067 PPP1R37O75864 691 aa12.6□□□□□ -0.39
CHD1-206ENST00000511067 PRKCSHP14314 528 aaPredicted RBP12.58□□□□□ -0.4
CHD1-206ENST00000511067 TPRNQ4KMQ1 711 aa12.58□□□□□ -0.4
CHD1-206ENST00000511067 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.56□□□□□ -0.41e-7■■■□□ 16.7
CHD1-206ENST00000511067 MS4A4AQ96JQ5 239 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms