RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-223ENST00000508608 DNMBPQ6XZF7 1577 aa18.91■□□□□ 0.62
CAST-223ENST00000508608 EFCAB5A4FU69 1503 aa18.91■□□□□ 0.62
CAST-223ENST00000508608 CC2D2AQ9P2K1 1620 aa18.9■□□□□ 0.62
CAST-223ENST00000508608 FANCD2Q9BXW9 1451 aa18.9■□□□□ 0.62
CAST-223ENST00000508608 SETD5Q9C0A6 1442 aa18.9■□□□□ 0.62
CAST-223ENST00000508608 CUL7Q14999 1698 aa18.89■□□□□ 0.61
CAST-223ENST00000508608 ITGAEP38570 1179 aa18.89■□□□□ 0.61
CAST-223ENST00000508608 CTTNBP2Q8WZ74 1663 aa18.87■□□□□ 0.61
CAST-223ENST00000508608 FYCO1Q9BQS8 1478 aa18.87■□□□□ 0.61
CAST-223ENST00000508608 ABCA10Q8WWZ4 1543 aa18.86■□□□□ 0.61
CAST-223ENST00000508608 PHLDB1Q86UU1 1377 aa18.85■□□□□ 0.61
CAST-223ENST00000508608 AQRO60306 1485 aaKnown RBP eCLIP18.83■□□□□ 0.612e-6■■■■□ 24.4
CAST-223ENST00000508608 MYT1Q01538 1121 aa18.83■□□□□ 0.6
CAST-223ENST00000508608 TOPBP1Q92547 1522 aa18.8■□□□□ 0.6
CAST-223ENST00000508608 CASKIN1Q8WXD9 1431 aa18.79■□□□□ 0.6
CAST-223ENST00000508608 POLA1P09884 1462 aaPredicted RBP18.79■□□□□ 0.6
CAST-223ENST00000508608 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.79■□□□□ 0.6
CAST-223ENST00000508608 FHOD3Q2V2M9 1422 aa18.76■□□□□ 0.59
CAST-223ENST00000508608 FAM50AQ14320 339 aaKnown RBP18.76■□□□□ 0.59
CAST-223ENST00000508608 WDR97A6NE52 1622 aa18.75■□□□□ 0.59
CAST-223ENST00000508608 RAD54L2Q9Y4B4 1467 aa18.75■□□□□ 0.59
CAST-223ENST00000508608 TIMELESSQ9UNS1 1208 aa18.75■□□□□ 0.59
CAST-223ENST00000508608 FMN1Q68DA7 1419 aa18.73■□□□□ 0.59
CAST-223ENST00000508608 P3H3Q8IVL6 736 aa18.7■□□□□ 0.58
CAST-223ENST00000508608 LAMC3Q9Y6N6 1575 aa18.69■□□□□ 0.58
CAST-223ENST00000508608 ATP1B4Q9UN42 357 aaPredicted RBP18.68■□□□□ 0.58
CAST-223ENST00000508608 SNAPC4Q5SXM2 1469 aa18.67■□□□□ 0.58
CAST-223ENST00000508608 SAMD9Q5K651 1589 aa18.67■□□□□ 0.58
CAST-223ENST00000508608 SUPT16HQ9Y5B9 1047 aaKnown RBP18.66■□□□□ 0.58
CAST-223ENST00000508608 FGD6Q6ZV73 1430 aa18.66■□□□□ 0.58
CAST-223ENST00000508608 THOC2Q8NI27 1593 aaKnown RBP18.66■□□□□ 0.58
CAST-223ENST00000508608 ABCA5Q8WWZ7 1642 aa18.65■□□□□ 0.58
CAST-223ENST00000508608 KIF21AQ7Z4S6 1674 aa18.65■□□□□ 0.58
CAST-223ENST00000508608 NESP48681 1621 aa18.63■□□□□ 0.57
CAST-223ENST00000508608 SIN3AQ96ST3 1273 aa18.62■□□□□ 0.57
CAST-223ENST00000508608 LRRIQ1Q96JM4 1722 aa18.61■□□□□ 0.57
CAST-223ENST00000508608 MTUS2Q5JR59 1369 aa18.6■□□□□ 0.57
CAST-223ENST00000508608 SUPT6HQ7KZ85 1726 aaKnown RBP18.6■□□□□ 0.57
CAST-223ENST00000508608 URB2Q14146 1524 aaKnown RBP18.6■□□□□ 0.57
CAST-223ENST00000508608 CCDC18Q5T9S5 1454 aa18.6■□□□□ 0.57
CAST-223ENST00000508608 PTPN23Q9H3S7 1636 aa18.58■□□□□ 0.56
CAST-223ENST00000508608 HFM1A2PYH4 1435 aa18.58■□□□□ 0.56
CAST-223ENST00000508608 EHBP1L1Q8N3D4 1523 aa18.58■□□□□ 0.56
CAST-223ENST00000508608 GRIN2BQ13224 1484 aa18.56■□□□□ 0.56
CAST-223ENST00000508608 UACAQ9BZF9 1416 aa18.56■□□□□ 0.56
CAST-223ENST00000508608 PPP1R15AO75807 674 aaPredicted RBP18.55■□□□□ 0.56
CAST-223ENST00000508608 GAPVD1Q14C86 1478 aa18.55■□□□□ 0.56
CAST-223ENST00000508608 MYOM3Q5VTT5 1437 aa18.54■□□□□ 0.56
CAST-223ENST00000508608 DDX10Q13206 875 aaKnown RBP18.54■□□□□ 0.56
CAST-223ENST00000508608 NCOA2Q15596 1464 aa18.53■□□□□ 0.56
CAST-223ENST00000508608 TONSLQ96HA7 1378 aa18.53■□□□□ 0.56
CAST-223ENST00000508608 PDS5BQ9NTI5 1447 aa18.5■□□□□ 0.55
CAST-223ENST00000508608 KCNH8Q96L42 1107 aa18.49■□□□□ 0.55
CAST-223ENST00000508608 CCER2I3L3R5 266 aa18.49■□□□□ 0.55
CAST-223ENST00000508608 UGGT2Q9NYU1 1516 aa18.48■□□□□ 0.55
CAST-223ENST00000508608 NAIPQ13075 1403 aa18.47■□□□□ 0.55
CAST-223ENST00000508608 PTPRKQ15262 1439 aa18.47■□□□□ 0.55
CAST-223ENST00000508608 TDRD9Q8NDG6 1382 aaKnown RBP18.47■□□□□ 0.55
CAST-223ENST00000508608 ARHGEF11O15085 1522 aa18.47■□□□□ 0.55
CAST-223ENST00000508608 GCC2Q8IWJ2 1684 aa18.47■□□□□ 0.55
CAST-223ENST00000508608 HECW1Q76N89 1606 aa18.46■□□□□ 0.55
CAST-223ENST00000508608 TARBP1Q13395 1621 aaKnown RBP18.44■□□□□ 0.54
CAST-223ENST00000508608 ANP32CO43423 234 aa18.44■□□□□ 0.54
CAST-223ENST00000508608 PBRM1Q86U86 1689 aa18.44■□□□□ 0.54
CAST-223ENST00000508608 TCOF1Q13428 1488 aaKnown RBP18.42■□□□□ 0.54
CAST-223ENST00000508608 AKNAQ7Z591 1439 aa18.4■□□□□ 0.54
CAST-223ENST00000508608 IQGAP2Q13576 1575 aa18.39■□□□□ 0.53
CAST-223ENST00000508608 MAGI3Q5TCQ9 1506 aa18.38■□□□□ 0.53
CAST-223ENST00000508608 KDM5BQ9UGL1 1544 aa18.36■□□□□ 0.53
CAST-223ENST00000508608 HIRIP3Q9BW71 556 aaPredicted RBP18.35■□□□□ 0.53
CAST-223ENST00000508608 TSHZ2Q9NRE2 1034 aa18.35■□□□□ 0.53
CAST-223ENST00000508608 ADAMTS12P58397 1594 aa18.35■□□□□ 0.53
CAST-223ENST00000508608 NEFLP07196 543 aa18.34■□□□□ 0.53
CAST-223ENST00000508608 MIA2Q96PC5 1412 aa18.33■□□□□ 0.53
CAST-223ENST00000508608 EPRSP07814 1512 aaKnown RBP18.33■□□□□ 0.52
CAST-223ENST00000508608 FKBP8Q14318 412 aa18.31■□□□□ 0.52
CAST-223ENST00000508608 WDR62O43379 1518 aa18.31■□□□□ 0.52
CAST-223ENST00000508608 CDK13Q14004 1512 aaKnown RBP18.25■□□□□ 0.51
CAST-223ENST00000508608 DENND4BO75064 1496 aaPredicted RBP18.25■□□□□ 0.51
CAST-223ENST00000508608 TRIM52Q96A61 297 aa18.24■□□□□ 0.51
CAST-223ENST00000508608 RRP7BPQ9NSQ0 103 aa18.24■□□□□ 0.51
CAST-223ENST00000508608 KDM6BO15054 1643 aa18.24■□□□□ 0.51
CAST-223ENST00000508608 BCANQ96GW7 911 aa18.24■□□□□ 0.51
CAST-223ENST00000508608 MRC2Q9UBG0 1479 aa18.22■□□□□ 0.51
CAST-223ENST00000508608 CHIC2Q9UKJ5 165 aa18.21■□□□□ 0.51
CAST-223ENST00000508608 DNMT1P26358 1616 aaKnown RBP18.2■□□□□ 0.5
CAST-223ENST00000508608 ROCK1Q13464 1354 aa18.2■□□□□ 0.5
CAST-223ENST00000508608 KIAA0556O60303 1618 aa18.18■□□□□ 0.5
CAST-223ENST00000508608 HSPA5P11021 654 aaKnown RBP18.18■□□□□ 0.5
CAST-223ENST00000508608 EIF4G2P78344 907 aaKnown RBP eCLIP18.18■□□□□ 0.5
CAST-223ENST00000508608 POLR1AO95602 1720 aaPredicted RBP18.17■□□□□ 0.5
CAST-223ENST00000508608 MPHOSPH9Q99550 1183 aa18.17■□□□□ 0.5
CAST-223ENST00000508608 DAPK1P53355 1430 aa18.16■□□□□ 0.5
CAST-223ENST00000508608 WASHC2AQ641Q2 1341 aa18.16■□□□□ 0.5
CAST-223ENST00000508608 CNTLNQ9NXG0 1405 aa18.16■□□□□ 0.5
CAST-223ENST00000508608 RAPGEF6Q8TEU7 1601 aa18.14■□□□□ 0.49
CAST-223ENST00000508608 IFT140Q96RY7 1462 aa18.14■□□□□ 0.49
CAST-223ENST00000508608 KIAA0586Q9BVV6 1533 aa18.14■□□□□ 0.49
CAST-223ENST00000508608 RPRD2Q5VT52 1461 aaKnown RBP18.13■□□□□ 0.49
CAST-223ENST00000508608 ITSN2Q9NZM3 1697 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms