RNA–Protein interactions for RNA: ENST00000509967.6

TRIO-214, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-214ENST00000509967 VPS8Q8N3P4 1428 aa12.34□□□□□ -0.43
TRIO-214ENST00000509967 CCDC136Q96JN2 1154 aa12.34□□□□□ -0.43
TRIO-214ENST00000509967 MRS2Q9HD23 443 aa12.34□□□□□ -0.43
TRIO-214ENST00000509967 TOP2AP11388 1531 aaKnown RBP12.33□□□□□ -0.44
TRIO-214ENST00000509967 ANP32EQ9BTT0 268 aa12.33□□□□□ -0.44
TRIO-214ENST00000509967 DDRGK1Q96HY6 314 aa12.33□□□□□ -0.44
TRIO-214ENST00000509967 CHMP7Q8WUX9 453 aaPredicted RBP12.32□□□□□ -0.44
TRIO-214ENST00000509967 CCNB3Q8WWL7 1395 aa12.31□□□□□ -0.44
TRIO-214ENST00000509967 PLEKHD1A6NEE1 506 aa12.3□□□□□ -0.44
TRIO-214ENST00000509967 FAM9BQ8IZU0 186 aa12.29□□□□□ -0.44
TRIO-214ENST00000509967 PDS5BQ9NTI5 1447 aa12.26□□□□□ -0.45
TRIO-214ENST00000509967 ARID3CA6NKF2 412 aa12.25□□□□□ -0.45
TRIO-214ENST00000509967 STAG3Q9UJ98 1225 aa12.25□□□□□ -0.45
TRIO-214ENST00000509967 CCER2I3L3R5 266 aa12.25□□□□□ -0.45
TRIO-214ENST00000509967 ERICH6BQ5W0A0 696 aa12.25□□□□□ -0.45
TRIO-214ENST00000509967 CHIC2Q9UKJ5 165 aa12.25□□□□□ -0.45
TRIO-214ENST00000509967 HSP90AA1P07900 732 aaKnown RBP12.24□□□□□ -0.45
TRIO-214ENST00000509967 CARMIL1Q5VZK9 1371 aa12.24□□□□□ -0.45
TRIO-214ENST00000509967 CCDC88BA6NC98 1476 aa12.23□□□□□ -0.45
TRIO-214ENST00000509967 MROH2BQ7Z745 1585 aa12.23□□□□□ -0.45
TRIO-214ENST00000509967 BECN1Q14457 450 aa12.23□□□□□ -0.45
TRIO-214ENST00000509967 FMN1Q68DA7 1419 aa12.23□□□□□ -0.45
TRIO-214ENST00000509967 ARHGAP35Q9NRY4 1499 aa12.23□□□□□ -0.45
TRIO-214ENST00000509967 SETD5Q9C0A6 1442 aa12.21□□□□□ -0.45
TRIO-214ENST00000509967 CHMP4BQ9H444 224 aaKnown RBP12.21□□□□□ -0.45
TRIO-214ENST00000509967 GLIPR1L2Q4G1C9 344 aa12.21□□□□□ -0.45
TRIO-214ENST00000509967 CFAP53Q96M91 514 aa12.21□□□□□ -0.45
TRIO-214ENST00000509967 MYH16Q9H6N6 1097 aa12.21□□□□□ -0.45
TRIO-214ENST00000509967 CFDP1Q9UEE9 299 aaPredicted RBP12.21□□□□□ -0.46
TRIO-214ENST00000509967 CUX2O14529 1486 aa12.2□□□□□ -0.46
TRIO-214ENST00000509967 NPM2Q86SE8 214 aaKnown RBP12.2□□□□□ -0.46
TRIO-214ENST00000509967 ATAD2BQ9ULI0 1458 aa12.18□□□□□ -0.46
TRIO-214ENST00000509967 CHGAP10645 457 aaKnown RBP12.18□□□□□ -0.46
TRIO-214ENST00000509967 SUPT16HQ9Y5B9 1047 aaKnown RBP12.18□□□□□ -0.46
TRIO-214ENST00000509967 MS4A1P11836 297 aa12.18□□□□□ -0.46
TRIO-214ENST00000509967 ARID4BQ4LE39 1312 aaPredicted RBP12.17□□□□□ -0.46
TRIO-214ENST00000509967 PPP4R2Q9NY27 417 aa12.16□□□□□ -0.46
TRIO-214ENST00000509967 RRP7BPQ9NSQ0 103 aa12.16□□□□□ -0.46
TRIO-214ENST00000509967 PPM1GO15355 546 aaPredicted RBP12.16□□□□□ -0.46
TRIO-214ENST00000509967 BCL11AQ9H165 835 aa12.15□□□□□ -0.46
TRIO-214ENST00000509967 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.15□□□□□ -0.467e-7■■□□□ 14.3
TRIO-214ENST00000509967 SOGA1O94964 1423 aa12.14□□□□□ -0.47
TRIO-214ENST00000509967 KNSTRNQ9Y448 316 aa12.13□□□□□ -0.47
TRIO-214ENST00000509967 CADPSQ9ULU8 1353 aa12.13□□□□□ -0.47
TRIO-214ENST00000509967 PNNQ9H307 717 aaKnown RBP12.13□□□□□ -0.47
TRIO-214ENST00000509967 EIF4G1Q04637 1599 aaKnown RBP12.13□□□□□ -0.47
TRIO-214ENST00000509967 CARMIL2Q6F5E8 1435 aa12.12□□□□□ -0.47
TRIO-214ENST00000509967 ABCC8Q09428 1581 aa12.12□□□□□ -0.47
TRIO-214ENST00000509967 KANK1Q14678 1352 aa12.11□□□□□ -0.47
TRIO-214ENST00000509967 CFAP44Q96MT7 982 aa12.11□□□□□ -0.47
TRIO-214ENST00000509967 CARD11Q9BXL7 1154 aa12.11□□□□□ -0.47
TRIO-214ENST00000509967 SMARCA4P51532 1647 aa12.11□□□□□ -0.47
TRIO-214ENST00000509967 KDM2AQ9Y2K7 1162 aa12.11□□□□□ -0.47
TRIO-214ENST00000509967 GOLGA6L22H0YM25 854 aa12.11□□□□□ -0.47
TRIO-214ENST00000509967 RAPGEF2Q9Y4G8 1499 aa12.09□□□□□ -0.47
TRIO-214ENST00000509967 NUDCQ9Y266 331 aa12.08□□□□□ -0.48
TRIO-214ENST00000509967 CASC1Q6TDU7 716 aa12.06□□□□□ -0.48
TRIO-214ENST00000509967 ROCK2O75116 1388 aaKnown RBP12.06□□□□□ -0.48
TRIO-214ENST00000509967 TMF1P82094 1093 aa12.06□□□□□ -0.48
TRIO-214ENST00000509967 HAP1P54257 671 aaPredicted RBP12.05□□□□□ -0.48
TRIO-214ENST00000509967 TSHZ2Q9NRE2 1034 aa12.05□□□□□ -0.48
TRIO-214ENST00000509967 RSPH4AQ5TD94 716 aa12.05□□□□□ -0.48
TRIO-214ENST00000509967 WIZO95785 1651 aa12.04□□□□□ -0.48
TRIO-214ENST00000509967 NCAPD3P42695 1498 aa12.04□□□□□ -0.48
TRIO-214ENST00000509967 NCLP19338 710 aaKnown RBP12.04□□□□□ -0.48
TRIO-214ENST00000509967 CCDC18Q5T9S5 1454 aa12.02□□□□□ -0.48
TRIO-214ENST00000509967 ANKRD30AQ9BXX3 1397 aa12.02□□□□□ -0.49
TRIO-214ENST00000509967 RALBP1Q15311 655 aa12.01□□□□□ -0.49
TRIO-214ENST00000509967 CC2D2AQ9P2K1 1620 aa12.01□□□□□ -0.49
TRIO-214ENST00000509967 MAPK8IP3Q9UPT6 1336 aa12□□□□□ -0.49
TRIO-214ENST00000509967 DNAJC5BQ9UF47 199 aa12□□□□□ -0.49
TRIO-214ENST00000509967 PPP1R15AO75807 674 aaPredicted RBP12□□□□□ -0.49
TRIO-214ENST00000509967 PHLDB1Q86UU1 1377 aa12□□□□□ -0.49
TRIO-214ENST00000509967 RAB3GAP2Q9H2M9 1393 aa11.99□□□□□ -0.49
TRIO-214ENST00000509967 HDGFP51858 240 aaKnown RBP11.99□□□□□ -0.49
TRIO-214ENST00000509967 EIF3AQ14152 1382 aaKnown RBP11.98□□□□□ -0.49
TRIO-214ENST00000509967 KTN1Q86UP2 1357 aaKnown RBP11.98□□□□□ -0.49
TRIO-214ENST00000509967 SALL2Q9Y467 1007 aaPredicted RBP11.98□□□□□ -0.49
TRIO-214ENST00000509967 PTMSP20962 102 aa11.97□□□□□ -0.49
TRIO-214ENST00000509967 FTSJ3Q8IY81 847 aaKnown RBP11.97□□□□□ -0.49
TRIO-214ENST00000509967 TRIM44Q96DX7 344 aaPredicted RBP11.96□□□□□ -0.5
TRIO-214ENST00000509967 FANCD2Q9BXW9 1451 aa11.95□□□□□ -0.5
TRIO-214ENST00000509967 PDE3BQ13370 1112 aa11.95□□□□□ -0.5
TRIO-214ENST00000509967 SIN3AQ96ST3 1273 aa11.95□□□□□ -0.5
TRIO-214ENST00000509967 NOP58Q9Y2X3 529 aaKnown RBP11.95□□□□□ -0.5
TRIO-214ENST00000509967 CHMP4AQ9BY43 222 aa11.94□□□□□ -0.5
TRIO-214ENST00000509967 NBR1Q14596 966 aa11.94□□□□□ -0.5
TRIO-214ENST00000509967 BICRAQ9NZM4 1560 aa11.93□□□□□ -0.5
TRIO-214ENST00000509967 KCNH8Q96L42 1107 aa11.93□□□□□ -0.5
TRIO-214ENST00000509967 CALD1Q05682 793 aaKnown RBP11.93□□□□□ -0.5
TRIO-214ENST00000509967 TDRD9Q8NDG6 1382 aaKnown RBP11.93□□□□□ -0.5
TRIO-214ENST00000509967 CUX1P39880 1505 aa11.92□□□□□ -0.5
TRIO-214ENST00000509967 RGL3Q3MIN7 710 aa11.92□□□□□ -0.5
TRIO-214ENST00000509967 RBM19Q9Y4C8 960 aaKnown RBP11.92□□□□□ -0.5
TRIO-214ENST00000509967 TRHP20396 242 aaPredicted RBP11.92□□□□□ -0.5
TRIO-214ENST00000509967 HIRIP3Q9BW71 556 aaPredicted RBP11.91□□□□□ -0.5
TRIO-214ENST00000509967 HSPA5P11021 654 aaKnown RBP11.91□□□□□ -0.5
TRIO-214ENST00000509967 KIF21BO75037 1637 aa11.9□□□□□ -0.5
TRIO-214ENST00000509967 ERICH3Q5RHP9 1530 aa11.9□□□□□ -0.5
TRIO-214ENST00000509967 TCERG1O14776 1098 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms